Literature DB >> 22199581

Tris(1,10-phenanthroline-κN,N')nickel(II) dinitrate tetra-hydrate.

Masoumeh Tabatabaee, Nikoo Zaji, Masood Parvez.   

Abstract

In the title complex, [Ni(C(12)H(8)N(2))(3)](NO(3))(2)·4H(2)O, the Ni(II) ion is octa-hedrally coordinated by three bidentate 1,10-phenanthroline ligands, each forming a five-membered chelate ring. In the crystal, O-H⋯O and C-H⋯O hydrogen bonds are present between the complex cations, nitrate anions and water mol-ecules. O-H⋯O hydrogen bonds between the uncoord-inated water mol-ecules lead to the formation of a four-membered ring water cluster, with a planar configuration. There were an additional five grossly disordered water mol-ecules in the asymmetric unit, which were removed by the subroutine SQUEEZE; these were were excluded in the calculation of the molecular weight, etc. π-π stacking inter-actions between the aromatic rings are also observed [centroid-centroid distances = 3.697 (2), 3.728 (2) and 3.761 (2) Å].

Entities:  

Year:  2011        PMID: 22199581      PMCID: PMC3238704          DOI: 10.1107/S160053681104880X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on Ni–phenanthroline complexes and related structures, see: Qiua et al. (2011 ▶). For water clusters, see: Rodríguez-Cuamatzi et al. (2004 ▶); Sharif et al. (2010 ▶). For FTIR spectra of phenanthroline complexes, see: Schilt & Taylor (1959 ▶). For the synthesis of 4-amino-5-methyl-2H-1,2,4-triazole-3(4H)-thione, see: Beyer & Kröger (1960 ▶).

Experimental

Crystal data

[Ni(C12H8N2)3](NO3)2·4H2O M = 795.41 Triclinic, a = 13.0463 (6) Å b = 13.1785 (5) Å c = 13.4093 (4) Å α = 82.688 (2)° β = 72.147 (2)° γ = 67.402 (2)° V = 2025.85 (14) Å3 Z = 2 Mo Kα radiation μ = 0.54 mm−1 T = 173 K 0.14 × 0.12 × 0.10 mm

