Literature DB >> 22199583

catena-Poly[[[cis-aqua-dibromido-cobalt(II)]-μ-(pyrazine-2-carb-oxy-lic acid)-κN,O:N] monohydrate].

Christopher Dares1, Rene Fournier, A B P Lever.   

Abstract

The title compound, {[CoBr(2)(C(5)H(4)N(2)O(2))(H(2)O)]·H(2)O}(n), is a one-dimensional coordination polymer which crystallizes as a monohydrate. The asymmetric unit contains one Co(II) atom in a distorted octa-hedral geometry, forming a chain parallel to [010] with the pyrazine carb-oxy-lic acid ligands coordinating on one side in a bidentate fashion through one N and one O atom, and in a monodentate fashion through a N atom, with N atoms trans, and with both ligands lying in the same plane. The bromide atoms are cis to each other, while a water mol-ecule occupies the final octa-hedral coordination site. The chains are linked together though an O-H⋯Br hydrogen bonding network, and are further stabilized by an O-H⋯Br and O-H⋯O hydrogen-bonding framework with the solvent water mol-ecule.

Entities:  

Year:  2011        PMID: 22199583      PMCID: PMC3238706          DOI: 10.1107/S1600536811048628

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of related compounds, see: Gao et al. (2007 ▶) and references therein. For other examples of linear coordin­ation polymers utilizing pyrazine derivatives, see: Mao et al. (1996 ▶).

Experimental

Crystal data

[CoBr2(C5H4N2O2)(H2O)]·H2O M = 378.88 Monoclinic, a = 6.9367 (3) Å b = 13.9983 (3) Å c = 11.1446 (5) Å β = 106.043 (2)° V = 1040.02 (7) Å3 Z = 4 Mo Kα radiation μ = 9.32 mm−1 T = 150 K 0.18 × 0.16 × 0.06 mm

Data collection

Bruker–Nonius KappaCCD diffractometer Absorption correction: multi-scan (SORTAV; Blessing, 1995 ▶) T min = 0.399, T max = 0.962 7275 measured reflections 2375 independent reflections 2013 reflections with I > 2σ(I) R int = 0.055

