Literature DB >> 22199837

(E)-1-{4-[Bis(4-fluoro-phen-yl)meth-yl]piperazin-1-yl}-3-(4-eth-oxy-phen-yl)prop-2-en-1-one.

Yan Zhong, Xiaoping Zhang, Bin Wu.   

Abstract

In the title mol-ecule, C(28)H(28)F(2)N(2)O(2), the ethene bond exhibits an E conformation and the n class="Chemical">piperazine ring adopts a chair conformation. The amide-N atom of the piperazine ring is almost planar (bond-angle sum = 358.8°) whereas the other N atom is clearly pyramidal (bond-angle sum = 330.5°). The dihedral angle between the fluoro-benzene rings is 76.36 (17)°. In the crystal, inversion dimers linked by pairs of C-H⋯O hydrogen bonds generate R(2) (2)(22) loops.

Entities:  

Year:  2011        PMID: 22199837      PMCID: PMC3238988          DOI: 10.1107/S160053681104801X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background to cinnamic acid derivatives, see: Zhong & Wu (2011 ▶). For further synthetic details, see: Wu et al. (2008 ▶).

Experimental

Crystal data

C28H28F2N2O2 M = 462.52 Monoclinic, a = 10.227 (2) Å b = 11.897 (2) Å c = 20.149 (4) Å β = 100.04 (3)° V = 2414.0 (8) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.30 × 0.20 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer 4698 measured reflections 4436 independent reflections 2454 reflections with I > 2σ(I) R int = 0.037 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.187 S = 1.00 4436 reflections 307 parameters 8 restraints H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S160053681104801X/hb6495sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104801X/hb6495Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H28F2N2O2F(000) = 976
Mr = 462.52Dx = 1.273 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 10.227 (2) ÅCell parameters from 25 reflections
b = 11.897 (2) Åθ = 9–13°
c = 20.149 (4) ŵ = 0.09 mm1
β = 100.04 (3)°T = 293 K
V = 2414.0 (8) Å3Block, colorless
Z = 40.30 × 0.20 × 0.20 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.037
Radiation source: fine-focus sealed tubeθmax = 25.4°, θmin = 2.0°
graphiteh = 0→12
ω/2θ scansk = 0→14
4698 measured reflectionsl = −24→23
4436 independent reflections3 standard reflections every 200 reflections
2454 reflections with I > 2σ(I) intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.060Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.187H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.1P)2 + 0.090P] where P = (Fo2 + 2Fc2)/3
4436 reflections(Δ/σ)max < 0.001
307 parametersΔρmax = 0.58 e Å3