Data collection

Nonius KappaCCD diffractometer with APEXII CCD Absorption correction: multi-scan (SORTAV; Blessing, 1997 ▶) T min = 0.928, T max = 0.948 13391 measured reflections 7100 independent reflections 5845 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.160 S = 1.08 7100 reflections 496 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.39 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶); data reduction: SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681104880X/hy2480sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104880X/hy2480Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C12H8N2)3](NO3)2·4H2OZ = 2
Mr = 795.41F(000) = 824
Triclinic, P1Dx = 1.304 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 13.0463 (6) ÅCell parameters from 8521 reflections
b = 13.1785 (5) Åθ = 1.0–27.5°
c = 13.4093 (4) ŵ = 0.54 mm1
α = 82.688 (2)°T = 173 K
β = 72.147 (2)°Prism, pink
γ = 67.402 (2)°0.14 × 0.12 × 0.10 mm
V = 2025.85 (14) Å3
Nonius KappaCCD diffractometer with APEXII CCD7100 independent reflections
Radiation source: fine-focus sealed tube5845 reflections with I > 2σ(I)
graphiteRint = 0.037
ω and φ scansθmax = 25.0°, θmin = 2.8°
Absorption correction: multi-scan (SORTAV; Blessing, 1997)h = −15→15
Tmin = 0.928, Tmax = 0.948k = −15→15
13391 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.160H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0795P)2 + 1.9793P] where P = (Fo2 + 2Fc2)/3
7100 reflections(Δ/σ)max = 0.001
496 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.39 e Å3
Experimental. IR Spectra IR spectra were recorded using FTIR Spectra Bruker Tensor 27 spectrometer (KBr pellets, 4000–400 cm-1). TGA-DTA measurements were performed at heating rate of 10 K min-1 in the temperature range of 298–1273 K, under nitrogen flow of 20 ml min-1 on instrument Perkin Elmer Pyris Diamond Thermogravimetric/Differential Thermal Analyzer. Elemental analyses were performed using a Costech ECS 4010 CHNS analyzer.The FTIR spectrum of the crystals shows broad strong bands at the region 3000–3500 cm-1. In the spectra of the phenanthroline complexes strong bands are observed in three frequency regions, between 700 - 900 cm-1, 1125 - 1250 cm-1, and 1400 - 1650 cm-1 (Schilt & Taylor 1959). In the title complex, these bonds were observed in the regions 721–869 cm -1, 1138- 1225 cm -1 and 1429–1573 in the IR spectra.Thermal Analyses The thermogravimetric analysis curve for compound shows that the weight loss from at 635 K corresponds to the loss of H2O (experimental value 18.76% and calculated value 18.29%). The further decomposition began at 801 K and finished at 803 K indicating the complete removal of organic part of the compound (experimental value 93.34% and calculated value 91.5%).
