| Literature DB >> 22199745 |
Natarajan Arumugam, Nurziana Ngah, Hasnah Osman, Aisyah Saad Abdul Rahim.
Abstract
In the title compound, C(21)H(24)N(2)O(3), the mean planes of the benzene ring and the benzimidazole ring system form a dihedral angle of 69.94 (7)°. The ethyl group atoms of the ethano-ate fragment are disordered over two sets of sites, with refined occupancies of 0.742 (6) and 0.258 (6). In the crystal, there are weak C-H⋯N hydrogen bonds which connect mol-ecules into chains along the b axis. A weak inter-molecular C-H⋯π inter-action is also observed.Entities:
Year: 2011 PMID: 22199745 PMCID: PMC3238892 DOI: 10.1107/S1600536811046095
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H24N2O3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 8039 reflections |
| θ = 2.1–25.0° | |
| µ = 0.08 mm−1 | |
| β = 106.901 (1)° | Block, colourless |
| 0.52 × 0.44 × 0.32 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 3475 independent reflections |
| Radiation source: fine-focus sealed tube | 2712 reflections with |
| graphite | |
| Detector resolution: 83.66 pixels mm-1 | θmax = 25.0°, θmin = 2.1° |
| φ and ω scan | |
| Absorption correction: multi-scan ( | |
| 17688 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3475 reflections | (Δ/σ)max < 0.001 |
| 245 parameters | Δρmax = 0.35 e Å−3 |
| 3 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.22019 (14) | 0.60261 (11) | 0.83252 (9) | 0.0694 (4) | |
| O2 | 0.16647 (18) | 1.12078 (12) | 1.21044 (10) | 0.0894 (5) | |
| O3 | 0.10964 (19) | 1.17279 (12) | 1.06857 (10) | 0.0917 (5) | |
| N1 | 0.29480 (16) | 0.88252 (11) | 0.90695 (9) | 0.0562 (4) | |
| N2 | 0.36352 (14) | 0.74369 (11) | 1.00207 (8) | 0.0475 (3) | |
| C1 | 0.34617 (16) | 0.78558 (13) | 0.91776 (10) | 0.0467 (4) | |
| C2 | 0.32104 (16) | 0.82294 (12) | 1.04995 (10) | 0.0445 (4) | |
| C3 | 0.31600 (18) | 0.82949 (14) | 1.13790 (11) | 0.0551 (5) | |
| H3 | 0.3450 | 0.7729 | 1.1781 | 0.066* | |
| C4 | 0.26638 (18) | 0.92316 (14) | 1.16254 (11) | 0.0542 (4) | |
| H4 | 0.2638 | 0.9304 | 1.2213 | 0.065* | |
| C5 | 0.21963 (17) | 1.00806 (13) | 1.10246 (11) | 0.0496 (4) | |
| C6 | 0.22494 (19) | 1.00099 (13) | 1.01515 (11) | 0.0540 (5) | |