8 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.7132 (2)0.55000 (19)0.14805 (11)0.0548 (6)
O10.56644 (19)0.84300 (16)−0.00661 (11)0.0693 (6)
F11.1646 (2)0.3281 (2)0.36341 (10)0.1089 (8)
C10.8741 (3)0.5005 (3)0.31912 (15)0.0699 (8)
H1A0.82920.55660.33820.084*
N20.7122 (2)0.71486 (19)0.04413 (12)0.0616 (6)
O21.0363 (2)1.4223 (2)0.07819 (13)0.0929 (7)
F20.3037 (2)0.1832 (2)0.22049 (13)0.1311 (10)
C20.9889 (3)0.4553 (3)0.35609 (16)0.0807 (10)
H2A1.02180.48060.39950.097*
C31.0521 (3)0.3731 (3)0.32737 (17)0.0744 (9)
C41.0074 (3)0.3339 (3)0.26406 (16)0.0733 (9)
H4A1.05280.27760.24550.088*
C50.8921 (3)0.3803 (3)0.22795 (15)0.0696 (8)
H5A0.85960.35410.18470.084*
C60.8251 (3)0.4642 (2)0.25486 (14)0.0574 (7)
C70.5877 (3)0.4256 (3)0.21433 (14)0.0620 (8)
C80.5638 (3)0.3419 (3)0.16599 (16)0.0692 (8)
H8A0.61430.34010.13180.083*
C90.4676 (3)0.2613 (3)0.16697 (19)0.0814 (10)
H9A0.45050.20740.13320.098*
C100.3985 (3)0.2628 (4)0.2187 (2)0.0887 (12)
C110.4166 (4)0.3418 (4)0.2671 (2)0.1001 (13)
H11A0.36660.34100.30150.120*
C120.5114 (3)0.4248 (4)0.26493 (17)0.0819 (10)
H12A0.52390.48050.29780.098*
C130.6959 (3)0.5127 (3)0.21574 (13)0.0617 (8)
H13A0.67200.57840.24040.074*
C140.5897 (3)0.5936 (2)0.10899 (14)0.0616 (8)
H14A0.56010.65790.13210.074*
H14B0.52140.53630.10530.074*
C150.6098 (3)0.6283 (2)0.03945 (15)0.0648 (8)
H15A0.63600.56350.01560.078*
H15B0.52710.65700.01420.078*
C160.8365 (3)0.6765 (3)0.08475 (15)0.0651 (8)
H16A0.90080.73720.08980.078*
H16B0.87210.61470.06200.078*
C170.8146 (3)0.6384 (2)0.15362 (14)0.0623 (8)
H17A0.89750.61010.17900.075*
H17B0.78690.70190.17790.075*
C180.6794 (3)0.8217 (2)0.02320 (13)0.0547 (7)
C190.7819 (3)0.9100 (2)0.03716 (14)0.0587 (7)
H19A0.87000.89020.05240.070*
C200.7490 (3)1.0179 (2)0.02810 (13)0.0584 (7)
H20A0.66011.03180.01090.070*
C210.8321 (3)1.1167 (2)0.04123 (14)0.0568 (7)
C220.7743 (3)1.2220 (2)0.02963 (16)0.0726 (9)
H22A0.68391.22610.01240.087*
C230.8435 (4)1.3196 (3)0.04231 (18)0.0823 (9)
H23A0.80031.38840.03440.099*
C240.9746 (4)1.3163 (3)0.06624 (15)0.0720 (8)
C251.0407 (3)1.2158 (3)0.07832 (16)0.0734 (8)
H25A1.13161.21410.09440.088*
C260.9671 (3)1.1144 (3)0.06569 (15)0.0724 (9)
H26A1.01021.04570.07400.087*
C271.1649 (3)1.4225 (3)0.11139 (18)0.0893 (10)
H27A1.22261.39130.08270.107*
H27B1.17271.37670.15170.107*
C281.2053 (4)1.5424 (3)0.1301 (2)0.1015 (12)
H28A1.29521.54350.15400.152*
H28B1.14751.57290.15840.152*
H28C1.19901.58690.08990.152*
U11U22U33U12U13U23
N10.0533 (13)0.0566 (14)0.0538 (13)0.0010 (11)0.0074 (10)0.0031 (11)
