Literature DB >> 21579014

Diaqua-bis{5-carboxy-2-[(1H-1,2,4-triazol-1-yl)-meth-yl]-1H-imidazole-4-carboxyl-ato}-manganese(II).

De-Gang Ding1, Yan Tong.   

Abstract

In the title compound, [Mn(C(8)H(6)N(5)O(4))(2)(H(2)O)(2)], the Mn(II) ion is situated on an inversion center and is six-coordinated by two N and two O atoms from two L ligands (HL = 2-[(1H-1,2,4-triazol-1-yl)meth-yl]-1H-imidazole-4,5-dicarboxylic acid) and two water mol-ecules in a distorted octa-hedral geometry. In ligand L, the imidazole and triazole rings form a dihedral angle of 74.25 (8)°. Mol-ecules are assembled into a three-dimensional structure via inter-molecular O-H⋯O, O-H⋯N and N-H⋯N hydrogen-bonds, and π-π inter-actions with a short distance of 3.665 (2) Å between the centroids of the imidazole and triazole rings of neighbouring mol-ecules.

Entities:  

Year:  2010        PMID: 21579014      PMCID: PMC2979128          DOI: 10.1107/S1600536810012626

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Lee et al. (2005 ▶); Ouellette et al. (2007 ▶); Won et al. (2007 ▶).

Experimental

Crystal data

[Mn(C8H6N5O4)2(H2O)2] M = 563.33 Monoclinic, a = 7.730 (2) Å b = 14.498 (3) Å c = 11.588 (4) Å β = 125.70 (2)° V = 1054.6 (5) Å3 Z = 2 Mo Kα radiation μ = 0.71 mm−1 T = 293 K 0.20 × 0.15 × 0.10 mm

