Literature DB >> 22199698

2-(2-Meth-oxy-phen-oxy)-3-nitro-pyridine.

Shah Bakhtiar Nasir, Zainal Abidin Fairuz, Zanariah Abdullah, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C(12)H(10)N(2)O(4), the pyridine and benzene rings are almost orthogonal, forming a dihedral angle of 86.63 (6)°. Each of the nitro [O-N-C-C torsion angle = -6.45 (19)°] and meth-oxy [C-O-C-C torsion angle = 179.69 (11)°] groups is almost coplanar with the ring to which it is connected. Mol-ecules are consolidated in the crystal structure via C-H⋯O inter-actions, forming a three-dimensional network.

Entities:  

Year:  2011        PMID: 22199698      PMCID: PMC3238845          DOI: 10.1107/S1600536811045247

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of a related nitro-pyridine derivative, see: Nasir et al. (2010 ▶).

Experimental

Crystal data

C12H10N2O4 M = 246.22 Monoclinic, a = 7.5017 (7) Å b = 7.1542 (6) Å c = 20.6369 (18) Å β = 91.878 (1)° V = 1106.96 (17) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 100 K 0.35 × 0.30 × 0.20 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.961, T max = 0.978 10026 measured reflections 2551 independent reflections 2103 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.103 S = 1.03 2551 reflections 164 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811045247/hb6471sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811045247/hb6471Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811045247/hb6471Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H10N2O4F(000) = 512
Mr = 246.22Dx = 1.477 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3556 reflections
a = 7.5017 (7) Åθ = 2.9–28.2°
b = 7.1542 (6) ŵ = 0.11 mm1
c = 20.6369 (18) ÅT = 100 K
β = 91.878 (1)°Block, colourless
V = 1106.96 (17) Å30.35 × 0.30 × 0.20 mm
Z = 4
Bruker SMART APEX CCD diffractometer2551 independent reflections
Radiation source: fine-focus sealed tube2103 reflections with I > 2σ(I)
graphiteRint = 0.029
ω scansθmax = 27.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.961, Tmax = 0.978k = −9→9
10026 measured reflectionsl = −23→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.053P)2 + 0.3772P] where P = (Fo2 + 2Fc2)/3
2551 reflections(Δ/σ)max < 0.001
164 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.36667 (12)0.22735 (12)0.12197 (4)0.0182 (2)
O20.71311 (12)0.13613 (14)0.12236 (4)0.0206 (2)
O30.20311 (15)0.16998 (15)0.01073 (5)0.0316 (3)
O40.12030 (15)0.40621 (16)−0.04768 (5)0.0323 (3)
N10.47657 (14)0.52273 (15)0.13850 (5)0.0190 (2)
N20.20013 (15)0.33758 (17)−0.00044 (5)0.0207 (3)
C10.38285 (16)0.40572 (17)0.10136 (6)0.0150 (3)
C20.29836 (16)0.46433 (18)0.04319 (6)0.0171 (3)
C30.30952 (18)0.6508 (2)0.02541 (7)0.0235 (3)
H30.25190.6939−0.01350.028*
C40.4052 (2)0.7729 (2)0.06477 (7)0.0262 (3)
H40.41400.90170.05410.031*
C50.48791 (18)0.70151 (19)0.12028 (7)0.0236 (3)
H50.55680.78420.14700.028*
C60.45474 (17)0.18151 (17)0.18111 (6)0.0165 (3)
C70.35938 (17)0.17835 (18)0.23680 (6)0.0198 (3)
H70.23820.21700.23600.024*
C80.44250 (18)0.11778 (19)0.29441 (7)0.0217 (3)
H80.37870.11620.33340.026*
C90.61791 (18)0.06017 (18)0.29447 (6)0.0196 (3)
H90.67360.01690.33370.024*
C100.71438 (17)0.06438 (17)0.23835 (6)0.0179 (3)
H100.83540.02500.23920.022*
C110.63311 (17)0.12668 (17)0.18063 (6)0.0160 (3)
C120.89664 (19)0.0810 (2)0.12152 (7)0.0250 (3)
H12A0.93840.08820.07710.038*
H12B0.9088−0.04770.13740.038*
H12C0.96830.16460.14950.038*
U11U22U33U12U13U23
O10.0237 (5)0.0134 (4)0.0169 (5)−0.0025 (4)−0.0074 (4)0.0026 (3)
O20.0236 (5)0.0230 (5)0.0152 (5)0.0025 (4)−0.0015 (4)0.0007 (4)
