Literature DB >> 22199556

4-[3-(Isonicotino-yloxy)propoxycarbon-yl]pyridinium diiodidoargentate(I).

Javier Vallejos, Iván Brito, Alejandro Cárdenas, Michael Bolte, Matías López-Rodríguez.   

Abstract

The structure of the title compound, (C(15)H(15)N(2)O(4))[AgI(2)], consists of an organic 4-[3-(isonicotino-yloxy)propoxycarbon-yl]n class="Chemical">pyridinium cation which has a gauche-gauche (O/C/C/C-O/C/C/C or GG') conformation and lies on a twofold rotation axis, which passes through the central C atom of the aliphatic chain, and an inorganic [AgI(2)](-) anion. In the complex anion, the Ag(+) cation is bound to two I(-) anions in a linear geometry. The anion was modelled assuming disorder around a crystallographic inversion centre near the location of the Ag(+) cation. The crystal packing is stabilized by a strong inter-molecular N-H⋯N hydrogen bond, which links the cations into zigzag chains with graph-set notation C(16) running along the face diagonal of the ac plane. The N-bound H atom is disordered over two equally occupied symmetry-equivalent sites, so that the mol-ecule has a pyridinium ring at one end and a pyridine ring at the other.

Entities:  

Year:  2011        PMID: 22199556      PMCID: PMC3238665          DOI: 10.1107/S1600536811047295

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Brito et al. (2010 ▶). For conformation definitions, see: Carlucci et al. (2002 ▶). For coordination polymers, see: Brito et al. (2011 ▶); Albanez et al. (2011 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶). For polymeric organic-inorganic materials, see: Blake et al. (1999 ▶). For mol­ecular geometry calculations, see: Macrae et al. (2008 ▶).

Experimental

Crystal data

(C15H15N2O4)[n class="Chemical">AgI2] M = 648.96 Monoclinic, a = 14.8788 (7) Å b = 5.4712 (3) Å c = 24.5008 (11) Å β = 95.347 (4)° V = 1985.81 (17) Å3 Z = 4 Mo Kα radiation μ = 4.14 mm−1 T = 173 K 0.22 × 0.13 × 0.10 mm

