Literature DB >> 22199619

Dibromido(2,9-dimethyl-1,10-phenanthroline-κN,N')cadmium.

Ismail Warad, Ahmed Boshaala, Saud I Al-Resayes, Salem S Al-Deyab, Mohamed Rzaigui.   

Abstract

In the title complex, [CdBr(2)(C(14)H(12)N(2))], the Cd(II) ion is tetra-coordinated by two N atoms of the bidentate 2,9-dimethyl-1,10-phenanthroline ligand and two bromide ions in a substanti-ally distorted CdN(2)Br(2) tetra-hedral geometry. In the crystal, inversion dimers linked by pairs of weak C-H⋯Br bonds generate R(2) (2)(14) loops. Aromatic π-π stacking [shortest centroid-centroid separation = 3.633 (2) Å] inter-actions occur within, and also link, the dimers into chains propagating parallel to [100].

Entities:  

Year:  2011        PMID: 22199619      PMCID: PMC3238742          DOI: 10.1107/S1600536811050069

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Preston & Kennard (1969 ▶); Lange et al. (2000 ▶); Alizadeh et al. (2009 ▶); Wang & Zhong (2009 ▶); Warad et al. (2011 ▶). For background to π–π stacking inter­actions, see: Janiak (2000 ▶).

Experimental

Crystal data

[CdBr2(C14H12N2)] M = 480.48 Monoclinic, a = 7.889 (4) Å b = 10.519 (3) Å c = 18.712 (2) Å β = 97.69 (3)° V = 1538.8 (9) Å3 Z = 4 Ag Kα radiation λ = 0.56087 Å μ = 3.53 mm−1 T = 293 K 0.30 × 0.25 × 0.17 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: multi-scan (SORTAV; Blessing, 1995 ▶) T min = 0.469, T max = 0.534 9813 measured reflections 7516 independent reflections 2986 reflections with I > 2σ(I) R int = 0.029 2 standard reflections every 120 min intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.177 S = 0.98 7516 reflections 174 parameters H-atom parameters constrained Δρmax = 1.41 e Å−3 Δρmin = −0.93 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶) and DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811050069/hb6522sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050069/hb6522Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CdBr2(C14H12N2)]F(000) = 912
Mr = 480.48Dx = 2.074 Mg m3
Monoclinic, P21/cAg Kα radiation, λ = 0.56087 Å
a = 7.889 (4) ÅCell parameters from 25 reflections
b = 10.519 (3) Åθ = 9–11°
c = 18.712 (2) ŵ = 3.53 mm1
β = 97.69 (3)°T = 293 K
V = 1538.8 (9) Å3Prism, colorless
Z = 40.30 × 0.25 × 0.17 mm
Enraf–Nonius CAD-4 diffractometer2986 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.029
graphiteθmax = 28.0°, θmin = 2.1°
non–profiled ω scansh = −13→13
Absorption correction: multi-scan (SORTAV; Blessing, 1995)k = −2→17
Tmin = 0.469, Tmax = 0.534l = −2→31
9813 measured reflections2 standard reflections every 120 min
7516 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.177H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0769P)2] where P = (Fo2 + 2Fc2)/3
7516 reflections(Δ/σ)max = 0.001
174 parametersΔρmax = 1.41 e Å3
0 restraintsΔρmin = −0.93 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.71490 (5)0.28442 (4)0.39225 (2)0.05032 (14)
Br10.44548 (9)0.32557 (8)0.30765 (4)0.0833 (2)
Br20.93295 (10)0.45768 (6)0.39288 (4)0.0766 (2)
N10.6886 (5)0.1781 (4)0.4972 (2)0.0422 (8)