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.63475 (4)0.15916 (3)0.69156 (3)0.02848 (15)
N10.4993 (3)0.2563 (2)0.8096 (2)0.0325 (6)
N20.5688 (2)0.0406 (2)0.77467 (19)0.0290 (6)
N30.7612 (2)0.1153 (2)0.77055 (19)0.0311 (6)
N40.7707 (2)0.0408 (2)0.5899 (2)0.0324 (6)
N50.6785 (2)0.2890 (2)0.6102 (2)0.0301 (6)
N60.5324 (2)0.2015 (2)0.5887 (2)0.0312 (6)
C10.4656 (4)0.3632 (3)0.8248 (3)0.0434 (9)
H10.51120.40220.78160.052*
C20.3655 (4)0.4211 (3)0.9020 (3)0.0510 (10)
H20.34320.49800.90930.061*
C30.3003 (4)0.3658 (3)0.9667 (3)0.0458 (9)
H30.23270.40391.01980.055*
C40.3341 (3)0.2526 (3)0.9540 (2)0.0356 (8)
C50.2720 (3)0.1873 (3)1.0187 (3)0.0408 (9)
H50.20430.22091.07360.049*
C60.3093 (3)0.0789 (3)1.0020 (3)0.0408 (8)
H60.26700.03741.04610.049*
C70.4095 (3)0.0241 (3)0.9210 (2)0.0338 (7)
C80.4522 (3)−0.0897 (3)0.8999 (3)0.0380 (8)
H80.4134−0.13510.94170.046*
C90.5486 (3)−0.1334 (3)0.8200 (3)0.0385 (8)
H90.5778−0.20970.80610.046*
C100.6051 (3)−0.0662 (3)0.7581 (3)0.0349 (8)
H100.6720−0.09830.70190.042*
C110.4337 (3)0.2018 (3)0.8734 (2)0.0305 (7)
C120.4717 (3)0.0857 (3)0.8554 (2)0.0298 (7)
C130.7583 (3)0.1566 (3)0.8574 (2)0.0359 (8)
H130.69270.21870.88810.043*
C140.8470 (4)0.1129 (3)0.9051 (3)0.0439 (9)
H140.84240.14590.96610.053*
C150.9405 (4)0.0228 (3)0.8640 (3)0.0449 (9)
H151.0004−0.00890.89740.054*
C160.9484 (3)−0.0236 (3)0.7721 (3)0.0376 (8)
C171.0444 (4)−0.1179 (3)0.7218 (3)0.0504 (10)
H171.1066−0.15320.75210.060*
C181.0475 (3)−0.1572 (3)0.6320 (3)0.0475 (9)
H181.1113−0.22030.60080.057*
C190.9565 (3)−0.1053 (3)0.5835 (3)0.0393 (8)
C200.9564 (3)−0.1402 (3)0.4882 (3)0.0440 (9)
H201.0187−0.20220.45320.053*
C210.8667 (3)−0.0848 (3)0.4469 (3)0.0423 (9)
H210.8663−0.10750.38260.051*
C220.7751 (3)0.0058 (3)0.4994 (2)0.0368 (8)
H220.71340.04410.46910.044*
C230.8561 (3)0.0273 (3)0.7274 (2)0.0322 (7)
C240.8607 (3)−0.0132 (3)0.6311 (2)0.0326 (7)
C250.7471 (3)0.3352 (3)0.6247 (3)0.0359 (8)
H250.77800.31170.68290.043*
C260.7760 (3)0.4173 (3)0.5578 (3)0.0399 (8)
H260.82390.44960.57170.048*
C270.7346 (3)0.4498 (3)0.4731 (3)0.0396 (8)
H270.75580.50300.42570.047*
C280.6603 (3)0.4045 (3)0.4557 (2)0.0335 (8)
C290.6100 (3)0.4353 (3)0.3700 (3)0.0407 (9)
H290.62970.48700.31940.049*
C300.5352 (3)0.3921 (3)0.3601 (3)0.0412 (9)
H300.50290.41420.30260.049*
C310.5035 (3)0.3138 (3)0.4343 (2)0.0340 (7)
C320.4228 (3)0.2689 (3)0.4297 (3)0.0422 (9)
H320.38500.29130.37600.051*
C330.3996 (3)0.1932 (3)0.5033 (3)0.0431 (9)
H330.34500.16280.50150.052*
C340.4568 (3)0.1606 (3)0.5812 (3)0.0376 (8)
H340.44080.10670.63100.045*
C350.6342 (3)0.3242 (3)0.5274 (2)0.0278 (7)
C360.5545 (3)0.2786 (2)0.5166 (2)0.0286 (7)
N70.7221 (3)0.0523 (3)0.2402 (3)0.0523 (9)
O10.6907 (3)−0.0150 (3)0.2998 (2)0.0791 (11)
O20.7909 (2)0.0240 (2)0.1500 (2)0.0519 (7)
O30.6849 (3)0.1498 (3)0.2673 (3)0.0939 (13)
