Literature DB >> 21522468

(E)-1-Methyl-5-(3-methyl-4-chloro-phen-oxy)-3-trifluoro-meth-yl-1H-pyrazole-4-carbaldehyde O-acetyl-oxime.

Hong Dai1, Yan-Fei Shen, Jiao Chen, Hong-Lian Chen, Yong-Jun Shen.   

Abstract

In the title mol-ecule, C(15)H(13)ClF(3)N(3)O(3), the pyrazole and benzene rings form a dihedral angle of 77.6 (3)°. In the crystal, mol-ecules related by translation along the a axis are linked into chains via C-H⋯O hydrogen bonds. The crystal packing is stabilized further by weak π-π [centroid-centroid distance = 3.734 (6) Å] and dipole-dipole inter-actions [C⋯O = 3.174 (2) Å].

Entities:  

Year:  2011        PMID: 21522468      PMCID: PMC3052068          DOI: 10.1107/S1600536811006696

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of pyrazole derivatives, see: Hagiwara & Suzuki (1996 ▶); Ranatunge et al. (2004 ▶). For related structures, see: Fu et al. (2008 ▶); Li et al. (2006 ▶). For the biological activity of compounds containing an oxime ester fragment, see: Vonhoff et al. (1999 ▶); Wood et al. (1997 ▶).