| H6 | 0.1942 | 1.0572 | 0.9748 | 0.065* | |
| C7 | 0.27727 (17) | 0.90788 (13) | 0.98941 (10) | 0.0473 (4) | |
| C8 | 0.38804 (17) | 0.72852 (14) | 0.84697 (10) | 0.0498 (4) | |
| C9 | 0.49117 (19) | 0.76994 (16) | 0.82051 (12) | 0.0606 (5) | |
| H9 | 0.5345 | 0.8316 | 0.8484 | 0.073* | |
| C10 | 0.5308 (2) | 0.72096 (19) | 0.75319 (13) | 0.0711 (6) | |
| H10 | 0.6003 | 0.7493 | 0.7358 | 0.085* | |
| C11 | 0.4666 (2) | 0.63017 (18) | 0.71234 (13) | 0.0694 (6) | |
| H11 | 0.4939 | 0.5966 | 0.6675 | 0.083* | |
| C12 | 0.3627 (2) | 0.58773 (16) | 0.73630 (11) | 0.0608 (5) | |
| H12 | 0.3196 | 0.5264 | 0.7076 | 0.073* | |
| C13 | 0.32254 (18) | 0.63726 (14) | 0.80372 (11) | 0.0517 (4) | |
| C14 | 0.1359 (2) | 0.52171 (19) | 0.78162 (15) | 0.0819 (6) | |
| H14A | 0.0981 | 0.5473 | 0.7216 | 0.123* | |
| H14B | 0.0675 | 0.5063 | 0.8084 | 0.123* | |
| H14C | 0.1852 | 0.4569 | 0.7805 | 0.123* | |
| C15 | 0.42814 (19) | 0.63962 (14) | 1.03579 (12) | 0.0601 (5) | |
| H15 | 0.4483 | 0.6042 | 0.9852 | 0.072* | |
| C16 | 0.3357 (2) | 0.56259 (16) | 1.06687 (15) | 0.0782 (6) | |
| H16A | 0.3108 | 0.5957 | 1.1151 | 0.117* | |
| H16B | 0.3800 | 0.4955 | 1.0869 | 0.117* | |
| H16C | 0.2589 | 0.5488 | 1.0179 | 0.117* | |
| C17 | 0.5563 (2) | 0.65788 (19) | 1.10606 (15) | 0.0816 (6) | |
| H17A | 0.5395 | 0.6900 | 1.1583 | 0.098* | |
| H17B | 0.5984 | 0.5884 | 1.1238 | 0.098* | |
| C18 | 0.6475 (2) | 0.7294 (2) | 1.07565 (18) | 0.1013 (8) | |
| H18A | 0.6583 | 0.7017 | 1.0208 | 0.152* | |
| H18B | 0.7308 | 0.7312 | 1.1206 | 0.152* | |
| H18C | 0.6120 | 0.8014 | 1.0660 | 0.152* | |
| C19 | 0.1636 (2) | 1.10442 (15) | 1.13428 (13) | 0.0599 (5) | |
| C20 | 0.0550 (11) | 1.2722 (4) | 1.0931 (10) | 0.103 (2) | 0.742 (6) |
| H20A | −0.0207 | 1.2560 | 1.1134 | 0.124* | 0.742 (6) |
| H20B | 0.1196 | 1.3091 | 1.1409 | 0.124* | 0.742 (6) |
| C21 | 0.0176 (5) | 1.3391 (3) | 1.0141 (4) | 0.1145 (15) | 0.742 (6) |
| H21A | −0.0225 | 1.4045 | 1.0269 | 0.172* | 0.742 (6) |
| H21B | −0.0436 | 1.3005 | 0.9667 | 0.172* | 0.742 (6) |
| H21C | 0.0938 | 1.3571 | 0.9963 | 0.172* | 0.742 (6) |
| C21A | 0.0967 (16) | 1.3540 (11) | 1.0711 (11) | 0.1145 (15) | 0.258 (6) |