N20.8075 (5)0.0829 (4)0.3769 (2)0.0409 (8)
C10.6270 (6)0.2257 (5)0.5546 (3)0.0501 (11)
C20.6113 (7)0.1479 (6)0.6149 (3)0.0561 (13)
H20.56920.18190.65490.067*
C30.6578 (7)0.0234 (6)0.6146 (3)0.0553 (14)
H30.6462−0.02780.65410.066*
C40.7229 (6)−0.0278 (5)0.5551 (3)0.0462 (11)
C50.7760 (6)−0.1572 (5)0.5505 (3)0.0562 (13)
H50.7680−0.21130.58920.067*
C60.8373 (7)−0.2031 (5)0.4918 (3)0.0530 (12)
H60.8724−0.28750.49100.064*
C70.8489 (6)−0.1248 (4)0.4314 (3)0.0412 (10)
C80.9065 (6)−0.1674 (5)0.3680 (3)0.0511 (12)
H80.9394−0.25180.36440.061*
C90.9152 (7)−0.0873 (5)0.3119 (3)0.0535 (12)
H90.9543−0.11660.27020.064*
C100.8653 (7)0.0387 (5)0.3170 (3)0.0518 (12)
C110.7981 (5)0.0045 (4)0.4331 (2)0.0375 (9)
C120.7359 (5)0.0532 (4)0.4963 (2)0.0389 (10)
C130.5798 (8)0.3629 (6)0.5518 (3)0.0663 (16)
H13A0.67770.41290.57040.100*
H13B0.48940.37730.58050.100*
H13C0.54210.38700.50280.100*
C140.8682 (10)0.1297 (6)0.2557 (3)0.079 (2)
H14A0.79660.20130.26240.119*
H14B0.82660.08790.21120.119*
H14C0.98330.15820.25430.119*
U11U22U33U12U13U23
Cd10.0656 (3)0.03953 (19)0.0473 (2)0.00785 (18)0.01316 (17)0.00728 (16)
Br10.0686 (4)0.1170 (6)0.0645 (4)0.0160 (4)0.0094 (3)0.0320 (4)
Br20.1037 (5)0.0481 (3)0.0791 (4)−0.0126 (3)0.0164 (4)0.0111 (3)
N10.047 (2)0.042 (2)0.0384 (19)−0.0033 (17)0.0057 (16)0.0018 (16)
N20.045 (2)0.0379 (19)0.0400 (19)0.0016 (16)0.0067 (17)0.0003 (16)
C10.041 (2)0.058 (3)0.052 (3)−0.002 (2)0.009 (2)−0.005 (3)
C20.050 (3)0.076 (4)0.044 (3)−0.004 (3)0.013 (2)−0.006 (3)
C30.049 (3)0.076 (4)0.042 (3)−0.010 (3)0.009 (2)0.012 (3)
C40.039 (2)0.056 (3)0.043 (2)−0.005 (2)0.006 (2)0.011 (2)
C50.054 (3)0.052 (3)0.061 (3)−0.003 (3)0.004 (3)0.021 (3)
C60.054 (3)0.039 (2)0.066 (3)0.000 (2)0.005 (3)0.013 (2)
C70.036 (2)0.037 (2)0.050 (3)−0.0016 (18)0.003 (2)0.006 (2)
C80.051 (3)0.038 (2)0.064 (3)0.007 (2)0.007 (2)−0.009 (2)
C90.062 (3)0.047 (3)0.053 (3)0.003 (2)0.011 (2)−0.008 (2)
C100.063 (3)0.051 (3)0.042 (2)0.000 (2)0.010 (2)−0.006 (2)
C110.033 (2)0.038 (2)0.040 (2)−0.0021 (17)−0.0001 (18)−0.0001 (18)
C120.034 (2)0.039 (2)0.042 (2)−0.0026 (18)−0.0004 (18)0.0068 (19)
C130.082 (4)0.057 (3)0.065 (4)0.008 (3)0.026 (3)−0.010 (3)
C140.129 (6)0.060 (4)0.057 (3)0.013 (4)0.041 (4)0.006 (3)
Cd1—N22.273 (4)C5—H50.9300
Cd1—N12.294 (4)C6—C71.412 (7)
Cd1—Br22.5050 (10)C6—H60.9300
Cd1—Br12.5120 (13)C7—C81.399 (7)
N1—C11.334 (6)C7—C111.419 (6)
N1—C121.367 (6)C8—C91.355 (8)
N2—C111.347 (6)C8—H80.9300
N2—C101.348 (6)C9—C101.389 (7)
C1—C21.412 (8)C9—H90.9300
C1—C131.489 (8)C10—C141.496 (8)
C2—C31.360 (8)C11—C121.433 (6)
C2—H20.9300C13—H13A0.9600
C3—C41.395 (7)C13—H13B0.9600
C3—H30.9300C13—H13C0.9600
C4—C121.405 (6)C14—H14A0.9600
C4—C51.430 (8)C14—H14B0.9600
C5—C61.347 (8)C14—H14C0.9600
N2—Cd1—N173.81 (14)C8—C7—C6123.7 (4)
N2—Cd1—Br2116.56 (10)C8—C7—C11116.8 (4)
N1—Cd1—Br2119.43 (10)C6—C7—C11119.5 (5)
N2—Cd1—Br1109.88 (10)C9—C8—C7120.9 (5)
N1—Cd1—Br1117.25 (10)C9—C8—H8119.6
Br2—Cd1—Br1113.59 (4)C7—C8—H8119.6
C1—N1—C12120.1 (4)C8—C9—C10119.7 (5)
C1—N1—Cd1126.2 (3)C8—C9—H9120.1
C12—N1—Cd1113.6 (3)C10—C9—H9120.1
C11—N2—C10119.9 (4)N2—C10—C9121.1 (5)
C11—N2—Cd1114.8 (3)N2—C10—C14117.3 (5)