O10.0608 (12)0.0615 (13)0.0772 (14)0.0057 (10)−0.0114 (10)0.0069 (10)
F10.0855 (14)0.150 (2)0.0849 (14)0.0211 (14)−0.0016 (11)0.0355 (14)
C10.081 (2)0.075 (2)0.0536 (18)−0.0019 (18)0.0120 (16)−0.0040 (16)
N20.0577 (14)0.0526 (14)0.0705 (16)0.0017 (12)0.0001 (12)0.0116 (12)
O20.0900 (16)0.0816 (13)0.1009 (18)−0.0015 (12)−0.0001 (14)0.0015 (14)
F20.0902 (15)0.152 (2)0.145 (2)−0.0403 (16)0.0027 (14)0.0606 (17)
C20.084 (2)0.106 (3)0.0476 (18)−0.004 (2)0.0005 (17)0.0058 (18)
C30.062 (2)0.097 (3)0.064 (2)0.0043 (19)0.0075 (17)0.0287 (19)
C40.073 (2)0.086 (2)0.063 (2)0.0126 (18)0.0179 (17)0.0065 (18)
C50.071 (2)0.085 (2)0.0518 (17)0.0085 (18)0.0091 (15)−0.0014 (16)
C60.0575 (17)0.0670 (19)0.0490 (16)−0.0017 (15)0.0127 (13)0.0056 (14)
C70.0571 (17)0.076 (2)0.0537 (17)0.0067 (16)0.0131 (14)0.0116 (16)
C80.068 (2)0.070 (2)0.071 (2)0.0031 (17)0.0151 (16)0.0110 (17)
C90.074 (2)0.072 (2)0.091 (3)−0.0020 (19)−0.006 (2)0.0147 (19)
C100.062 (2)0.109 (3)0.092 (3)−0.013 (2)0.004 (2)0.039 (2)
C110.064 (2)0.156 (4)0.084 (3)−0.005 (3)0.022 (2)0.037 (3)
C120.069 (2)0.115 (3)0.063 (2)0.003 (2)0.0155 (17)0.0078 (19)
C130.0646 (18)0.0692 (19)0.0530 (17)0.0027 (16)0.0144 (14)−0.0034 (15)
C140.0557 (17)0.0574 (18)0.070 (2)0.0026 (14)0.0063 (14)0.0019 (15)
C150.0612 (18)0.0597 (18)0.0684 (19)−0.0020 (15)−0.0025 (15)0.0067 (15)
C160.0544 (17)0.0619 (18)0.077 (2)0.0050 (15)0.0059 (15)0.0160 (16)
C170.0557 (17)0.0654 (19)0.0620 (18)0.0022 (15)−0.0007 (14)0.0033 (15)
C180.0622 (17)0.0511 (16)0.0503 (16)0.0084 (14)0.0086 (13)0.0030 (13)
C190.0533 (16)0.0616 (19)0.0610 (18)0.0023 (15)0.0090 (14)0.0068 (14)
C200.0637 (18)0.0586 (19)0.0500 (16)0.0062 (15)0.0022 (13)0.0006 (13)
C210.0626 (18)0.0588 (18)0.0487 (16)0.0012 (15)0.0089 (13)−0.0020 (13)
C220.082 (2)0.058 (2)0.073 (2)−0.0019 (18)0.0001 (17)−0.0073 (16)
C230.0947 (18)0.061 (2)0.085 (2)0.0049 (15)−0.0021 (19)−0.0068 (17)
C240.0920 (18)0.0696 (16)0.0567 (18)−0.0033 (14)0.0191 (16)−0.0031 (15)
C250.0616 (17)0.0872 (16)0.072 (2)−0.0051 (15)0.0132 (16)−0.0012 (17)
C260.073 (2)0.071 (2)0.073 (2)0.0035 (18)0.0149 (17)−0.0009 (17)
C270.077 (2)0.111 (2)0.082 (2)−0.013 (2)0.020 (2)−0.004 (2)
C280.085 (2)0.103 (2)0.112 (3)−0.016 (2)0.007 (2)−0.015 (2)
N1—C141.462 (3)C13—H13A0.9800
N1—C171.468 (3)C14—C151.509 (4)
N1—C131.474 (3)C14—H14A0.9700
O1—C181.232 (3)C14—H14B0.9700
F1—C31.359 (3)C15—H15A0.9700
C1—C61.374 (4)C15—H15B0.9700
C1—C21.385 (4)C16—C171.513 (4)
C1—H1A0.9300C16—H16A0.9700
N2—C181.362 (3)C16—H16B0.9700