| H21D | 0.0569 | 1.4175 | 1.0873 | 0.172* | 0.258 (6) |
| H21E | 0.0936 | 1.3581 | 1.0091 | 0.172* | 0.258 (6) |
| H21F | 0.1863 | 1.3495 | 1.1073 | 0.172* | 0.258 (6) |
| C20A | 0.027 (4) | 1.2591 (10) | 1.086 (3) | 0.103 (2) | 0.258 (6) |
| H20C | −0.0605 | 1.2561 | 1.0439 | 0.124* | 0.258 (6) |
| H20D | 0.0210 | 1.2562 | 1.1463 | 0.124* | 0.258 (6) |
| O1 | 0.0819 (9) | 0.0691 (9) | 0.0610 (8) | −0.0156 (7) | 0.0268 (7) | −0.0184 (6) |
| O2 | 0.1453 (15) | 0.0707 (10) | 0.0661 (9) | 0.0110 (9) | 0.0526 (10) | −0.0165 (7) |
| O3 | 0.1471 (15) | 0.0615 (9) | 0.0743 (10) | 0.0397 (9) | 0.0445 (10) | −0.0029 (8) |
| N1 | 0.0877 (11) | 0.0440 (8) | 0.0398 (8) | 0.0137 (7) | 0.0233 (7) | 0.0026 (6) |
| N2 | 0.0624 (9) | 0.0405 (7) | 0.0401 (7) | 0.0093 (6) | 0.0158 (6) | 0.0030 (6) |
| C1 | 0.0582 (10) | 0.0426 (9) | 0.0392 (9) | 0.0031 (8) | 0.0140 (7) | −0.0008 (7) |
| C2 | 0.0558 (10) | 0.0399 (9) | 0.0390 (9) | 0.0005 (7) | 0.0158 (7) | 0.0000 (7) |
| C3 | 0.0745 (12) | 0.0514 (10) | 0.0420 (9) | 0.0053 (9) | 0.0212 (8) | 0.0077 (8) |
| C4 | 0.0724 (12) | 0.0558 (11) | 0.0394 (9) | −0.0028 (9) | 0.0243 (8) | −0.0021 (8) |
| C5 | 0.0639 (11) | 0.0422 (9) | 0.0473 (10) | −0.0050 (8) | 0.0233 (8) | −0.0073 (7) |
| C6 | 0.0795 (12) | 0.0391 (9) | 0.0451 (10) | 0.0076 (8) | 0.0207 (9) | 0.0020 (7) |
| C7 | 0.0662 (11) | 0.0398 (9) | 0.0377 (9) | 0.0034 (8) | 0.0179 (8) | −0.0004 (7) |
| C8 | 0.0630 (11) | 0.0465 (10) | 0.0396 (9) | 0.0106 (8) | 0.0146 (8) | −0.0004 (7) |
| C9 | 0.0673 (12) | 0.0607 (12) | 0.0557 (11) | 0.0019 (9) | 0.0206 (9) | −0.0064 (9) |
| C10 | 0.0667 (12) | 0.0876 (15) | 0.0654 (12) | 0.0048 (11) | 0.0291 (10) | −0.0104 (11) |
| C11 | 0.0724 (13) | 0.0841 (15) | 0.0542 (11) | 0.0195 (11) | 0.0224 (10) | −0.0142 (10) |
| C12 | 0.0739 (13) | 0.0579 (11) | 0.0455 (10) | 0.0130 (10) | 0.0093 (9) | −0.0108 (8) |
| C13 | 0.0608 (11) | 0.0507 (10) | 0.0417 (9) | 0.0078 (8) | 0.0118 (8) | −0.0020 (8) |
| C14 | 0.0747 (14) | 0.0818 (15) | 0.0828 (15) | −0.0122 (12) | 0.0129 (11) | −0.0203 (12) |
| C15 | 0.0793 (13) | 0.0460 (10) | 0.0529 (11) | 0.0168 (9) | 0.0158 (9) | 0.0044 (8) |
| C16 | 0.1111 (18) | 0.0497 (11) | 0.0806 (14) | 0.0041 (11) | 0.0386 (13) | 0.0131 (10) |