C10—N2—Cd1125.2 (3)C9—C10—C14121.6 (5)
N1—C1—C2120.4 (5)N2—C11—C7121.6 (4)
N1—C1—C13116.8 (5)N2—C11—C12119.1 (4)
C2—C1—C13122.8 (5)C7—C11—C12119.4 (4)
C3—C2—C1120.1 (5)N1—C12—C4121.5 (4)
C3—C2—H2119.9N1—C12—C11118.6 (4)
C1—C2—H2119.9C4—C12—C11119.8 (4)
C2—C3—C4120.2 (5)C1—C13—H13A109.5
C2—C3—H3119.9C1—C13—H13B109.5
C4—C3—H3119.9H13A—C13—H13B109.5
C3—C4—C12117.7 (5)C1—C13—H13C109.5
C3—C4—C5123.9 (5)H13A—C13—H13C109.5
C12—C4—C5118.5 (5)H13B—C13—H13C109.5
C6—C5—C4122.0 (5)C10—C14—H14A109.5
C6—C5—H5119.0C10—C14—H14B109.5
C4—C5—H5119.0H14A—C14—H14B109.5
C5—C6—C7120.8 (5)C10—C14—H14C109.5
C5—C6—H6119.6H14A—C14—H14C109.5
C7—C6—H6119.6H14B—C14—H14C109.5
N2—Cd1—N1—C1−178.5 (4)C7—C8—C9—C10−0.4 (8)
Br2—Cd1—N1—C169.7 (4)C11—N2—C10—C90.3 (8)
Br1—Cd1—N1—C1−74.1 (4)Cd1—N2—C10—C9−178.3 (4)
N2—Cd1—N1—C12−1.4 (3)C11—N2—C10—C14178.4 (5)
Br2—Cd1—N1—C12−113.2 (3)Cd1—N2—C10—C14−0.2 (7)
Br1—Cd1—N1—C12103.0 (3)C8—C9—C10—N2−0.3 (8)
N1—Cd1—N2—C111.3 (3)C8—C9—C10—C14−178.4 (6)
Br2—Cd1—N2—C11116.6 (3)C10—N2—C11—C70.4 (7)
Br1—Cd1—N2—C11−112.4 (3)Cd1—N2—C11—C7179.1 (3)
N1—Cd1—N2—C10180.0 (4)C10—N2—C11—C12−179.9 (4)
Br2—Cd1—N2—C10−64.7 (4)Cd1—N2—C11—C12−1.1 (5)
Br1—Cd1—N2—C1066.3 (4)C8—C7—C11—N2−1.0 (6)
C12—N1—C1—C20.5 (7)C6—C7—C11—N2179.8 (4)
Cd1—N1—C1—C2177.4 (4)C8—C7—C11—C12179.2 (4)
C12—N1—C1—C13179.4 (5)C6—C7—C11—C120.0 (6)
Cd1—N1—C1—C13−3.6 (6)C1—N1—C12—C4−0.6 (7)
N1—C1—C2—C3−0.5 (8)Cd1—N1—C12—C4−177.8 (3)
C13—C1—C2—C3−179.5 (5)C1—N1—C12—C11178.7 (4)
C1—C2—C3—C40.7 (8)Cd1—N1—C12—C111.4 (5)
C2—C3—C4—C12−0.8 (7)C3—C4—C12—N10.7 (7)
C2—C3—C4—C5179.5 (5)C5—C4—C12—N1−179.5 (4)
C3—C4—C5—C6179.6 (5)C3—C4—C12—C11−178.5 (4)
C12—C4—C5—C6−0.1 (8)C5—C4—C12—C111.2 (7)
C4—C5—C6—C7−1.1 (8)N2—C11—C12—N1−0.2 (6)
C5—C6—C7—C8−178.1 (5)C7—C11—C12—N1179.6 (4)
C5—C6—C7—C111.1 (7)N2—C11—C12—C4179.0 (4)
C6—C7—C8—C9−179.8 (5)C7—C11—C12—C4−1.2 (6)
C11—C7—C8—C91.0 (7)
D—H···AD—HH···AD···AD—H···A
C5—H5···Br1i0.932.983.805 (5)149
Cd1—N22.273 (4)
Cd1—N12.294 (4)
Cd1—Br22.5050 (10)
Cd1—Br12.5120 (13)
N2—Cd1—N173.81 (14)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯Br1i0.932.983.805 (5)149

Symmetry code: (i) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  Copper(II) and copper(I) complexes with an open-chain N4 Schiff base ligand modeling CuZn superoxide dismutase: structural and spectroscopic characterization and kinetics of electron transfer.

Authors:  J Lange; H Elias; H Paulus; J Müller; U Weser
Journal:  Inorg Chem       Date:  2000-07-24       Impact factor: 5.165

4.  Dichlorido(2,9-dimethyl-1,10-phenanthroline-κN,N')copper(II).

Authors:  B S Wang; H Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-05

5.  Dibromido(2,9-dimethyl-1,10-phenanthroline-κN,N')mercury(II).

Authors:  Robabeh Alizadeh; Amene Heidari; Roya Ahmadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-02

6.  (2,9-Dimethyl-1,10-phenanthroline-κN,N')diiodidocadmium.

Authors:  Ismail Warad; Ahmed Boshaala; Saud I Al-Resayes; Salem S Al-Deyab; Mohamed Rzaigui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-02
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.