Experimental

Crystal data

C15H13ClF3N3O3 M = 375.73 Orthorhombic, a = 11.951 (2) Å b = 19.549 (4) Å c = 13.726 (3) Å V = 3206.8 (11) Å3 Z = 8 Mo Kα radiation μ = 0.29 mm−1 T = 113 K 0.16 × 0.12 × 0.08 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2008 ▶) T min = 0.955, T max = 0.977 21575 measured reflections 3686 independent reflections 3208 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.115 S = 1.10 3686 reflections 229 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.33 e Å−3 Data collection: CrystalClear (Rigaku, 2008 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811006696/cv5055sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811006696/cv5055Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13ClF3N3O3F(000) = 1536
Mr = 375.73Dx = 1.557 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 7040 reflections
a = 11.951 (2) Åθ = 2.0–27.5°
b = 19.549 (4) ŵ = 0.29 mm1
c = 13.726 (3) ÅT = 113 K
V = 3206.8 (11) Å3Orthorhombic, colourless
Z = 80.16 × 0.12 × 0.08 mm
Rigaku Saturn diffractometer3686 independent reflections
Radiation source: rotating anode3208 reflections with I > 2σ(I)
confocalRint = 0.061
ω scansθmax = 27.5°, θmin = 2.0°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008)h = −12→15
Tmin = 0.955, Tmax = 0.977k = −25→24
21575 measured reflectionsl = −14→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0516P)2 + 1.0705P] where P = (Fo2 + 2Fc2)/3
3686 reflections(Δ/σ)max = 0.005
229 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.78669 (4)1.02584 (3)1.15028 (4)0.03467 (15)
F11.04265 (9)0.54780 (6)0.90733 (11)0.0422 (3)
F20.89699 (11)0.56763 (6)0.82078 (10)0.0429 (3)
F30.88936 (10)0.57911 (6)0.97538 (10)0.0415 (3)
O10.97587 (11)0.84054 (6)0.85735 (9)0.0258 (3)
O20.62455 (10)0.75817 (7)0.87263 (9)0.0254 (3)
O30.45722 (10)0.80203 (7)0.86552 (10)0.0311 (3)
N11.09611 (12)0.67936 (8)0.88946 (11)0.0254 (3)
N21.09519 (12)0.74822 (8)0.88089 (11)0.0236 (3)
N30.74122 (12)0.77434 (8)0.87076 (11)0.0233 (3)
C10.95593 (15)0.58904 (10)0.89804 (14)0.0282 (4)
C20.98845 (14)0.66220 (9)0.88872 (13)0.0221 (4)
C30.91641 (14)0.71893 (9)0.87938 (12)0.0216 (4)
C40.99049 (14)0.77333 (9)0.87439 (12)0.0214 (4)
C51.19918 (15)0.78688 (11)0.87754 (15)0.0302 (4)
H5A1.21220.80250.81220.045*
H5B1.26000.75810.89780.045*
H5C1.19390.82550.92040.045*
C60.93017 (13)0.88174 (9)0.93094 (12)0.0204 (3)
C70.89984 (14)0.94648 (9)0.90188 (13)0.0240 (4)
H70.90870.96020.83750.029*
C80.85584 (14)0.99074 (9)0.97051 (14)0.0252 (4)
H80.83531.03490.95290.030*
C90.84251 (14)0.96877 (9)1.06574 (13)0.0231 (4)
C100.87284 (13)0.90360 (9)1.09597 (13)0.0217 (4)
C110.91814 (13)0.85973 (9)1.02608 (13)0.0215 (4)
H110.94020.81581.04350.026*
C120.85611 (16)0.87976 (10)1.19861 (14)0.0293 (4)
H12A0.89180.91111.24260.044*
H12B0.88820.83511.20630.044*
H12C0.77750.87781.21280.044*
C130.79576 (14)0.71860 (9)0.87804 (13)0.0227 (4)