| C17 | 0.0878 (15) | 0.0715 (14) | 0.0733 (14) | 0.0173 (11) | 0.0039 (11) | 0.0000 (11) |
| C18 | 0.0757 (16) | 0.101 (2) | 0.111 (2) | −0.0132 (13) | 0.0018 (13) | −0.0121 (15) |
| C19 | 0.0810 (13) | 0.0475 (10) | 0.0584 (12) | −0.0050 (9) | 0.0315 (10) | −0.0091 (9) |
| C20 | 0.153 (6) | 0.058 (2) | 0.108 (4) | 0.034 (3) | 0.053 (5) | −0.011 (2) |
| C21 | 0.117 (4) | 0.081 (2) | 0.142 (4) | 0.041 (3) | 0.031 (3) | 0.006 (3) |
| C21A | 0.117 (4) | 0.081 (2) | 0.142 (4) | 0.041 (3) | 0.031 (3) | 0.006 (3) |
| C20A | 0.153 (6) | 0.058 (2) | 0.108 (4) | 0.034 (3) | 0.053 (5) | −0.011 (2) |
| O1—C13 | 1.365 (2) | C12—C13 | 1.388 (2) |
| O1—C14 | 1.422 (2) | C12—H12 | 0.9300 |
| O2—C19 | 1.198 (2) | C14—H14A | 0.9600 |
| O3—C19 | 1.324 (2) | C14—H14B | 0.9600 |
| O3—C20A | 1.456 (5) | C14—H14C | 0.9600 |
| O3—C20 | 1.456 (4) | C15—C17 | 1.501 (3) |
| N1—C1 | 1.306 (2) | C15—C16 | 1.546 (3) |
| N1—C7 | 1.390 (2) | C15—H15 | 0.9800 |
| N2—C1 | 1.376 (2) | C16—H16A | 0.9600 |
| N2—C2 | 1.385 (2) | C16—H16B | 0.9600 |
| N2—C15 | 1.480 (2) | C16—H16C | 0.9600 |
| C1—C8 | 1.485 (2) | C17—C18 | 1.489 (3) |
| C2—C3 | 1.392 (2) | C17—H17A | 0.9700 |
| C2—C7 | 1.397 (2) | C17—H17B | 0.9700 |
| C3—C4 | 1.372 (2) | C18—H18A | 0.9600 |
| C3—H3 | 0.9300 | C18—H18B | 0.9600 |
| C4—C5 | 1.398 (2) | C18—H18C | 0.9600 |
| C4—H4 | 0.9300 | C20—C21 | 1.441 (12) |
| C5—C6 | 1.384 (2) | C20—H20A | 0.9700 |
| C5—C19 | 1.480 (2) | C20—H20B | 0.9700 |
| C6—C7 | 1.387 (2) | C21—H21A | 0.9600 |
| C6—H6 | 0.9300 | C21—H21B | 0.9600 |
| C8—C9 | 1.381 (3) | C21—H21C | 0.9600 |
| C8—C13 | 1.392 (2) | C21A—C20A | 1.440 (13) |
| C9—C10 | 1.381 (3) | C21A—H21D | 0.9600 |
| C9—H9 | 0.9300 | C21A—H21E | 0.9600 |
| C10—C11 | 1.370 (3) | C21A—H21F | 0.9600 |
| C10—H10 | 0.9300 | C20A—H20C | 0.9700 |
| C11—C12 | 1.373 (3) | C20A—H20D | 0.9700 |
| C11—H11 | 0.9300 | ||
| C13—O1—C14 | 118.20 (15) | N2—C15—C17 | 111.19 (16) |
| C19—O3—C20A | 118.4 (17) | N2—C15—C16 | 111.76 (15) |
| C19—O3—C20 | 116.7 (6) | C17—C15—C16 | 113.08 (17) |
| C1—N1—C7 | 104.53 (13) | N2—C15—H15 | 106.8 |
| C1—N2—C2 | 106.11 (12) | C17—C15—H15 | 106.8 |