N80.1200 (4)0.3433 (4)0.3285 (4)0.0794 (12)
O40.1898 (4)0.3125 (5)0.3753 (4)0.1248 (19)
O50.1483 (6)0.3317 (8)0.2355 (4)0.198 (4)
O60.0122 (4)0.3875 (4)0.3707 (5)0.133 (2)
O70.0438 (3)0.7131 (3)0.2656 (2)0.0672 (9)
H710.09630.66730.22330.081*
H720.00040.68140.29980.081*
O80.1078 (3)0.2081 (3)0.8549 (3)0.0772 (10)
H810.05960.22800.82250.093*
H820.12710.14190.86500.093*
O90.0897 (3)0.3860 (3)0.5860 (3)0.0781 (10)
H910.09990.37940.52300.094*
H920.05590.45190.59870.094*
O100.2177 (3)0.3503 (3)0.7381 (3)0.0862 (11)
H1010.19430.30280.77090.103*
H1020.17000.38900.70710.103*
U11U22U33U12U13U23
Ni10.0334 (3)0.0289 (2)0.0266 (2)−0.01518 (19)−0.01072 (17)0.00554 (16)
N10.0399 (17)0.0291 (15)0.0298 (14)−0.0134 (13)−0.0128 (12)0.0056 (11)
N20.0303 (15)0.0294 (14)0.0287 (13)−0.0124 (12)−0.0104 (11)0.0049 (11)
N30.0377 (16)0.0354 (15)0.0265 (13)−0.0198 (13)−0.0124 (12)0.0075 (11)
N40.0354 (16)0.0366 (15)0.0306 (14)−0.0199 (13)−0.0095 (12)0.0034 (11)
N50.0309 (15)0.0307 (14)0.0304 (13)−0.0147 (12)−0.0079 (11)0.0031 (11)
N60.0328 (16)0.0334 (15)0.0299 (13)−0.0153 (13)−0.0103 (12)0.0051 (11)
C10.053 (2)0.0336 (19)0.0410 (19)−0.0179 (18)−0.0103 (17)0.0055 (15)
C20.064 (3)0.036 (2)0.046 (2)−0.011 (2)−0.015 (2)−0.0028 (17)
C30.048 (2)0.043 (2)0.040 (2)−0.0115 (19)−0.0085 (17)−0.0057 (16)
C40.0347 (19)0.041 (2)0.0307 (16)−0.0105 (16)−0.0139 (14)0.0007 (14)
C50.032 (2)0.055 (2)0.0324 (17)−0.0166 (18)−0.0060 (15)0.0022 (16)
C60.039 (2)0.051 (2)0.0377 (18)−0.0256 (18)−0.0092 (16)0.0062 (16)
C70.0348 (19)0.0380 (19)0.0340 (17)−0.0180 (16)−0.0153 (15)0.0094 (14)
C80.045 (2)0.043 (2)0.0382 (18)−0.0282 (18)−0.0181 (16)0.0126 (15)
C90.051 (2)0.0301 (18)0.0426 (19)−0.0200 (17)−0.0195 (17)0.0057 (15)
C100.038 (2)0.0327 (18)0.0378 (18)−0.0156 (16)−0.0137 (15)0.0039 (14)
C110.0327 (18)0.0319 (17)0.0289 (16)−0.0118 (15)−0.0144 (14)0.0070 (13)
C120.0307 (18)0.0363 (18)0.0284 (15)−0.0167 (15)−0.0136 (13)0.0069 (13)
C130.046 (2)0.044 (2)0.0267 (16)−0.0265 (17)−0.0114 (15)0.0066 (14)
C140.053 (2)0.062 (3)0.0330 (18)−0.035 (2)−0.0191 (17)0.0083 (17)
C150.045 (2)0.065 (3)0.041 (2)−0.034 (2)−0.0245 (17)0.0165 (18)
C160.036 (2)0.042 (2)0.0420 (19)−0.0214 (17)−0.0164 (15)0.0137 (15)
C170.038 (2)0.056 (2)0.062 (3)−0.020 (2)−0.0227 (19)0.015 (2)
C180.033 (2)0.040 (2)0.065 (3)−0.0083 (17)−0.0145 (18)0.0019 (18)
C190.0330 (19)0.0363 (19)0.048 (2)−0.0170 (16)−0.0064 (16)0.0028 (15)
C200.038 (2)0.035 (2)0.055 (2)−0.0116 (17)−0.0053 (17)−0.0088 (17)
C210.049 (2)0.043 (2)0.0358 (18)−0.0214 (19)−0.0062 (17)−0.0043 (16)
C220.044 (2)0.042 (2)0.0277 (16)−0.0199 (17)−0.0104 (15)0.0029 (14)
C230.0328 (18)0.0389 (19)0.0326 (16)−0.0232 (16)−0.0106 (14)0.0092 (14)
C240.0357 (19)0.0366 (18)0.0307 (16)−0.0211 (16)−0.0097 (14)0.0079 (14)
C250.0359 (19)0.0400 (19)0.0383 (18)−0.0209 (16)−0.0126 (15)0.0055 (15)
