| Literature DB >> 22199475 |
Jing-Hao Hao1, Jian-Ling Wang.
Abstract
In the title compound, [Zn(C(8)H(6)N(5)O(4))(2)(H(2)O)(2)], the six-coordinate Zn(II) ion, which is located on an inversion center, has a distorted octa-hedral configuration. Each 5-carb-oxy-2-[(1H-1,2,4-triazol-1-yl)meth-yl]-1H-imidazole-4-carboxyl-ate ligand chelates to the Zn(II) ion through a triazole N atom and a carboxyl-ate O atom in the equatorial plane. The coordination sphere is completed by two water mol-ecules in axial positions. There is an intra-molecular O-H⋯O hydrogen bond in the ligand. In the crystal, mol-ecules are linked via inter-molecular O-H⋯O, O-H⋯N and N-H⋯N hydrogen bonds, forming a three-dimensional structure.Entities:
Year: 2011 PMID: 22199475 PMCID: PMC3238584 DOI: 10.1107/S160053681104387X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C8H6N5O4)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2869 reflections |
| θ = 2.2–30.8° | |
| µ = 1.26 mm−1 | |
| β = 96.22 (3)° | Blocky, colourless |
| 0.15 × 0.15 × 0.10 mm | |
| Rigaku Mercury CCD diffractometer | 2048 independent reflections |
| Radiation source: fine-focus sealed tube | 1783 reflections with |
| graphite | |
| ω scans | θmax = 26.0°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 8121 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2048 reflections | (Δ/σ)max < 0.001 |
| 177 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.4693 (4) | 0.6509 (2) | 0.7392 (3) | 0.0374 (8) | |
| H1 | 0.5221 | 0.6068 | 0.6867 | 0.045* | |
| C2 | 0.4094 (4) | 0.7314 (2) | 0.9126 (3) | 0.0335 (7) | |
| H2 | 0.4072 | 0.7573 | 1.0037 | 0.040* | |
| C3 | 0.1835 (4) | 0.8324 (2) | 0.7795 (3) | 0.0324 (7) | |
| H3A | 0.1465 | 0.8456 | 0.8738 | 0.039* | |
| H3B | 0.0816 | 0.8131 | 0.7164 | 0.039* | |
| C4 | 0.2560 (4) | 0.91683 (19) | 0.7197 (3) | 0.0238 (6) | |
| C5 | 0.4032 (4) | 1.03992 (19) | 0.6977 (3) | 0.0227 (6) | |
| C6 | 0.5302 (4) | 1.1118 (2) | 0.7490 (3) | 0.0270 (6) | |
| C7 | 0.3112 (4) | 1.02311 (19) | 0.5658 (3) | 0.0223 (6) | |
| C8 | 0.2953 (4) | 1.0733 (2) | 0.4267 (3) | 0.0252 (6) | |
| N1 | 0.3107 (3) | 0.75838 (17) | 0.7936 (3) | 0.0283 (6) | |