| C1—N2—C15 | 125.83 (13) | C16—C15—H15 | 106.8 |
| C2—N2—C15 | 127.75 (13) | C15—C16—H16A | 109.5 |
| N1—C1—N2 | 113.72 (13) | C15—C16—H16B | 109.5 |
| N1—C1—C8 | 122.94 (14) | H16A—C16—H16B | 109.5 |
| N2—C1—C8 | 123.27 (14) | C15—C16—H16C | 109.5 |
| N2—C2—C3 | 133.33 (15) | H16A—C16—H16C | 109.5 |
| N2—C2—C7 | 105.16 (13) | H16B—C16—H16C | 109.5 |
| C3—C2—C7 | 121.52 (15) | C18—C17—C15 | 113.38 (19) |
| C4—C3—C2 | 117.02 (15) | C18—C17—H17A | 108.9 |
| C4—C3—H3 | 121.5 | C15—C17—H17A | 108.9 |
| C2—C3—H3 | 121.5 | C18—C17—H17B | 108.9 |
| C3—C4—C5 | 122.30 (15) | C15—C17—H17B | 108.9 |
| C3—C4—H4 | 118.8 | H17A—C17—H17B | 107.7 |
| C5—C4—H4 | 118.8 | C17—C18—H18A | 109.5 |
| C6—C5—C4 | 120.35 (15) | C17—C18—H18B | 109.5 |
| C6—C5—C19 | 121.18 (16) | H18A—C18—H18B | 109.5 |
| C4—C5—C19 | 118.47 (15) | C17—C18—H18C | 109.5 |
| C5—C6—C7 | 118.24 (15) | H18A—C18—H18C | 109.5 |
| C5—C6—H6 | 120.9 | H18B—C18—H18C | 109.5 |
| C7—C6—H6 | 120.9 | O2—C19—O3 | 122.81 (18) |
| C6—C7—N1 | 128.98 (15) | O2—C19—C5 | 124.93 (19) |
| C6—C7—C2 | 120.55 (14) | O3—C19—C5 | 112.26 (15) |
| N1—C7—C2 | 110.46 (14) | C21—C20—O3 | 106.8 (8) |
| C9—C8—C13 | 119.04 (15) | C21—C20—H20A | 110.4 |
| C9—C8—C1 | 119.08 (16) | O3—C20—H20A | 110.4 |
| C13—C8—C1 | 121.81 (16) | C21—C20—H20B | 110.4 |
| C10—C9—C8 | 120.85 (19) | O3—C20—H20B | 110.4 |
| C10—C9—H9 | 119.6 | H20A—C20—H20B | 108.6 |
| C8—C9—H9 | 119.6 | C20—C21—H21A | 109.5 |
| C11—C10—C9 | 119.33 (19) | C20—C21—H21B | 109.5 |
| C11—C10—H10 | 120.3 | H21A—C21—H21B | 109.5 |
| C9—C10—H10 | 120.3 | C20—C21—H21C | 109.5 |
| C10—C11—C12 | 121.27 (17) | H21A—C21—H21C | 109.5 |
| C10—C11—H11 | 119.4 | H21B—C21—H21C | 109.5 |
| C12—C11—H11 | 119.4 | C20A—C21A—H21D | 109.5 |
| C11—C12—C13 | 119.38 (18) | C20A—C21A—H21E | 109.5 |
| C11—C12—H12 | 120.3 | H21D—C21A—H21E | 109.5 |
| C13—C12—H12 | 120.3 | C20A—C21A—H21F | 109.5 |
| O1—C13—C12 | 124.40 (17) | H21D—C21A—H21F | 109.5 |
| O1—C13—C8 | 115.49 (14) | H21E—C21A—H21F | 109.5 |
| C12—C13—C8 | 120.11 (17) | C21A—C20A—O3 | 101.4 (11) |
| O1—C14—H14A | 109.5 | C21A—C20A—H20C | 111.5 |
| O1—C14—H14B | 109.5 | O3—C20A—H20C | 111.5 |
| H14A—C14—H14B | 109.5 | C21A—C20A—H20D | 111.5 |