C260.039 (2)0.038 (2)0.045 (2)−0.0216 (17)−0.0085 (16)0.0032 (16)
C270.040 (2)0.0344 (19)0.0402 (19)−0.0176 (17)−0.0038 (16)0.0064 (15)
C280.0317 (18)0.0293 (17)0.0284 (16)−0.0070 (14)0.0010 (13)0.0008 (13)
C290.049 (2)0.0376 (19)0.0295 (17)−0.0140 (17)−0.0084 (15)0.0091 (14)
C300.049 (2)0.038 (2)0.0274 (17)−0.0034 (17)−0.0139 (15)0.0023 (14)
C310.0328 (19)0.0327 (18)0.0306 (16)−0.0026 (15)−0.0116 (14)−0.0027 (13)
C320.041 (2)0.044 (2)0.0418 (19)−0.0068 (17)−0.0212 (17)−0.0035 (16)
C330.041 (2)0.046 (2)0.053 (2)−0.0189 (18)−0.0206 (17)−0.0048 (17)
C340.036 (2)0.040 (2)0.0420 (19)−0.0177 (16)−0.0136 (15)0.0016 (15)
C350.0294 (17)0.0278 (16)0.0227 (14)−0.0092 (14)−0.0058 (13)0.0042 (12)
C360.0323 (18)0.0266 (16)0.0239 (15)−0.0087 (14)−0.0061 (13)−0.0012 (12)
N70.043 (2)0.075 (3)0.051 (2)−0.0298 (19)−0.0183 (16)−0.0039 (18)
O10.083 (3)0.123 (3)0.0530 (18)−0.064 (2)−0.0270 (17)0.0274 (19)
O20.0473 (17)0.0572 (17)0.0486 (16)−0.0220 (14)−0.0046 (13)−0.0042 (13)
O30.069 (2)0.088 (3)0.121 (3)−0.028 (2)0.000 (2)−0.057 (2)
N80.066 (3)0.092 (3)0.078 (3)−0.029 (3)−0.013 (3)−0.013 (3)
O40.056 (3)0.201 (6)0.117 (4)−0.030 (3)−0.038 (3)−0.021 (3)
O50.134 (5)0.359 (11)0.085 (4)−0.056 (6)−0.018 (3)−0.084 (5)
O60.067 (3)0.093 (3)0.182 (5)−0.010 (2)0.017 (3)−0.001 (3)
O70.0550 (19)0.098 (3)0.0602 (18)−0.0392 (19)−0.0137 (15)−0.0114 (17)
O80.095 (3)0.058 (2)0.091 (2)−0.0182 (19)−0.057 (2)0.0015 (17)
O90.089 (3)0.063 (2)0.079 (2)−0.032 (2)−0.0155 (19)0.0027 (17)
O100.078 (3)0.093 (3)0.095 (3)−0.039 (2)−0.022 (2)−0.006 (2)
Ni1—N12.080 (3)C17—C181.353 (6)
Ni1—N52.083 (3)C17—H170.9500
Ni1—N62.087 (3)C18—C191.428 (5)
Ni1—N32.088 (3)C18—H180.9500
Ni1—N42.090 (3)C19—C241.408 (5)
Ni1—N22.103 (2)C19—C201.412 (5)
N1—C11.328 (4)C20—C211.360 (6)
N1—C111.358 (4)C20—H200.9500
N2—C101.326 (4)C21—C221.396 (5)
N2—C121.369 (4)C21—H210.9500
N3—C131.332 (4)C22—H220.9500
N3—C231.356 (4)C23—C241.435 (5)
N4—C221.330 (4)C25—C261.407 (5)
N4—C241.359 (4)C25—H250.9500
N5—C251.329 (4)C26—C271.356 (5)
N5—C351.356 (4)C26—H260.9500
N6—C341.325 (4)C27—C281.402 (5)
N6—C361.361 (4)C27—H270.9500
C1—C21.402 (6)C28—C351.407 (4)
C1—H10.9500C28—C291.434 (5)
C2—C31.367 (6)C29—C301.350 (5)
C2—H20.9500C29—H290.9500
C3—C41.402 (5)C30—C311.429 (5)
C3—H30.9500C30—H300.9500
C4—C111.400 (5)C31—C361.399 (4)
C4—C51.436 (5)C31—C321.410 (5)
C5—C61.346 (5)C32—C331.363 (5)
C5—H50.9500C32—H320.9500
C6—C71.420 (5)C33—C341.397 (5)
C6—H60.9500C33—H330.9500
C7—C121.407 (4)C34—H340.9500
C7—C81.417 (5)C35—C361.434 (5)
C8—C91.354 (5)N7—O11.221 (5)
C8—H80.9500N7—O31.245 (5)
C9—C101.399 (5)N7—O21.265 (4)
C9—H90.9500N8—O41.179 (6)
C10—H100.9500N8—O51.199 (6)
C11—C121.443 (5)N8—O61.266 (6)
C13—C141.388 (5)O7—H710.8200
C13—H130.9500O7—H720.8200
C14—C151.358 (6)O8—H810.8200
C14—H140.9500O8—H820.8200
C15—C161.403 (5)O9—H910.8248