| N2 | 0.3478 (3) | 0.70673 (18) | 0.6789 (3) | 0.0352 (6) | |
| N3 | 0.5109 (3) | 0.66274 (18) | 0.8832 (3) | 0.0348 (6) | |
| N4 | 0.3662 (3) | 0.97318 (16) | 0.7941 (2) | 0.0242 (5) | |
| N5 | 0.2194 (3) | 0.94454 (16) | 0.5827 (2) | 0.0250 (5) | |
| H5A | 0.1505 | 0.9178 | 0.5168 | 0.030* | |
| O1 | 0.5950 (3) | 1.10733 (15) | 0.8783 (2) | 0.0345 (5) | |
| O2 | 0.5641 (3) | 1.17290 (14) | 0.6601 (2) | 0.0338 (5) | |
| O3 | 0.3923 (3) | 1.14527 (14) | 0.4209 (2) | 0.0350 (5) | |
| H3C | 0.4537 | 1.1587 | 0.4996 | 0.042* | |
| O4 | 0.1948 (3) | 1.04696 (16) | 0.3247 (2) | 0.0363 (5) | |
| O5 | 0.2866 (4) | 1.0846 (2) | 1.0514 (3) | 0.0512 (8) | |
| H5B | 0.266 (6) | 1.082 (3) | 1.127 (5) | 0.081 (18)* | |
| H5C | 0.272 (6) | 1.133 (3) | 1.017 (5) | 0.080 (18)* | |
| Zn1 | 0.5000 | 1.0000 | 1.0000 | 0.03113 (18) |
| C1 | 0.0402 (19) | 0.0351 (19) | 0.0368 (19) | 0.0051 (15) | 0.0033 (15) | −0.0006 (14) |
| C2 | 0.0437 (19) | 0.0294 (17) | 0.0254 (16) | −0.0050 (14) | −0.0058 (13) | −0.0005 (13) |
| C3 | 0.0290 (16) | 0.0310 (17) | 0.0362 (18) | −0.0006 (13) | −0.0008 (13) | 0.0056 (13) |
| C4 | 0.0250 (14) | 0.0256 (15) | 0.0203 (14) | 0.0018 (12) | 0.0004 (11) | 0.0021 (11) |
| C5 | 0.0253 (15) | 0.0226 (14) | 0.0208 (14) | 0.0033 (12) | 0.0054 (11) | 0.0002 (11) |
| C6 | 0.0279 (16) | 0.0260 (16) | 0.0273 (16) | 0.0006 (12) | 0.0040 (12) | −0.0058 (12) |
| C7 | 0.0236 (14) | 0.0243 (15) | 0.0189 (14) | 0.0034 (11) | 0.0020 (11) | 0.0014 (11) |
| C8 | 0.0278 (15) | 0.0261 (15) | 0.0222 (15) | 0.0066 (12) | 0.0050 (12) | 0.0020 (12) |
| N1 | 0.0325 (14) | 0.0270 (14) | 0.0250 (13) | −0.0020 (11) | 0.0004 (10) | 0.0035 (10) |
| N2 | 0.0417 (15) | 0.0376 (16) | 0.0256 (14) | 0.0011 (13) | −0.0005 (11) | −0.0016 (11) |
| N3 | 0.0368 (15) | 0.0339 (15) | 0.0314 (14) | 0.0013 (12) | −0.0060 (11) | 0.0046 (11) |
| N4 | 0.0283 (13) | 0.0260 (13) | 0.0181 (12) | −0.0002 (10) | 0.0013 (10) | 0.0006 (9) |
| N5 | 0.0254 (12) | 0.0279 (14) | 0.0204 (12) | 0.0009 (10) | −0.0038 (10) | −0.0012 (10) |
| O1 | 0.0425 (13) | 0.0377 (13) | 0.0225 (11) | −0.0097 (10) | 0.0000 (9) | −0.0058 (9) |
| O2 | 0.0404 (12) | 0.0284 (12) | 0.0328 (12) | −0.0072 (10) | 0.0050 (9) | 0.0021 (9) |