| O1—C14—H14C | 109.5 | O3—C20A—H20D | 111.5 |
| H14A—C14—H14C | 109.5 | H20C—C20A—H20D | 109.3 |
| H14B—C14—H14C | 109.5 | ||
| C7—N1—C1—N2 | 0.4 (2) | C1—C8—C9—C10 | −178.21 (17) |
| C7—N1—C1—C8 | −176.62 (16) | C8—C9—C10—C11 | 0.0 (3) |
| C2—N2—C1—N1 | −1.2 (2) | C9—C10—C11—C12 | 0.8 (3) |
| C15—N2—C1—N1 | −175.22 (16) | C10—C11—C12—C13 | −0.5 (3) |
| C2—N2—C1—C8 | 175.86 (16) | C14—O1—C13—C12 | −10.5 (3) |
| C15—N2—C1—C8 | 1.8 (3) | C14—O1—C13—C8 | 169.60 (17) |
| C1—N2—C2—C3 | −178.75 (18) | C11—C12—C13—O1 | 179.54 (17) |
| C15—N2—C2—C3 | −4.9 (3) | C11—C12—C13—C8 | −0.6 (3) |
| C1—N2—C2—C7 | 1.37 (18) | C9—C8—C13—O1 | −178.76 (16) |
| C15—N2—C2—C7 | 175.26 (16) | C1—C8—C13—O1 | −1.7 (2) |
| N2—C2—C3—C4 | 180.00 (18) | C9—C8—C13—C12 | 1.3 (3) |
| C7—C2—C3—C4 | −0.1 (3) | C1—C8—C13—C12 | 178.40 (16) |
| C2—C3—C4—C5 | 1.5 (3) | C1—N2—C15—C17 | 111.1 (2) |
| C3—C4—C5—C6 | −1.5 (3) | C2—N2—C15—C17 | −61.7 (2) |
| C3—C4—C5—C19 | 177.90 (17) | C1—N2—C15—C16 | −121.50 (19) |
| C4—C5—C6—C7 | 0.2 (3) | C2—N2—C15—C16 | 65.7 (2) |
| C19—C5—C6—C7 | −179.26 (17) | N2—C15—C17—C18 | −55.0 (2) |
| C5—C6—C7—N1 | −178.97 (17) | C16—C15—C17—C18 | 178.28 (19) |
| C5—C6—C7—C2 | 1.2 (3) | C20A—O3—C19—O2 | −13.3 (18) |
| C1—N1—C7—C6 | −179.38 (19) | C20—O3—C19—O2 | 1.3 (5) |
| C1—N1—C7—C2 | 0.5 (2) | C20A—O3—C19—C5 | 167.2 (17) |
| N2—C2—C7—C6 | 178.70 (16) | C20—O3—C19—C5 | −178.2 (5) |
| C3—C2—C7—C6 | −1.2 (3) | C6—C5—C19—O2 | −172.8 (2) |
| N2—C2—C7—N1 | −1.19 (19) | C4—C5—C19—O2 | 7.8 (3) |
| C3—C2—C7—N1 | 178.91 (16) | C6—C5—C19—O3 | 6.7 (3) |
| N1—C1—C8—C9 | 65.8 (2) | C4—C5—C19—O3 | −172.74 (17) |
| N2—C1—C8—C9 | −110.9 (2) | C19—O3—C20—C21 | 172.8 (5) |
| N1—C1—C8—C13 | −111.2 (2) | C20A—O3—C20—C21 | −86 (10) |
| N2—C1—C8—C13 | 72.0 (2) | C19—O3—C20A—C21A | 119 (2) |
| C13—C8—C9—C10 | −1.1 (3) | C20—O3—C20A—C21A | 33 (6) |
| H··· | ||||
| C12—H12···N1i | 0.93 | 2.56 | 3.471 (2) | 165 |
| C20A—H20C···Cgii | 0.97 | 2.90 | 3.71 (4) | 141 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the N1/N2/C1/C2/C7 ring.
| H⋯ | ||||
|---|---|---|---|---|
| C12—H12⋯N1i | 0.93 | 2.56 | 3.471 (2) | 165 |
| C20 | 0.97 | 2.90 | 3.71 (4) | 141 |
Symmetry codes: (i) ; (ii) .