C15—H150.9500O9—H920.8200
C16—C231.407 (5)O10—H1010.8200
C16—C171.437 (6)O10—H1020.8200
N1—Ni1—N595.20 (10)C14—C15—H15120.1
N1—Ni1—N692.06 (11)C16—C15—H15120.1
N5—Ni1—N679.80 (10)C15—C16—C23116.8 (4)
N1—Ni1—N396.51 (11)C15—C16—C17124.0 (3)
N5—Ni1—N393.96 (10)C23—C16—C17119.2 (3)
N6—Ni1—N3169.85 (10)C18—C17—C16121.0 (4)
N1—Ni1—N4170.85 (10)C18—C17—H17119.5
N5—Ni1—N493.40 (10)C16—C17—H17119.5
N6—Ni1—N492.55 (11)C17—C18—C19121.0 (4)
N3—Ni1—N479.75 (11)C17—C18—H18119.5
N1—Ni1—N279.88 (10)C19—C18—H18119.5
N5—Ni1—N2172.77 (11)C24—C19—C20116.8 (3)
N6—Ni1—N295.00 (10)C24—C19—C18119.5 (3)
N3—Ni1—N291.88 (10)C20—C19—C18123.7 (4)
N4—Ni1—N291.84 (10)C21—C20—C19119.7 (3)
C1—N1—C11117.6 (3)C21—C20—H20120.1
C1—N1—Ni1128.6 (2)C19—C20—H20120.1
C11—N1—Ni1113.6 (2)C20—C21—C22119.7 (3)
C10—N2—C12117.9 (3)C20—C21—H21120.2
C10—N2—Ni1129.9 (2)C22—C21—H21120.2
C12—N2—Ni1112.1 (2)N4—C22—C21122.7 (3)
C13—N3—C23117.7 (3)N4—C22—H22118.6
C13—N3—Ni1129.7 (3)C21—C22—H22118.6
C23—N3—Ni1112.5 (2)N3—C23—C16123.1 (3)
C22—N4—C24118.0 (3)N3—C23—C24117.2 (3)
C22—N4—Ni1129.4 (3)C16—C23—C24119.7 (3)
C24—N4—Ni1112.2 (2)N4—C24—C19123.0 (3)
C25—N5—C35117.9 (3)N4—C24—C23117.3 (3)
C25—N5—Ni1129.3 (2)C19—C24—C23119.7 (3)
C35—N5—Ni1112.7 (2)N5—C25—C26122.9 (3)
C34—N6—C36117.8 (3)N5—C25—H25118.6
C34—N6—Ni1129.7 (2)C26—C25—H25118.6
C36—N6—Ni1112.4 (2)C27—C26—C25119.1 (3)
N1—C1—C2122.8 (3)C27—C26—H26120.5
N1—C1—H1118.6C25—C26—H26120.5
C2—C1—H1118.6C26—C27—C28119.9 (3)
C3—C2—C1119.4 (4)C26—C27—H27120.1
C3—C2—H2120.3C28—C27—H27120.1
C1—C2—H2120.3C27—C28—C35117.4 (3)
C2—C3—C4119.4 (4)C27—C28—C29124.0 (3)
C2—C3—H3120.3C35—C28—C29118.6 (3)
C4—C3—H3120.3C30—C29—C28121.2 (3)
C11—C4—C3117.4 (3)C30—C29—H29119.4
C11—C4—C5119.1 (3)C28—C29—H29119.4
C3—C4—C5123.5 (3)C29—C30—C31121.2 (3)
C6—C5—C4120.4 (3)C29—C30—H30119.4
C6—C5—H5119.8C31—C30—H30119.4
C4—C5—H5119.8C36—C31—C32117.3 (3)
C5—C6—C7122.4 (3)C36—C31—C30119.1 (3)
C5—C6—H6118.8C32—C31—C30123.6 (3)
C7—C6—H6118.8C33—C32—C31119.3 (3)
C12—C7—C8116.6 (3)C33—C32—H32120.3
C12—C7—C6118.7 (3)C31—C32—H32120.3
C8—C7—C6124.7 (3)C32—C33—C34119.6 (3)
C9—C8—C7119.8 (3)C32—C33—H33120.2
C9—C8—H8120.1C34—C33—H33120.2
C7—C8—H8120.1N6—C34—C33122.9 (3)
C8—C9—C10120.0 (3)N6—C34—H34118.5
C8—C9—H9120.0C33—C34—H34118.5
C10—C9—H9120.0N5—C35—C28122.8 (3)
N2—C10—C9122.5 (3)N5—C35—C36117.2 (3)
N2—C10—H10118.7C28—C35—C36120.0 (3)
C9—C10—H10118.7N6—C36—C31123.0 (3)
N1—C11—C4123.3 (3)N6—C36—C35117.2 (3)
N1—C11—C12116.8 (3)C31—C36—C35119.8 (3)
C4—C11—C12119.9 (3)O1—N7—O3120.1 (4)
N2—C12—C7123.1 (3)O1—N7—O2120.3 (4)
N2—C12—C11117.4 (3)O3—N7—O2119.6 (4)
C7—C12—C11119.5 (3)O4—N8—O5120.6 (6)
N3—C13—C14122.8 (4)O4—N8—O6124.0 (6)
N3—C13—H13118.6O5—N8—O6115.3 (6)
C14—C13—H13118.6H71—O7—H72105.6
C15—C14—C13119.7 (3)H81—O8—H82109.1
C15—C14—H14120.2H91—O9—H92106.6