| O3 | 0.0446 (13) | 0.0335 (13) | 0.0268 (11) | −0.0012 (10) | 0.0026 (10) | 0.0074 (9) |
| O4 | 0.0393 (13) | 0.0472 (14) | 0.0207 (11) | 0.0009 (10) | −0.0044 (9) | 0.0056 (10) |
| O5 | 0.0620 (18) | 0.068 (2) | 0.0239 (14) | 0.0243 (15) | 0.0062 (12) | 0.0123 (13) |
| Zn1 | 0.0372 (3) | 0.0384 (3) | 0.0165 (3) | −0.0026 (2) | −0.0028 (2) | 0.0000 (2) |
| C1—N2 | 1.322 (4) | C6—O2 | 1.265 (3) |
| C1—N3 | 1.353 (4) | C7—N5 | 1.371 (4) |
| C1—H1 | 0.9300 | C7—C8 | 1.482 (4) |
| C2—N3 | 1.322 (4) | C8—O4 | 1.220 (3) |
| C2—N1 | 1.332 (4) | C8—O3 | 1.298 (3) |
| C2—H2 | 0.9300 | N1—N2 | 1.363 (3) |
| C3—N1 | 1.459 (4) | N4—Zn1 | 2.110 (2) |
| C3—C4 | 1.491 (4) | N5—H5A | 0.8600 |
| C3—H3A | 0.9700 | O1—Zn1 | 2.115 (2) |
| C3—H3B | 0.9700 | O3—H3C | 0.8500 |
| C4—N4 | 1.325 (4) | O5—Zn1 | 2.154 (3) |
| C4—N5 | 1.337 (3) | O5—H5B | 0.73 (5) |
| C5—C7 | 1.370 (4) | O5—H5C | 0.78 (5) |
| C5—N4 | 1.377 (3) | Zn1—N4i | 2.110 (2) |
| C5—C6 | 1.482 (4) | Zn1—O1i | 2.115 (2) |
| C6—O1 | 1.252 (3) | Zn1—O5i | 2.154 (3) |
| N2—C1—N3 | 114.9 (3) | N2—N1—C3 | 122.6 (2) |
| N2—C1—H1 | 122.6 | C1—N2—N1 | 102.2 (2) |
| N3—C1—H1 | 122.6 | C2—N3—C1 | 102.7 (3) |
| N3—C2—N1 | 110.6 (3) | C4—N4—C5 | 105.7 (2) |
| N3—C2—H2 | 124.7 | C4—N4—Zn1 | 144.30 (19) |
| N1—C2—H2 | 124.7 | C5—N4—Zn1 | 109.97 (18) |
| N1—C3—C4 | 112.2 (2) | C4—N5—C7 | 107.9 (2) |
| N1—C3—H3A | 109.2 | C4—N5—H5A | 126.1 |
| C4—C3—H3A | 109.2 | C7—N5—H5A | 126.1 |
| N1—C3—H3B | 109.2 | C6—O1—Zn1 | 115.28 (18) |
| C4—C3—H3B | 109.2 | C8—O3—H3C | 115.0 |
| H3A—C3—H3B | 107.9 | Zn1—O5—H5B | 115 (4) |
| N4—C4—N5 | 111.3 (2) | Zn1—O5—H5C | 121 (4) |
| N4—C4—C3 | 124.7 (2) | H5B—O5—H5C | 114 (5) |
| N5—C4—C3 | 124.0 (3) | N4—Zn1—N4i | 180.000 (1) |
| C7—C5—N4 | 109.3 (2) | N4—Zn1—O1i | 100.52 (8) |
| C7—C5—C6 | 132.5 (3) | N4i—Zn1—O1i | 79.48 (8) |
| N4—C5—C6 | 118.3 (2) | N4—Zn1—O1 | 79.48 (8) |
| O1—C6—O2 | 125.1 (3) | N4i—Zn1—O1 | 100.52 (8) |
| O1—C6—C5 | 116.8 (3) | O1i—Zn1—O1 | 180.00 (8) |
| O2—C6—C5 | 118.1 (3) | N4—Zn1—O5i | 90.04 (10) |
| C5—C7—N5 | 105.8 (2) | N4i—Zn1—O5i | 89.96 (10) |
| C5—C7—C8 | 132.6 (3) | O1i—Zn1—O5i | 90.32 (11) |
| N5—C7—C8 | 121.6 (2) | O1—Zn1—O5i | 89.68 (11) |