Data collection

Stoe IPDS II two-circle diffractometer Absorption correction: multi-scan (MULABS; Spek, 2009 ▶; Blessing, 1995 ▶) T min = 0.463, T max = 0.682 9000 measured reflections 2158 independent reflections 1821 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.119 S = 1.03 2158 reflections 124 parameters H-atom parameters constrained Δρmax = 1.23 e Å−3 Δρmin = −0.76 e Å−3 Data collection: X-AREA (Stoe & Cie, 2001 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811047295/zl2424sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047295/zl2424Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C15H15N2O4)[AgI2]F(000) = 1216
Mr = 648.96Dx = 2.171 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 9489 reflections
a = 14.8788 (7) Åθ = 2.8–27.5°
b = 5.4712 (3) ŵ = 4.14 mm1
c = 24.5008 (11) ÅT = 173 K
β = 95.347 (4)°Plate, red
V = 1985.81 (17) Å30.22 × 0.13 × 0.10 mm
Z = 4
Stoe IPDS II two-circle diffractometer2158 independent reflections
Radiation source: fine-focus sealed tube1821 reflections with I > 2σ(I)
graphiteRint = 0.053
ω scansθmax = 27.1°, θmin = 2.8°
Absorption correction: multi-scan (MULABS; Spek, 2009; Blessing, 1995)h = −18→18
Tmin = 0.463, Tmax = 0.682k = −6→6
9000 measured reflectionsl = −27→31
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0748P)2 + 3.0902P] where P = (Fo2 + 2Fc2)/3
2158 reflections(Δ/σ)max < 0.001
124 parametersΔρmax = 1.23 e Å3
0 restraintsΔρmin = −0.76 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ag10.0035 (2)0.5344 (4)0.50664 (10)0.0480 (4)0.50
I10.0644 (2)0.7876 (5)0.60644 (12)0.0697 (6)0.50
I2−0.0570 (2)0.2745 (6)0.40629 (12)0.0707 (6)0.50
O10.10823 (19)0.3522 (6)0.79400 (11)0.0484 (6)
O20.1809 (2)0.0578 (5)0.75220 (11)0.0488 (7)
C10.1569 (2)0.1523 (7)0.79293 (15)0.0378 (7)
C20.0819 (3)0.4755 (8)0.74215 (17)0.0467 (9)
H2A0.06790.35390.71260.056*
H2B0.13150.58130.73180.056*
C30.00000.6262 (11)0.75000.0485 (12)
H3A−0.01330.73290.71760.058*
C110.1794 (2)0.0487 (7)0.84926 (15)0.0389 (7)
C120.2319 (3)−0.1588 (8)0.85514 (16)0.0466 (8)
H120.2521−0.23690.82390.056*
C130.2549 (4)−0.2519 (8)0.90675 (19)0.0539 (10)
H130.2926−0.39210.91100.065*
N140.2250 (3)−0.1481 (8)0.95113 (14)0.0548 (9)
H140.2395−0.21130.98380.066*0.50
C150.1735 (3)0.0493 (9)0.94599 (18)0.0554 (10)
H150.15310.12000.97800.066*
C160.1487 (3)0.1559 (9)0.89617 (17)0.0496 (9)
H160.11180.29800.89350.060*
U11U22U33U12U13U23
Ag10.0385 (5)0.0570 (12)0.0501 (11)0.0024 (7)0.0122 (7)0.0237 (7)
I10.0575 (7)0.0881 (15)0.0641 (12)0.0079 (8)0.0091 (7)0.0217 (8)
I20.0617 (7)0.0853 (14)0.0660 (13)−0.0011 (7)0.0104 (8)0.0195 (8)
O10.0526 (15)0.0558 (16)0.0368 (13)0.0087 (13)0.0033 (11)−0.0008 (12)
O20.0654 (18)0.0475 (15)0.0346 (13)0.0040 (13)0.0098 (12)0.0017 (12)
C10.0356 (16)0.0426 (18)0.0354 (17)−0.0036 (14)0.0042 (13)−0.0003 (15)
C20.043 (2)0.052 (2)0.045 (2)0.0030 (16)0.0026 (16)0.0053 (17)
C30.041 (3)0.048 (3)0.056 (3)0.0000.003 (2)0.000
C110.0388 (17)0.0441 (18)0.0345 (17)−0.0064 (14)0.0069 (13)−0.0018 (15)
C120.056 (2)0.046 (2)0.0383 (19)−0.0009 (17)0.0077 (16)−0.0010 (16)
C130.071 (3)0.047 (2)0.043 (2)0.0023 (18)0.0070 (19)0.0031 (17)
N140.067 (2)0.061 (2)0.0355 (17)−0.0051 (19)0.0039 (15)0.0048 (16)
C150.060 (2)0.072 (3)0.0348 (19)−0.003 (2)0.0105 (17)−0.006 (2)
C160.051 (2)0.061 (2)0.0378 (19)0.0045 (19)0.0076 (15)−0.0029 (18)
Ag1—I12.882 (3)C11—C121.378 (6)
Ag1—I22.909 (3)C11—C161.404 (5)
O1—C11.313 (5)C12—C131.376 (6)
O1—C21.459 (5)C12—H120.9500
O2—C11.207 (5)C13—N141.339 (6)
C1—C111.501 (5)C13—H130.9500
C2—C31.498 (5)N14—C151.322 (6)
C2—H2A0.9900N14—H140.8800
C2—H2B0.9900C15—C161.372 (6)
C3—C2i1.498 (5)C15—H150.9500
C3—H3A0.9900C16—H160.9500
I1—Ag1—I2179.44 (19)C16—C11—C1122.2 (4)
C1—O1—C2118.1 (3)C13—C12—C11119.4 (4)
O2—C1—O1125.4 (3)C13—C12—H12120.3
O2—C1—C11122.8 (3)C11—C12—H12120.3
O1—C1—C11111.9 (3)N14—C13—C12121.1 (4)
O1—C2—C3107.4 (3)N14—C13—H13119.5
O1—C2—H2A110.2C12—C13—H13119.5
C3—C2—H2A110.2C15—N14—C13120.2 (4)
O1—C2—H2B110.2C15—N14—H14119.9
C3—C2—H2B110.2C13—N14—H14119.9
H2A—C2—H2B108.5N14—C15—C16122.5 (4)
C2—C3—C2i113.2 (5)N14—C15—H15118.8
C2—C3—H3A109.0C16—C15—H15118.8
C2i—C3—H3A108.8C15—C16—C11118.0 (4)
C12—C11—C16118.9 (4)C15—C16—H16121.0
C12—C11—C1118.9 (3)C11—C16—H16121.0
C2—O1—C1—O2−1.3 (6)C16—C11—C12—C13−1.7 (6)
C2—O1—C1—C11179.4 (3)C1—C11—C12—C13178.3 (4)
C1—O1—C2—C3157.3 (4)C11—C12—C13—N141.9 (7)
O1—C2—C3—C2i−68.0 (3)C12—C13—N14—C15−1.0 (7)
O2—C1—C11—C122.1 (6)C13—N14—C15—C160.0 (7)
O1—C1—C11—C12−178.6 (3)N14—C15—C16—C110.2 (7)
O2—C1—C11—C16−177.9 (4)C12—C11—C16—C150.7 (6)
O1—C1—C11—C161.4 (5)C1—C11—C16—C15−179.3 (4)
D—H···AD—HH···AD···AD—H···A
N14—H14···N14ii0.881.802.684 (7)176.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N14—H14⋯N14i0.881.802.684 (7)176

Symmetry code: (i) .

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