C13—C14—H14120.2H101—O10—H102107.6
C14—C15—C16119.9 (3)
N5—Ni1—N1—C1−4.6 (3)C6—C7—C12—N2−179.5 (3)
N6—Ni1—N1—C1−84.5 (3)C8—C7—C12—C11−179.2 (3)
N3—Ni1—N1—C190.0 (3)C6—C7—C12—C111.3 (5)
N2—Ni1—N1—C1−179.2 (3)N1—C11—C12—N2−1.3 (4)
N5—Ni1—N1—C11170.3 (2)C4—C11—C12—N2179.2 (3)
N6—Ni1—N1—C1190.3 (2)N1—C11—C12—C7178.0 (3)
N3—Ni1—N1—C11−95.2 (2)C4—C11—C12—C7−1.5 (5)
N2—Ni1—N1—C11−4.4 (2)C23—N3—C13—C14−0.6 (5)
N1—Ni1—N2—C10−178.5 (3)Ni1—N3—C13—C14175.1 (2)
N6—Ni1—N2—C1090.3 (3)N3—C13—C14—C15−1.5 (5)
N3—Ni1—N2—C10−82.2 (3)C13—C14—C15—C161.9 (5)
N4—Ni1—N2—C10−2.4 (3)C14—C15—C16—C23−0.3 (5)
N1—Ni1—N2—C123.7 (2)C14—C15—C16—C17179.1 (3)
N6—Ni1—N2—C12−87.5 (2)C15—C16—C17—C18−178.7 (4)
N3—Ni1—N2—C1299.9 (2)C23—C16—C17—C180.7 (5)
N4—Ni1—N2—C12179.7 (2)C16—C17—C18—C191.0 (6)
N1—Ni1—N3—C13−12.4 (3)C17—C18—C19—C24−1.5 (5)
N5—Ni1—N3—C1383.3 (3)C17—C18—C19—C20178.0 (4)
N6—Ni1—N3—C13134.9 (5)C24—C19—C20—C210.4 (5)
N4—Ni1—N3—C13176.0 (3)C18—C19—C20—C21−179.0 (3)
N2—Ni1—N3—C13−92.5 (3)C19—C20—C21—C22−0.4 (5)
N1—Ni1—N3—C23163.4 (2)C24—N4—C22—C211.4 (5)
N5—Ni1—N3—C23−100.9 (2)Ni1—N4—C22—C21−171.0 (2)
N6—Ni1—N3—C23−49.3 (7)C20—C21—C22—N4−0.6 (5)
N4—Ni1—N3—C23−8.1 (2)C13—N3—C23—C162.2 (4)
N2—Ni1—N3—C2383.4 (2)Ni1—N3—C23—C16−174.2 (2)
N5—Ni1—N4—C22−85.2 (3)C13—N3—C23—C24−177.1 (3)
N6—Ni1—N4—C22−5.2 (3)Ni1—N3—C23—C246.5 (3)
N3—Ni1—N4—C22−178.6 (3)C15—C16—C23—N3−1.8 (5)
N2—Ni1—N4—C2289.8 (3)C17—C16—C23—N3178.8 (3)
N5—Ni1—N4—C24102.1 (2)C15—C16—C23—C24177.6 (3)
N6—Ni1—N4—C24−178.0 (2)C17—C16—C23—C24−1.9 (5)
N3—Ni1—N4—C248.7 (2)C22—N4—C24—C19−1.4 (4)
N2—Ni1—N4—C24−82.9 (2)Ni1—N4—C24—C19172.3 (2)
N1—Ni1—N5—C2585.3 (3)C22—N4—C24—C23178.3 (3)
N6—Ni1—N5—C25176.5 (3)Ni1—N4—C24—C23−8.0 (3)
N3—Ni1—N5—C25−11.6 (3)C20—C19—C24—N40.5 (5)
N4—Ni1—N5—C25−91.6 (3)C18—C19—C24—N4180.0 (3)
N1—Ni1—N5—C35−99.1 (2)C20—C19—C24—C23−179.2 (3)
N6—Ni1—N5—C35−7.9 (2)C18—C19—C24—C230.3 (5)
N3—Ni1—N5—C35164.0 (2)N3—C23—C24—N41.1 (4)
N4—Ni1—N5—C3584.1 (2)C16—C23—C24—N4−178.3 (3)
N1—Ni1—N6—C34−82.2 (3)N3—C23—C24—C19−179.2 (3)
N5—Ni1—N6—C34−177.1 (3)C16—C23—C24—C191.4 (4)
N3—Ni1—N6—C34130.3 (6)C35—N5—C25—C26−0.7 (5)
N4—Ni1—N6—C3489.9 (3)Ni1—N5—C25—C26174.8 (3)
N2—Ni1—N6—C34−2.2 (3)N5—C25—C26—C27−1.5 (6)
N1—Ni1—N6—C36101.9 (2)C25—C26—C27—C282.5 (5)
N5—Ni1—N6—C367.0 (2)C26—C27—C28—C35−1.4 (5)
N3—Ni1—N6—C36−45.6 (7)C26—C27—C28—C29178.5 (3)
N4—Ni1—N6—C36−86.0 (2)C27—C28—C29—C30−177.1 (3)
N2—Ni1—N6—C36−178.1 (2)C35—C28—C29—C302.8 (5)
C11—N1—C1—C2−1.0 (5)C28—C29—C30—C31−0.2 (6)
Ni1—N1—C1—C2173.7 (3)C29—C30—C31—C36−2.3 (5)
N1—C1—C2—C31.6 (6)C29—C30—C31—C32177.7 (3)
C1—C2—C3—C4−0.6 (6)C36—C31—C32—C33−1.0 (5)
C2—C3—C4—C11−0.9 (5)C30—C31—C32—C33178.9 (3)
C2—C3—C4—C5179.4 (4)C31—C32—C33—C34−0.6 (6)
C11—C4—C5—C60.1 (5)C36—N6—C34—C33−0.1 (5)
C3—C4—C5—C6179.9 (4)Ni1—N6—C34—C33−175.8 (3)
C4—C5—C6—C7−0.3 (6)C32—C33—C34—N61.2 (6)