| O4—C8—O3 | 123.1 (3) | N4—Zn1—O5 | 89.96 (10) |
| O4—C8—C7 | 120.4 (3) | N4i—Zn1—O5 | 90.04 (10) |
| O3—C8—C7 | 116.6 (3) | O1i—Zn1—O5 | 89.68 (11) |
| C2—N1—N2 | 109.5 (3) | O1—Zn1—O5 | 90.32 (11) |
| C2—N1—C3 | 127.8 (3) | O5i—Zn1—O5 | 180.000 (1) |
| N1—C3—C4—N4 | −76.1 (4) | C3—C4—N4—Zn1 | −3.2 (5) |
| N1—C3—C4—N5 | 102.9 (3) | C7—C5—N4—C4 | 1.0 (3) |
| C7—C5—C6—O1 | −178.8 (3) | C6—C5—N4—C4 | −177.7 (2) |
| N4—C5—C6—O1 | −0.6 (4) | C7—C5—N4—Zn1 | −178.12 (17) |
| C7—C5—C6—O2 | 1.6 (5) | C6—C5—N4—Zn1 | 3.2 (3) |
| N4—C5—C6—O2 | 179.9 (2) | N4—C4—N5—C7 | 0.3 (3) |
| N4—C5—C7—N5 | −0.8 (3) | C3—C4—N5—C7 | −178.8 (3) |
| C6—C5—C7—N5 | 177.6 (3) | C5—C7—N5—C4 | 0.3 (3) |
| N4—C5—C7—C8 | 177.3 (3) | C8—C7—N5—C4 | −178.0 (2) |
| C6—C5—C7—C8 | −4.3 (5) | O2—C6—O1—Zn1 | 177.0 (2) |
| C5—C7—C8—O4 | −175.5 (3) | C5—C6—O1—Zn1 | −2.5 (3) |
| N5—C7—C8—O4 | 2.3 (4) | C4—N4—Zn1—N4i | −159 (100) |
| C5—C7—C8—O3 | 4.4 (5) | C5—N4—Zn1—N4i | 20 (100) |
| N5—C7—C8—O3 | −177.8 (2) | C4—N4—Zn1—O1i | −1.8 (3) |
| N3—C2—N1—N2 | −0.6 (3) | C5—N4—Zn1—O1i | 176.69 (17) |
| N3—C2—N1—C3 | −179.2 (3) | C4—N4—Zn1—O1 | 178.2 (3) |
| C4—C3—N1—C2 | 99.6 (3) | C5—N4—Zn1—O1 | −3.31 (17) |
| C4—C3—N1—N2 | −78.8 (3) | C4—N4—Zn1—O5i | 88.5 (3) |
| N3—C1—N2—N1 | 0.5 (4) | C5—N4—Zn1—O5i | −93.0 (2) |
| C2—N1—N2—C1 | 0.1 (3) | C4—N4—Zn1—O5 | −91.5 (3) |
| C3—N1—N2—C1 | 178.8 (3) | C5—N4—Zn1—O5 | 87.0 (2) |
| N1—C2—N3—C1 | 0.9 (3) | C6—O1—Zn1—N4 | 3.3 (2) |
| N2—C1—N3—C2 | −0.9 (4) | C6—O1—Zn1—N4i | −176.7 (2) |
| N5—C4—N4—C5 | −0.8 (3) | C6—O1—Zn1—O1i | −136 (100) |
| C3—C4—N4—C5 | 178.3 (3) | C6—O1—Zn1—O5i | 93.4 (2) |
| N5—C4—N4—Zn1 | 177.7 (2) | C6—O1—Zn1—O5 | −86.6 (2) |
| H··· | ||||
| N5—H5A···N3ii | 0.86 | 1.95 | 2.801 (4) | 170 |
| O3—H3C···O2 | 0.85 | 1.65 | 2.493 (3) | 173 |
| O5—H5B···O4iii | 0.73 (5) | 2.04 (5) | 2.764 (4) | 168 (5) |
| O5—H5C···N2iv | 0.78 (5) | 2.23 (5) | 2.896 (4) | 143 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5 | 0.86 | 1.95 | 2.801 (4) | 170 |
| O3—H3 | 0.85 | 1.65 | 2.493 (3) | 173 |
| O5—H5 | 0.73 (5) | 2.04 (5) | 2.764 (4) | 168 (5) |
| O5—H5 | 0.78 (5) | 2.23 (5) | 2.896 (4) | 143 (5) |
Symmetry codes: (i) ; (ii) ; (iii) .