N2—C161.460 (3)C17—H17A0.9700
N2—C151.460 (3)C17—H17B0.9700
O2—C271.368 (4)C18—C191.477 (4)
O2—C241.412 (4)C19—C201.332 (4)
F2—C101.361 (4)C19—H19A0.9300
C2—C31.356 (5)C20—C211.447 (4)
C2—H2A0.9300C20—H20A0.9300
C3—C41.360 (4)C21—C261.383 (4)
C4—C51.387 (4)C21—C221.388 (4)
C4—H4A0.9300C22—C231.361 (4)
C5—C61.375 (4)C22—H22A0.9300
C5—H5A0.9300C23—C241.344 (5)
C6—C131.528 (4)C23—H23A0.9300
C7—C81.384 (4)C24—C251.374 (4)
C7—C121.388 (4)C25—C261.421 (4)
C7—C131.513 (4)C25—H25A0.9300
C8—C91.376 (4)C26—H26A0.9300
C8—H8A0.9300C27—C281.515 (5)
C9—C101.357 (5)C27—H27A0.9700
C9—H9A0.9300C27—H27B0.9700
C10—C111.344 (6)C28—H28A0.9600
C11—C121.389 (5)C28—H28B0.9600
C11—H11A0.9300C28—H28C0.9600
C12—H12A0.9300
C14—N1—C17108.6 (2)N2—C15—H15A109.6
C14—N1—C13111.9 (2)C14—C15—H15A109.6
C17—N1—C13110.0 (2)N2—C15—H15B109.6
C6—C1—C2121.4 (3)C14—C15—H15B109.6
C6—C1—H1A119.3H15A—C15—H15B108.1
C2—C1—H1A119.3N2—C16—C17110.7 (2)
C18—N2—C16127.5 (2)N2—C16—H16A109.5
C18—N2—C15120.2 (2)C17—C16—H16A109.5
C16—N2—C15111.1 (2)N2—C16—H16B109.5
C27—O2—C24116.6 (3)C17—C16—H16B109.5
C3—C2—C1118.2 (3)H16A—C16—H16B108.1
C3—C2—H2A120.9N1—C17—C16111.1 (2)
C1—C2—H2A120.9N1—C17—H17A109.4
C2—C3—F1118.6 (3)C16—C17—H17A109.4
C2—C3—C4122.7 (3)N1—C17—H17B109.4
F1—C3—C4118.8 (3)C16—C17—H17B109.4
C3—C4—C5118.2 (3)H17A—C17—H17B108.0
C3—C4—H4A120.9O1—C18—N2120.2 (3)
C5—C4—H4A120.9O1—C18—C19121.4 (2)
C6—C5—C4121.2 (3)N2—C18—C19118.5 (2)
C6—C5—H5A119.4C20—C19—C18120.4 (3)
C4—C5—H5A119.4C20—C19—H19A119.8
C1—C6—C5118.3 (3)C18—C19—H19A119.8
C1—C6—C13120.5 (3)C19—C20—C21129.2 (3)
C5—C6—C13121.1 (3)C19—C20—H20A115.4
C8—C7—C12117.3 (3)C21—C20—H20A115.4
C8—C7—C13123.0 (3)C26—C21—C22116.6 (3)
C12—C7—C13119.6 (3)C26—C21—C20124.5 (3)
C9—C8—C7122.0 (3)C22—C21—C20118.9 (3)
C9—C8—H8A119.0C23—C22—C21123.1 (3)
C7—C8—H8A119.0C23—C22—H22A118.4
C10—C9—C8118.1 (4)C21—C22—H22A118.4
C10—C9—H9A120.9C24—C23—C22119.7 (3)
C8—C9—H9A120.9C24—C23—H23A120.1
C11—C10—C9122.8 (4)C22—C23—H23A120.1
C11—C10—F2118.4 (4)C23—C24—C25121.2 (3)
C9—C10—F2118.7 (4)C23—C24—O2115.0 (3)
C10—C11—C12118.8 (4)C25—C24—O2123.8 (3)
C10—C11—H11A120.6C24—C25—C26118.6 (3)
C12—C11—H11A120.6C24—C25—H25A120.7
C7—C12—C11120.9 (4)C26—C25—H25A120.7
C7—C12—H12A119.6C21—C26—C25120.8 (3)
C11—C12—H12A119.6C21—C26—H26A119.6
N1—C13—C7113.2 (2)C25—C26—H26A119.6
N1—C13—C6111.0 (2)O2—C27—C28108.7 (3)
C7—C13—C6108.4 (2)O2—C27—H27A109.9
N1—C13—H13A108.0C28—C27—H27A109.9
C7—C13—H13A108.0O2—C27—H27B109.9
C6—C13—H13A108.0C28—C27—H27B109.9
N1—C14—C15110.6 (2)H27A—C27—H27B108.3