O30.0442 (6)0.0264 (6)0.0235 (6)−0.0106 (5)−0.0096 (5)0.0015 (4)
O40.0353 (6)0.0440 (7)0.0170 (5)0.0105 (5)−0.0087 (4)0.0004 (5)
N10.0201 (5)0.0141 (5)0.0226 (6)−0.0003 (4)−0.0027 (4)−0.0002 (4)
N20.0199 (5)0.0292 (7)0.0129 (5)0.0011 (5)−0.0003 (4)0.0006 (5)
C10.0153 (6)0.0132 (6)0.0165 (6)0.0011 (4)0.0009 (5)0.0009 (5)
C20.0167 (6)0.0196 (7)0.0149 (6)0.0013 (5)0.0006 (5)0.0009 (5)
C30.0247 (7)0.0230 (7)0.0230 (7)0.0054 (5)0.0025 (5)0.0084 (6)
C40.0311 (7)0.0146 (6)0.0332 (8)0.0021 (5)0.0042 (6)0.0075 (6)
C50.0244 (7)0.0144 (6)0.0318 (8)−0.0016 (5)−0.0009 (6)−0.0009 (6)
C60.0222 (6)0.0105 (6)0.0162 (6)−0.0025 (5)−0.0060 (5)0.0009 (5)
C70.0194 (6)0.0181 (6)0.0216 (7)−0.0023 (5)−0.0020 (5)0.0006 (5)
C80.0253 (7)0.0216 (7)0.0182 (7)−0.0050 (5)0.0004 (5)0.0020 (5)
C90.0272 (7)0.0156 (6)0.0156 (6)−0.0040 (5)−0.0055 (5)0.0027 (5)
C100.0219 (6)0.0126 (6)0.0189 (7)−0.0003 (5)−0.0041 (5)0.0004 (5)
C110.0233 (6)0.0096 (6)0.0151 (6)−0.0019 (5)−0.0018 (5)0.0002 (5)
C120.0243 (7)0.0282 (8)0.0226 (7)0.0043 (6)0.0004 (5)0.0000 (6)
O1—C11.3518 (15)C5—H50.9500
O1—C61.4075 (14)C6—C71.3735 (18)
O2—C111.3630 (15)C6—C111.3947 (18)
O2—C121.4329 (16)C7—C81.3934 (18)
O3—N21.2211 (16)C7—H70.9500
O4—N21.2295 (14)C8—C91.3788 (19)
N1—C11.3217 (16)C8—H80.9500
N1—C51.3367 (17)C9—C101.3860 (19)
N2—C21.4604 (17)C9—H90.9500
C1—C21.4031 (17)C10—C111.3935 (17)
C2—C31.3871 (19)C10—H100.9500
C3—C41.378 (2)C12—H12A0.9800
C3—H30.9500C12—H12B0.9800
C4—C51.383 (2)C12—H12C0.9800
C4—H40.9500
C1—O1—C6116.64 (9)C11—C6—O1118.84 (11)
C11—O2—C12116.62 (10)C6—C7—C8119.22 (12)
C1—N1—C5118.72 (12)C6—C7—H7120.4
O3—N2—O4123.18 (12)C8—C7—H7120.4
O3—N2—C2119.18 (11)C9—C8—C7119.61 (12)
O4—N2—C2117.63 (12)C9—C8—H8120.2
N1—C1—O1117.84 (11)C7—C8—H8120.2
N1—C1—C2121.57 (12)C8—C9—C10121.14 (12)
O1—C1—C2120.57 (11)C8—C9—H9119.4
C3—C2—C1118.97 (12)C10—C9—H9119.4
C3—C2—N2117.89 (11)C9—C10—C11119.70 (12)
C1—C2—N2123.14 (11)C9—C10—H10120.1
C4—C3—C2119.24 (13)C11—C10—H10120.1
C4—C3—H3120.4O2—C11—C10125.24 (12)
C2—C3—H3120.4O2—C11—C6116.28 (11)
C3—C4—C5117.71 (13)C10—C11—C6118.47 (12)
C3—C4—H4121.1O2—C12—H12A109.5
C5—C4—H4121.1O2—C12—H12B109.5
N1—C5—C4123.76 (13)H12A—C12—H12B109.5
N1—C5—H5118.1O2—C12—H12C109.5
C4—C5—H5118.1H12A—C12—H12C109.5
C7—C6—C11121.84 (11)H12B—C12—H12C109.5
C7—C6—O1119.13 (11)
C5—N1—C1—O1−177.26 (11)C3—C4—C5—N1−1.7 (2)
C5—N1—C1—C21.09 (19)C1—O1—C6—C798.47 (13)
C6—O1—C1—N1−1.12 (16)C1—O1—C6—C11−86.40 (14)
C6—O1—C1—C2−179.48 (11)C11—C6—C7—C8−0.36 (19)
N1—C1—C2—C3−1.92 (19)O1—C6—C7—C8174.62 (11)
O1—C1—C2—C3176.38 (11)C6—C7—C8—C9−0.73 (19)
N1—C1—C2—N2177.31 (11)C7—C8—C9—C101.1 (2)
O1—C1—C2—N2−4.40 (18)C8—C9—C10—C11−0.40 (19)
O3—N2—C2—C3172.79 (12)C12—O2—C11—C10−1.44 (18)
O4—N2—C2—C3−6.00 (17)C12—O2—C11—C6179.69 (11)
O3—N2—C2—C1−6.45 (19)C9—C10—C11—O2−179.52 (11)
O4—N2—C2—C1174.76 (12)C9—C10—C11—C6−0.68 (18)
C1—C2—C3—C40.92 (19)C7—C6—C11—O2−179.99 (11)
N2—C2—C3—C4−178.35 (12)O1—C6—C11—O25.02 (16)
C2—C3—C4—C50.8 (2)C7—C6—C11—C101.06 (18)
C1—N1—C5—C40.8 (2)O1—C6—C11—C10−173.93 (11)
D—H···AD—HH···AD···AD—H···A
C3—H3···O2i0.952.583.4085 (17)146
C9—H9···O4ii0.952.553.2659 (16)132
C12—H12a···O3iii0.982.523.3560 (18)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O2i0.952.583.4085 (17)146
C9—H9⋯O4ii0.952.553.2659 (16)132
C12—H12a⋯O3iii0.982.523.3560 (18)143

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(4-Meth-oxy-phen-oxy)-3-nitro-pyridine.

Authors:  Shah Bakhtiar Nasir; Zanariah Abdullah; Zainal A Fairuz; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-28
  2 in total

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