Data collection

Rigaku Mercury CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2000 ▶) T min = 0.871, T max = 0.933 11281 measured reflections 2074 independent reflections 1974 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.077 S = 1.05 2074 reflections 169 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.25 e Å−3 Data collection: CrystalClear (Rigaku, 2000 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810012626/cv2709sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810012626/cv2709Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C8H6N5O4)2(H2O)2]F(000) = 574
Mr = 563.33Dx = 1.774 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3276 reflections
a = 7.730 (2) Åθ = 2.6–30.8°
b = 14.498 (3) ŵ = 0.71 mm1
c = 11.588 (4) ÅT = 293 K
β = 125.70 (2)°Prism, pink
V = 1054.6 (5) Å30.20 × 0.15 × 0.10 mm
Z = 2
Rigaku Mercury CCD area-detector diffractometer2074 independent reflections
Radiation source: fine-focus sealed tube1974 reflections with I > 2σ(I)
graphiteRint = 0.033
ω scansθmax = 26.0°, θmin = 2.6°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000)h = −9→9
Tmin = 0.871, Tmax = 0.933k = −17→17
11281 measured reflectionsl = −13→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0245P)2 + 0.947P] where P = (Fo2 + 2Fc2)/3
2074 reflections(Δ/σ)max < 0.001
169 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn1−0.50000.00000.00000.02963 (14)
O1−0.2806 (2)0.11091 (10)0.13249 (15)0.0333 (4)
O2−0.0902 (2)0.17418 (10)0.34848 (15)0.0319 (3)
O3−0.0253 (2)0.14770 (10)0.58250 (15)0.0328 (4)
H3C−0.04910.15960.49080.049*
O4−0.1284 (2)0.04886 (11)0.67687 (15)0.0353 (4)
O5−0.7693 (3)0.08739 (13)−0.05545 (17)0.0516 (5)
H5B−0.75490.1335−0.01550.077*
H5C−0.87570.0886−0.13460.077*
N1−0.4778 (3)−0.24271 (11)0.21460 (17)0.0247 (4)
N2−0.3256 (3)−0.29594 (12)0.32424 (18)0.0316 (4)
N3−0.3707 (3)−0.33526 (13)0.12013 (18)0.0318 (4)
N4−0.4235 (3)−0.02708 (11)0.21633 (16)0.0229 (4)
N5−0.3572 (3)−0.05521 (11)0.42541 (16)0.0221 (4)
H5A−0.3594−0.08200.49070.026*
C1−0.2671 (4)−0.34974 (16)0.2612 (2)0.0337 (5)
H1A−0.1620−0.39450.31010.040*
C2−0.5007 (4)−0.26688 (14)0.0956 (2)0.0290 (5)
H2A−0.5952−0.23940.00740.035*
C3−0.5880 (3)−0.16935 (14)0.2336 (2)0.0283 (5)
H3A−0.6208−0.19020.29840.034*
H3B−0.7215−0.15590.14300.034*
C4−0.4575 (3)−0.08370 (13)0.2908 (2)0.0219 (4)
C5−0.2913 (3)0.04042 (13)0.30983 (19)0.0208 (4)
C6−0.2149 (3)0.11379 (14)0.2602 (2)0.0249 (4)
C7−0.2507 (3)0.02413 (13)0.44029 (19)0.0212 (4)
C8−0.1284 (3)0.07527 (14)0.5765 (2)0.0252 (4)
U11U22U33U12U13U23
Mn10.0324 (3)0.0372 (3)0.0167 (2)−0.0015 (2)0.0129 (2)0.00040 (18)
O10.0379 (9)0.0365 (9)0.0233 (8)−0.0041 (7)0.0166 (7)0.0066 (6)
O20.0335 (8)0.0273 (8)0.0316 (8)−0.0063 (6)0.0172 (7)−0.0006 (6)
O30.0347 (8)0.0307 (8)0.0279 (8)−0.0076 (7)0.0153 (7)−0.0074 (6)
O40.0384 (9)0.0452 (10)0.0207 (8)−0.0050 (7)0.0162 (7)−0.0059 (7)
O50.0416 (10)0.0684 (13)0.0262 (9)0.0132 (9)0.0093 (8)−0.0137 (8)
N10.0317 (9)0.0216 (9)0.0235 (9)−0.0040 (7)0.0176 (8)−0.0033 (7)
N20.0376 (10)0.0316 (10)0.0224 (9)−0.0003 (8)0.0156 (8)0.0009 (7)
N30.0410 (11)0.0312 (10)0.0293 (10)−0.0014 (8)0.0240 (9)−0.0032 (8)
N40.0250 (8)0.0240 (9)0.0175 (8)−0.0010 (7)0.0111 (7)−0.0016 (6)
N50.0268 (9)0.0229 (9)0.0185 (8)0.0000 (7)0.0144 (7)0.0004 (6)
C10.0351 (12)0.0332 (12)0.0300 (12)0.0032 (10)0.0174 (10)0.0006 (9)
C20.0410 (12)0.0249 (11)0.0227 (10)−0.0040 (9)0.0196 (10)−0.0022 (8)
C30.0330 (11)0.0243 (11)0.0332 (11)−0.0039 (9)0.0225 (10)−0.0057 (9)