H130.75740.67730.88250.027*
C140.55571 (14)0.81436 (10)0.86479 (13)0.0246 (4)
C150.60736 (15)0.88311 (10)0.85610 (16)0.0309 (4)
H15A0.54960.91720.85270.046*
H15B0.65220.88500.79810.046*
H15C0.65370.89160.91190.046*
U11U22U33U12U13U23
Cl10.0395 (3)0.0301 (3)0.0343 (3)0.00681 (19)−0.00035 (19)−0.0103 (2)
F10.0363 (6)0.0256 (6)0.0646 (9)0.0072 (5)−0.0057 (6)0.0028 (6)
F20.0556 (8)0.0291 (7)0.0440 (7)−0.0061 (5)−0.0190 (6)−0.0062 (6)
F30.0475 (7)0.0326 (7)0.0446 (8)−0.0076 (5)0.0115 (6)0.0049 (6)
O10.0355 (7)0.0212 (7)0.0206 (6)0.0024 (5)0.0072 (5)0.0023 (5)
O20.0190 (6)0.0244 (7)0.0328 (7)−0.0022 (5)0.0000 (5)0.0013 (6)
O30.0209 (6)0.0340 (8)0.0382 (8)−0.0022 (5)0.0028 (5)0.0006 (6)
N10.0260 (8)0.0245 (8)0.0259 (8)0.0014 (6)−0.0005 (6)−0.0024 (6)
N20.0237 (7)0.0239 (8)0.0232 (8)−0.0007 (6)0.0008 (6)−0.0026 (6)
N30.0172 (7)0.0284 (8)0.0243 (8)−0.0022 (6)−0.0002 (6)0.0002 (6)
C10.0285 (9)0.0261 (10)0.0300 (10)0.0009 (7)−0.0038 (8)−0.0008 (8)
C20.0228 (8)0.0224 (9)0.0211 (9)0.0010 (7)−0.0004 (7)−0.0019 (7)
C30.0230 (8)0.0234 (9)0.0183 (8)0.0011 (7)−0.0002 (6)−0.0025 (7)
C40.0255 (8)0.0230 (9)0.0158 (8)0.0026 (7)0.0017 (6)−0.0015 (7)
C50.0261 (9)0.0350 (11)0.0295 (10)−0.0078 (8)0.0024 (7)−0.0038 (8)
C60.0194 (7)0.0210 (9)0.0208 (8)−0.0014 (6)0.0006 (6)−0.0018 (7)
C70.0242 (8)0.0247 (9)0.0231 (9)−0.0015 (7)−0.0013 (7)0.0052 (7)
C80.0240 (8)0.0195 (9)0.0321 (10)0.0019 (7)−0.0046 (7)0.0011 (8)
C90.0207 (8)0.0228 (9)0.0258 (9)−0.0004 (6)−0.0006 (7)−0.0054 (7)
C100.0183 (7)0.0249 (9)0.0219 (9)−0.0030 (6)−0.0015 (6)−0.0003 (7)
C110.0216 (8)0.0198 (8)0.0230 (9)−0.0002 (7)−0.0004 (7)0.0007 (7)
C120.0318 (9)0.0332 (11)0.0230 (9)0.0005 (8)0.0019 (7)−0.0009 (8)
C130.0244 (8)0.0231 (9)0.0206 (8)−0.0027 (7)−0.0002 (6)0.0000 (7)
C140.0237 (9)0.0285 (10)0.0216 (9)0.0012 (7)0.0019 (7)−0.0009 (7)
C150.0253 (9)0.0240 (10)0.0436 (12)0.0007 (7)0.0045 (8)−0.0007 (9)
Cl1—C91.7425 (18)C5—H5C0.9600
F1—C11.319 (2)C6—C71.376 (2)
F2—C11.340 (2)C6—C111.382 (2)
F3—C11.341 (2)C7—C81.383 (3)
O1—C41.346 (2)C7—H70.9300
O1—C61.403 (2)C8—C91.385 (3)
O2—C141.377 (2)C8—H80.9300
O2—N31.4299 (18)C9—C101.388 (3)
O3—C141.201 (2)C10—C111.396 (2)
N1—C21.330 (2)C10—C121.497 (2)
N1—N21.351 (2)C11—H110.9300
N2—C41.347 (2)C12—H12A0.9600
N2—C51.455 (2)C12—H12B0.9600
N3—C131.274 (2)C12—H12C0.9600
C1—C21.488 (3)C13—H130.9300
C2—C31.410 (2)C14—C151.484 (3)
C3—C41.385 (3)C15—H15A0.9600
C3—C131.442 (2)C15—H15B0.9600
C5—H5A0.9600C15—H15C0.9600
C5—H5B0.9600
C14···O3i3.174 (2)Cg···Cgii3.734 (6)
C4—O1—C6119.07 (13)C6—C7—H7120.7
C14—O2—N3113.89 (13)C8—C7—H7120.7
C2—N1—N2104.05 (14)C7—C8—C9119.51 (17)
C4—N2—N1112.11 (14)C7—C8—H8120.2
C4—N2—C5127.00 (16)C9—C8—H8120.2
N1—N2—C5120.88 (15)C8—C9—C10122.46 (17)
C13—N3—O2107.97 (14)C8—C9—Cl1118.29 (14)
F1—C1—F2107.37 (16)C10—C9—Cl1119.25 (14)
F1—C1—F3107.53 (16)C9—C10—C11117.37 (16)