C5—C6—C7—C12−0.3 (5)C25—N5—C35—C281.8 (5)
C5—C6—C7—C8−179.9 (3)Ni1—N5—C35—C28−174.4 (2)
C12—C7—C8—C90.2 (5)C25—N5—C35—C36−176.1 (3)
C6—C7—C8—C9179.7 (3)Ni1—N5—C35—C367.7 (4)
C7—C8—C9—C10−0.5 (5)C27—C28—C35—N5−0.8 (5)
C12—N2—C10—C9−0.5 (5)C29—C28—C35—N5179.3 (3)
Ni1—N2—C10—C9−178.2 (2)C27—C28—C35—C36177.1 (3)
C8—C9—C10—N20.7 (5)C29—C28—C35—C36−2.8 (5)
C1—N1—C11—C4−0.6 (5)C34—N6—C36—C31−1.6 (5)
Ni1—N1—C11—C4−176.1 (2)Ni1—N6—C36—C31174.8 (2)
C1—N1—C11—C12179.9 (3)C34—N6—C36—C35178.4 (3)
Ni1—N1—C11—C124.4 (4)Ni1—N6—C36—C35−5.2 (4)
C3—C4—C11—N11.6 (5)C32—C31—C36—N62.2 (5)
C5—C4—C11—N1−178.7 (3)C30—C31—C36—N6−177.7 (3)
C3—C4—C11—C12−179.0 (3)C32—C31—C36—C35−177.8 (3)
C5—C4—C11—C120.8 (5)C30—C31—C36—C352.2 (5)
C10—N2—C12—C70.1 (5)N5—C35—C36—N6−1.7 (4)
Ni1—N2—C12—C7178.2 (2)C28—C35—C36—N6−179.7 (3)
C10—N2—C12—C11179.4 (3)N5—C35—C36—C31178.3 (3)
Ni1—N2—C12—C11−2.5 (3)C28—C35—C36—C310.4 (5)
C8—C7—C12—N20.0 (5)
D—H···AD—HH···AD···AD—H···A
O7—H72···O9i0.821.972.768 (5)164
O8—H81···O7i0.821.942.749 (5)172
O8—H82···O2ii0.822.042.827 (4)164
O9—H91···O40.822.072.845 (6)155
O9—H92···O6i0.822.002.817 (6)175
O10—H101···O80.822.012.822 (5)169
O10—H102···O90.822.202.900 (6)143
C5—H5···O5iii0.952.533.293 (7)138
C15—H15···O2iv0.952.533.265 (5)134
C25—H25···O7v0.952.523.300 (5)140
C32—H32···O40.952.463.165 (6)131
C34—H34···O1ii0.952.373.180 (5)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O7—H72⋯O9i0.821.972.768 (5)164
O8—H81⋯O7i0.821.942.749 (5)172
O8—H82⋯O2ii0.822.042.827 (4)164
O9—H91⋯O40.822.072.845 (6)155
O9—H92⋯O6i0.822.002.817 (6)175
O10—H101⋯O80.822.012.822 (5)169
O10—H102⋯O90.822.202.900 (6)143
C5—H5⋯O5iii0.952.533.293 (7)138
C15—H15⋯O2iv0.952.533.265 (5)134
C25—H25⋯O7v0.952.523.300 (5)140
C32—H32⋯O40.952.463.165 (6)131
C34—H34⋯O1ii0.952.373.180 (5)143

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  5 in total

1.  Modification of 2D water that contains hexameric units in chair and boat conformations--a contribution to the structural elucidation of bulk water.

Authors:  Patricia Rodríguez-Cuamatzi; Gabriela Vargas-Díaz; Herbert Höpfl
Journal:  Angew Chem Int Ed Engl       Date:  2004-06-07       Impact factor: 15.336

2.  Synthesis of a new Ni-phenanthroline complex and its application as an electrochemical probe for detection of nucleic acid.

Authors:  Bin Qiu; Longhua Guo; Chunhua Guo; Zhiyong Guo; Zhenyu Lin; Guonan Chen
Journal:  Biosens Bioelectron       Date:  2011-01-15       Impact factor: 10.618

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  2-Amino-4-methyl-pyridinium 6-carb-oxy-pyridine-2-carboxyl-ate sesquihydrate.

Authors:  Mahboubeh A Sharif; Masoumeh Tabatabaee; Mahnaz Adinehloo; Hossein Aghabozorg
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-20

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.