C40.0230 (10)0.0213 (10)0.0217 (10)0.0002 (8)0.0133 (8)−0.0016 (8)
C50.0210 (9)0.0201 (9)0.0189 (9)0.0021 (8)0.0102 (8)0.0004 (8)
C60.0234 (10)0.0238 (10)0.0240 (10)0.0033 (8)0.0119 (9)0.0046 (8)
C70.0207 (9)0.0214 (10)0.0188 (9)0.0019 (8)0.0100 (8)0.0004 (7)
C80.0227 (10)0.0274 (11)0.0211 (10)0.0034 (8)0.0102 (8)−0.0025 (8)
Mn1—O5i2.1886 (17)N2—C11.316 (3)
Mn1—O52.1886 (17)N3—C21.319 (3)
Mn1—O1i2.1862 (16)N3—C11.353 (3)
Mn1—O12.1862 (16)N4—C41.324 (2)
Mn1—N42.2489 (18)N4—C51.373 (2)
Mn1—N4i2.2489 (18)N5—C41.339 (2)
O1—C61.254 (2)N5—C71.366 (2)
O2—C61.262 (2)N5—H5A0.8600
O3—C81.296 (3)C1—H1A0.9300
O3—H3C0.9817C2—H2A0.9300
O4—C81.224 (2)C3—C41.489 (3)
O5—H5B0.7826C3—H3A0.9700
O5—H5C0.7987C3—H3B0.9700
N1—C21.331 (3)C5—C71.373 (3)
N1—N21.360 (2)C5—C61.486 (3)
N1—C31.458 (3)C7—C81.481 (3)
O5i—Mn1—O5180.00 (12)C4—N5—H5A126.2
O5i—Mn1—O1i89.74 (7)C7—N5—H5A126.2
O5—Mn1—O1i90.26 (7)N2—C1—N3115.2 (2)
O5i—Mn1—O190.26 (7)N2—C1—H1A122.4
O5—Mn1—O189.74 (7)N3—C1—H1A122.4
O1i—Mn1—O1180.00 (10)N3—C2—N1110.49 (19)
O5i—Mn1—N489.15 (6)N3—C2—H2A124.8
O5—Mn1—N490.85 (6)N1—C2—H2A124.8
O1i—Mn1—N4104.25 (6)N1—C3—C4111.81 (16)
O1—Mn1—N475.75 (6)N1—C3—H3A109.3
O5i—Mn1—N4i90.85 (6)C4—C3—H3A109.3
O5—Mn1—N4i89.15 (6)N1—C3—H3B109.3
O1i—Mn1—N4i75.75 (6)C4—C3—H3B109.3
O1—Mn1—N4i104.25 (6)H3A—C3—H3B107.9
N4—Mn1—N4i180.00 (11)N4—C4—N5111.56 (17)
C6—O1—Mn1117.87 (13)N4—C4—C3124.59 (17)
C8—O3—H3C111.3N5—C4—C3123.85 (18)
Mn1—O5—H5B122.5N4—C5—C7109.45 (17)
Mn1—O5—H5C121.0N4—C5—C6119.06 (16)
H5B—O5—H5C110.9C7—C5—C6131.47 (18)
C2—N1—N2109.77 (17)O1—C6—O2124.89 (19)
C2—N1—C3127.77 (18)O1—C6—C5117.01 (18)
N2—N1—C3122.43 (16)O2—C6—C5118.10 (17)
C1—N2—N1102.01 (17)N5—C7—C5105.79 (16)
C2—N3—C1102.53 (18)N5—C7—C8121.25 (17)
C4—N4—C5105.50 (15)C5—C7—C8132.93 (18)
C4—N4—Mn1144.26 (13)O4—C8—O3122.92 (18)
C5—N4—Mn1110.24 (12)O4—C8—C7120.16 (19)
C4—N5—C7107.68 (16)O3—C8—C7116.91 (18)
O5i—Mn1—O1—C6−90.63 (15)C5—N4—C4—C3−178.15 (18)
O5—Mn1—O1—C689.37 (15)Mn1—N4—C4—C32.4 (4)
O1i—Mn1—O1—C6178 (100)C7—N5—C4—N4−0.3 (2)
N4—Mn1—O1—C6−1.57 (14)C7—N5—C4—C3178.78 (18)
N4i—Mn1—O1—C6178.43 (14)N1—C3—C4—N473.8 (2)
C2—N1—N2—C1−0.1 (2)N1—C3—C4—N5−105.2 (2)
C3—N1—N2—C1−178.39 (18)C4—N4—C5—C7−1.2 (2)
O5i—Mn1—N4—C4−87.9 (2)Mn1—N4—C5—C7178.46 (12)
O5—Mn1—N4—C492.1 (2)C4—N4—C5—C6177.62 (17)
O1i—Mn1—N4—C41.6 (2)Mn1—N4—C5—C6−2.7 (2)
O1—Mn1—N4—C4−178.4 (2)Mn1—O1—C6—O2−179.15 (15)
N4i—Mn1—N4—C4171 (100)Mn1—O1—C6—C50.6 (2)
O5i—Mn1—N4—C592.68 (13)N4—C5—C6—O11.6 (3)
O5—Mn1—N4—C5−87.32 (13)C7—C5—C6—O1−179.9 (2)
O1i—Mn1—N4—C5−177.81 (12)N4—C5—C6—O2−178.64 (17)
O1—Mn1—N4—C52.19 (12)C7—C5—C6—O2−0.1 (3)
N4i—Mn1—N4—C5−9(100)C4—N5—C7—C5−0.4 (2)
N1—N2—C1—N3−0.3 (2)C4—N5—C7—C8177.95 (17)
C2—N3—C1—N20.6 (3)N4—C5—C7—N51.0 (2)
C1—N3—C2—N1−0.7 (2)C6—C5—C7—N5−177.59 (19)
N2—N1—C2—N30.6 (2)N4—C5—C7—C8−177.1 (2)
C3—N1—C2—N3178.69 (18)C6—C5—C7—C84.3 (4)
C2—N1—C3—C4−97.8 (2)N5—C7—C8—O4−3.0 (3)
N2—N1—C3—C480.2 (2)C5—C7—C8—O4174.9 (2)
C5—N4—C4—N50.9 (2)N5—C7—C8—O3177.23 (17)
Mn1—N4—C4—N5−178.52 (16)C5—C7—C8—O3−4.9 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3C···O20.981.502.483 (2)178
O5—H5B···N2ii0.782.182.878 (2)149
O5—H5C···O4iii0.801.982.755 (2)162
N5—H5A···N3iv0.861.962.811 (2)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3C⋯O20.981.502.483 (2)178
O5—H5B⋯N2i0.782.182.878 (2)149
O5—H5C⋯O4ii0.801.982.755 (2)162
N5—H5A⋯N3iii0.861.962.811 (2)169

Symmetry codes: (i) ; (ii) ; (iii) .

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