F2—C1—F3105.63 (15)C9—C10—C12122.14 (16)
F1—C1—C2112.99 (15)C11—C10—C12120.48 (16)
F2—C1—C2111.69 (16)C6—C11—C10119.89 (16)
F3—C1—C2111.24 (16)C6—C11—H11120.1
N1—C2—C3113.16 (16)C10—C11—H11120.1
N1—C2—C1119.65 (15)C10—C12—H12A109.5
C3—C2—C1127.19 (16)C10—C12—H12B109.5
C4—C3—C2102.59 (15)H12A—C12—H12B109.5
C4—C3—C13129.93 (17)C10—C12—H12C109.5
C2—C3—C13127.47 (17)H12A—C12—H12C109.5
O1—C4—N2119.20 (16)H12B—C12—H12C109.5
O1—C4—C3132.45 (16)N3—C13—C3120.59 (17)
N2—C4—C3108.10 (16)N3—C13—H13119.7
N2—C5—H5A109.5C3—C13—H13119.7
N2—C5—H5B109.5O3—C14—O2115.13 (17)
H5A—C5—H5B109.5O3—C14—C15126.16 (18)
N2—C5—H5C109.5O2—C14—C15118.71 (15)
H5A—C5—H5C109.5C14—C15—H15A109.5
H5B—C5—H5C109.5C14—C15—H15B109.5
C7—C6—C11122.19 (16)H15A—C15—H15B109.5
C7—C6—O1114.96 (15)C14—C15—H15C109.5
C11—C6—O1122.83 (15)H15A—C15—H15C109.5
C6—C7—C8118.57 (17)H15B—C15—H15C109.5
C2—N1—N2—C4−0.38 (19)C2—C3—C4—N2−0.22 (18)
C2—N1—N2—C5−179.17 (16)C13—C3—C4—N2178.40 (17)
C14—O2—N3—C13−179.70 (14)C4—O1—C6—C7−168.95 (15)
N2—N1—C2—C30.2 (2)C4—O1—C6—C1112.2 (2)
N2—N1—C2—C1−179.32 (16)C11—C6—C7—C80.0 (3)
F1—C1—C2—N10.6 (2)O1—C6—C7—C8−178.92 (15)
F2—C1—C2—N1−120.56 (18)C6—C7—C8—C9−0.6 (3)
F3—C1—C2—N1121.68 (18)C7—C8—C9—C100.7 (3)
F1—C1—C2—C3−178.87 (17)C7—C8—C9—Cl1−179.94 (13)
F2—C1—C2—C360.0 (2)C8—C9—C10—C11−0.1 (3)
F3—C1—C2—C3−57.8 (2)Cl1—C9—C10—C11−179.43 (12)
N1—C2—C3—C40.0 (2)C8—C9—C10—C12−178.78 (16)
C1—C2—C3—C4179.51 (17)Cl1—C9—C10—C121.8 (2)
N1—C2—C3—C13−178.68 (17)C7—C6—C11—C100.7 (3)
C1—C2—C3—C130.8 (3)O1—C6—C11—C10179.45 (15)
C6—O1—C4—N2−112.02 (17)C9—C10—C11—C6−0.6 (2)
C6—O1—C4—C374.6 (2)C12—C10—C11—C6178.15 (16)
N1—N2—C4—O1−174.50 (14)O2—N3—C13—C3−179.26 (15)
C5—N2—C4—O14.2 (3)C4—C3—C13—N30.5 (3)
N1—N2—C4—C30.4 (2)C2—C3—C13—N3178.78 (17)
C5—N2—C4—C3179.09 (17)N3—O2—C14—O3179.52 (15)
C2—C3—C4—O1173.74 (18)N3—O2—C14—C15−0.3 (2)
C13—C3—C4—O1−7.6 (3)
D—H···AD—HH···AD···AD—H···A
C5—H5B···O3iii0.962.553.102 (2)117
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5B⋯O3i0.962.553.102 (2)117

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and selective cyclooxygenase-2 inhibitory activity of a series of novel, nitric oxide donor-containing pyrazoles.

Authors:  Ramani R Ranatunge; Michael Augustyniak; Upul K Bandarage; Richard A Earl; James L Ellis; David S Garvey; David R Janero; L Gordon Letts; Allison M Martino; Madhavi G Murty; Stewart K Richardson; Joseph D Schroeder; Matthew J Shumway; S William Tam; A Mark Trocha; Delano V Young
Journal:  J Med Chem       Date:  2004-04-22       Impact factor: 7.446

  2 in total
  1 in total

1.  1-Methyl-3-trifluoro-methyl-5-[(3-chloro-phen-yl)sulfanyl]-1H-pyrazole-4-carbaldehyde O-(4-chloro-benzo-yl)oxime.

Authors:  Hong Dai; Hai-Jun Zhang; Lei Shi; Kun-Peng Luo; Yu-Jun Shi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-19
  1 in total

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