N1—C14—H14A109.5C27—C28—H28A109.5
C15—C14—H14A109.5C27—C28—H28B109.5
N1—C14—H14B109.5H28A—C28—H28B109.5
C15—C14—H14B109.5C27—C28—H28C109.5
H14A—C14—H14B108.1H28A—C28—H28C109.5
N2—C15—C14110.2 (2)H28B—C28—H28C109.5
C6—C1—C2—C3−0.4 (5)C17—N1—C14—C1559.8 (3)
C1—C2—C3—F1−179.8 (3)C13—N1—C14—C15−178.5 (2)
C1—C2—C3—C40.1 (5)C18—N2—C15—C14−111.9 (3)
C2—C3—C4—C5−0.2 (5)C16—N2—C15—C1456.4 (3)
F1—C3—C4—C5179.7 (3)N1—C14—C15—N2−59.3 (3)
C3—C4—C5—C60.6 (5)C18—N2—C16—C17112.2 (3)
C2—C1—C6—C50.8 (5)C15—N2—C16—C17−55.1 (3)
C2—C1—C6—C13178.1 (3)C14—N1—C17—C16−58.4 (3)
C4—C5—C6—C1−0.8 (5)C13—N1—C17—C16178.8 (2)
C4—C5—C6—C13−178.2 (3)N2—C16—C17—N156.5 (3)
C12—C7—C8—C90.7 (4)C16—N2—C18—O1−174.4 (3)
C13—C7—C8—C9177.8 (3)C15—N2—C18—O1−8.1 (4)
C7—C8—C9—C10−2.5 (5)C16—N2—C18—C195.6 (4)
C8—C9—C10—C112.6 (5)C15—N2—C18—C19171.8 (2)
C8—C9—C10—F2−179.6 (3)O1—C18—C19—C2011.4 (4)
C9—C10—C11—C12−1.0 (6)N2—C18—C19—C20−168.6 (3)
F2—C10—C11—C12−178.8 (3)C18—C19—C20—C21177.2 (3)
C8—C7—C12—C111.0 (5)C19—C20—C21—C261.1 (5)
C13—C7—C12—C11−176.2 (3)C19—C20—C21—C22−178.0 (3)
C10—C11—C12—C7−0.9 (5)C26—C21—C22—C23−1.2 (5)
C14—N1—C13—C756.2 (3)C20—C21—C22—C23178.1 (3)
C17—N1—C13—C7177.0 (2)C21—C22—C23—C241.1 (5)
C14—N1—C13—C6178.3 (2)C22—C23—C24—C25−0.1 (5)
C17—N1—C13—C6−60.8 (3)C22—C23—C24—O2−179.4 (3)
C8—C7—C13—N137.2 (4)C27—O2—C24—C23171.0 (3)
C12—C7—C13—N1−145.8 (3)C27—O2—C24—C25−8.4 (4)
C8—C7—C13—C6−86.5 (3)C23—C24—C25—C26−0.7 (5)
C12—C7—C13—C690.6 (3)O2—C24—C25—C26178.6 (3)
C1—C6—C13—N1129.6 (3)C22—C21—C26—C250.4 (4)
C5—C6—C13—N1−53.1 (4)C20—C21—C26—C25−178.8 (3)
C1—C6—C13—C7−105.5 (3)C24—C25—C26—C210.5 (4)
C5—C6—C13—C771.8 (3)C24—O2—C27—C28−170.2 (3)
D—H···AD—HH···AD···AD—H···A
C9—H9A···O1i0.932.603.422 (4)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9A⋯O1i0.932.603.422 (4)148

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-1-(4-Benzhydrylpiperazin-1-yl)-3-(3,4-dieth-oxy-phen-yl)prop-2-en-1-one ethanol monosolvate.

Authors:  Yan Zhong; Bin Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-22
  2 in total
  2 in total

1.  1-[Bis(4-fluoro-phen-yl)meth-yl]-4-[2-(2-methyl-phen-oxy)eth-yl]piperazine.

Authors:  Zhao-Hui Dai; Yan Zhong; Bin Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-17

2.  1-{4-[Bis(4-fluoro-phen-yl)meth-yl]piperazin-1-yl}ethanone.

Authors:  A S Dayananda; H S Yathirajan; Amanda C Keeley; Jerry P Jasinski
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-27
  2 in total

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