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.088 S = 1.04 2375 reflections 147 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.77 e Å−3 Δρmin = −1.25 e Å−3 Data collection: COLLECT (Nonius, 2002 ▶); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048628/bx2383sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048628/bx2383Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CoBr2(C5H4N2O2)(H2O)]·H2OF(000) = 724
Mr = 378.88Dx = 2.42 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3286 reflections
a = 6.9367 (3) Åθ = 2.6–27.5°
b = 13.9983 (3) ŵ = 9.32 mm1
c = 11.1446 (5) ÅT = 150 K
β = 106.043 (2)°Prism, pink
V = 1040.02 (7) Å30.18 × 0.16 × 0.06 mm
Z = 4
Bruker–Nonius KappaCCD diffractometer2375 independent reflections
Radiation source: fine-focus sealed tube2013 reflections with I > 2σ(I)
graphiteRint = 0.055
φ scans and ω scans with κ offsetsθmax = 27.5°, θmin = 2.9°
Absorption correction: multi-scan (SORTAV; Blessing, 1995)h = −8→8
Tmin = 0.399, Tmax = 0.962k = −17→18
7275 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.051P)2] where P = (Fo2 + 2Fc2)/3
2375 reflections(Δ/σ)max < 0.001
147 parametersΔρmax = 0.77 e Å3
1 restraintΔρmin = −1.25 e Å3
Experimental. multi-scan from symmetry-related measurements Sortav (Blessing 1995)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.43042 (7)0.60139 (3)0.71677 (4)0.01247 (14)
Br10.21778 (6)0.59962 (2)0.49002 (3)0.01792 (13)
Br20.14725 (6)0.61738 (3)0.82087 (3)0.02000 (13)
O10.6859 (4)0.5836 (2)0.6571 (3)0.0203 (6)
O20.6433 (4)0.62621 (18)0.8992 (2)0.0154 (5)
O30.8202 (4)0.7413 (2)1.0224 (2)0.0212 (6)
N10.4772 (4)0.7525 (2)0.7222 (3)0.0138 (6)
N20.4431 (4)0.4469 (2)0.7415 (3)0.0141 (6)
C10.6070 (5)0.7858 (2)0.8275 (3)0.0135 (7)
C20.3514 (5)0.3823 (3)0.6545 (3)0.0140 (7)
H20.25740.40340.57990.017*
C30.5688 (6)0.4125 (3)0.8461 (3)0.0169 (8)
H30.63360.45580.91010.020*
C40.3927 (6)0.8159 (3)0.6360 (3)0.0161 (7)
H40.30320.79460.55990.019*
C50.6938 (5)0.7099 (3)0.9208 (3)0.0136 (7)
H1A0.701 (7)0.527 (4)0.619 (5)0.040 (14)*
H1B0.802 (5)0.597 (4)0.700 (6)0.07 (2)*
H3W0.854 (7)0.695 (4)1.066 (5)0.035 (14)*
O1W0.9753 (5)0.6131 (3)1.1815 (3)0.0282 (7)
H1W1.020 (9)0.625 (4)1.249 (6)0.038 (17)*
H2W0.952 (7)0.560 (4)1.184 (5)0.035 (15)*
U11U22U33U12U13U23
Co10.0156 (3)0.0113 (3)0.0094 (3)0.00003 (17)0.0017 (2)−0.00028 (17)
Br10.0230 (2)0.0170 (2)0.0106 (2)0.00181 (13)−0.00064 (16)−0.00216 (12)
Br20.0186 (2)0.0276 (2)0.0140 (2)−0.00205 (14)0.00479 (16)−0.00451 (14)
O10.0186 (16)0.0208 (15)0.0217 (16)−0.0007 (11)0.0061 (13)−0.0048 (11)
O20.0205 (14)0.0127 (13)0.0113 (13)−0.0008 (10)0.0013 (11)−0.0011 (9)
O30.0286 (16)0.0173 (15)0.0122 (13)−0.0009 (11)−0.0035 (12)0.0001 (11)
N10.0162 (16)0.0138 (15)0.0127 (14)−0.0007 (12)0.0061 (13)−0.0010 (12)
N20.0212 (17)0.0133 (15)0.0093 (14)−0.0011 (12)0.0064 (13)0.0001 (11)
C10.0177 (19)0.0142 (18)0.0092 (17)0.0019 (14)0.0045 (15)−0.0010 (13)
C20.016 (2)0.0163 (18)0.0100 (17)−0.0005 (13)0.0039 (15)0.0013 (13)
C30.021 (2)0.0177 (19)0.0112 (18)−0.0041 (15)0.0034 (16)−0.0028 (14)
C40.021 (2)0.0163 (19)0.0093 (16)−0.0004 (14)0.0014 (15)−0.0018 (14)
C50.0141 (19)0.019 (2)0.0086 (16)0.0027 (14)0.0042 (14)−0.0010 (13)
O1W0.037 (2)0.0257 (19)0.0166 (17)−0.0032 (14)−0.0020 (15)0.0060 (13)
Co1—O12.073 (3)N1—C11.349 (4)
Co1—N12.139 (3)N2—C31.337 (5)
Co1—N22.179 (3)N2—C21.350 (5)
Co1—O22.185 (2)C1—C2i1.384 (5)
Co1—Br12.5499 (6)C1—C51.493 (5)
Co1—Br22.5522 (6)C2—H20.9500
O1—H1A0.92 (5)C3—C4ii1.382 (5)
O1—H1B0.84 (2)C3—H30.9500
O2—C51.227 (4)C4—H40.9500
O3—C51.302 (4)O1W—H1W0.75 (6)
O3—H3W0.80 (5)O1W—H2W0.77 (6)
N1—C41.320 (5)
O1—Co1—N189.51 (11)C4—N1—Co1127.6 (2)
O1—Co1—N285.02 (11)C1—N1—Co1115.2 (2)
N1—Co1—N2167.90 (12)C3—N2—C2116.7 (3)
O1—Co1—O284.25 (10)C3—N2—Co1117.5 (2)
N1—Co1—O276.01 (10)C2—N2—Co1125.4 (2)
N2—Co1—O292.67 (10)N1—C1—C2i121.7 (3)
O1—Co1—Br189.57 (8)N1—C1—C5113.8 (3)
N1—Co1—Br194.55 (8)C2i—C1—C5124.5 (3)
N2—Co1—Br196.20 (8)N2—C2—C1ii120.7 (3)
O2—Co1—Br1168.71 (7)N2—C2—H2119.6
O1—Co1—Br2171.91 (8)C1ii—C2—H2119.6
N1—Co1—Br291.74 (8)N2—C3—C4ii122.2 (3)
N2—Co1—Br292.21 (8)N2—C3—H3118.9
O2—Co1—Br288.30 (7)C4ii—C3—H3118.9
Br1—Co1—Br298.29 (2)N1—C4—C3i121.5 (3)
Co1—O1—H1A118 (3)N1—C4—H4119.2
Co1—O1—H1B125 (5)C3i—C4—H4119.2
H1A—O1—H1B104 (5)O2—C5—O3125.4 (3)
C5—O2—Co1114.6 (2)O2—C5—C1120.3 (3)
C5—O3—H3W106 (4)O3—C5—C1114.2 (3)
C4—N1—C1117.1 (3)H1W—O1W—H2W102 (5)
D—H···AD—HH···AD···AD—H···A
O1—H1A···Br1iii0.91 (5)2.31 (5)3.212 (3)169 (4)
O1—H1B···Br2iv0.87 (5)2.39 (5)3.251 (3)173 (5)
O1W—H1W···Br1v0.75 (6)2.68 (6)3.390 (3)159 (6)
O1W—H2W···Br2vi0.76 (6)2.57 (6)3.335 (4)176 (7)
O3—H3W···O1W0.81 (5)1.76 (5)2.543 (5)166 (6)
Table 1

Selected geometric parameters (Å, °)

Co1—O12.073 (3)
Co1—N12.139 (3)
Co1—N22.179 (3)
Co1—O22.185 (2)
Co1—Br12.5499 (6)
Co1—Br22.5522 (6)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯Br1i0.91 (5)2.31 (5)3.212 (3)169 (4)
O1—H1B⋯Br2ii0.87 (5)2.39 (5)3.251 (3)173 (5)
O1W—H1W⋯Br1iii0.75 (6)2.68 (6)3.390 (3)159 (6)
O1W—H2W⋯Br2iv0.76 (6)2.57 (6)3.335 (4)176 (7)
O3—H3W⋯O1W0.81 (5)1.76 (5)2.543 (5)166 (6)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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