Literature DB >> 22195200

An OWL meta-ontology for representing the Clinical Element Model.

Cui Tao1, Craig G Parker, Thomas A Oniki, Jyotishman Pathak, Stanley M Huff, Christopher G Chute.   

Abstract

The Clinical Element Model (CEM) is a strategy designed to represent logical models for clinical data elements to ensure unambiguous data representation, interpretation, and exchange within and across heterogeneous sources and applications. The current representations of CEMs have limitations on expressing semantics and formal definitions of the structure and the semantics. Here we introduce our initial efforts on representing the CEM in OWL, so that the enrichment with OWL semantics and further semantic processing can be achieved in CEM. The focus of this paper is the CEM meta-ontology where the basic structures, the properties and their relationships, and the constraints are defined. These OWL representation specifications have been reviewed by CEM experts to ensure they capture the intended meaning of the model faithfully.

Mesh:

Year:  2011        PMID: 22195200      PMCID: PMC3243162     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  5 in total

1.  Building a logical EHR architecture based on ISO 13606 standard and semantic web technologies.

Authors:  Marcelo R Santos; Marcello P Bax; Dipak Kalra
Journal:  Stud Health Technol Inform       Date:  2010

2.  Early experiences in evolving an enterprise-wide information model for laboratory and clinical observations.

Authors:  Elizabeth S Chen; Li Zhou; Vipul Kashyap; Molly Schaeffer; Patricia C Dykes; Howard S Goldberg
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

3.  A model-driven approach for representing clinical archetypes for Semantic Web environments.

Authors:  Catalina Martínez-Costa; Marcos Menárguez-Tortosa; Jesualdo Tomás Fernández-Breis; José Alberto Maldonado
Journal:  J Biomed Inform       Date:  2008-05-23       Impact factor: 6.317

4.  Systematized nomenclature of medicine clinical terms (SNOMED CT) to represent computed tomography procedures.

Authors:  Thuppahi Sisira De Silva; Don MacDonald; Grace Paterson; Khokan C Sikdar; Bonnie Cochrane
Journal:  Comput Methods Programs Biomed       Date:  2011-03       Impact factor: 5.428

5.  Towards Semantic-Web Based Representation and Harmonization of Standard Meta-data Models for Clinical Studies.

Authors:  Cui Tao; Guoqian Jiang; Weiqi Wei; Harold R Solbrig; Christopher G Chute
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2011-03-07
  5 in total
  7 in total

1.  A semantic-web oriented representation of the clinical element model for secondary use of electronic health records data.

Authors:  Cui Tao; Guoqian Jiang; Thomas A Oniki; Robert R Freimuth; Qian Zhu; Deepak Sharma; Jyotishman Pathak; Stanley M Huff; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2012-12-25       Impact factor: 4.497

2.  Lessons learned in detailed clinical modeling at Intermountain Healthcare.

Authors:  Thomas A Oniki; Joseph F Coyle; Craig G Parker; Stanley M Huff
Journal:  J Am Med Inform Assoc       Date:  2014-07-03       Impact factor: 4.497

3.  Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: the SHARPn project.

Authors:  Susan Rea; Jyotishman Pathak; Guergana Savova; Thomas A Oniki; Les Westberg; Calvin E Beebe; Cui Tao; Craig G Parker; Peter J Haug; Stanley M Huff; Christopher G Chute
Journal:  J Biomed Inform       Date:  2012-02-04       Impact factor: 6.317

4.  Combining infobuttons and semantic web rules for identifying patterns and delivering highly-personalized education materials.

Authors:  Nathan C Hulse; Jie Long; Cui Tao
Journal:  AMIA Annu Symp Proc       Date:  2013-11-16

5.  Modeling and executing electronic health records driven phenotyping algorithms using the NQF Quality Data Model and JBoss® Drools Engine.

Authors:  Dingcheng Li; Cory M Endle; Sahana Murthy; Craig Stancl; Dale Suesse; Davide Sottara; Stanley M Huff; Christopher G Chute; Jyotishman Pathak
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

6.  An information model for computable cancer phenotypes.

Authors:  Harry Hochheiser; Melissa Castine; David Harris; Guergana Savova; Rebecca S Jacobson
Journal:  BMC Med Inform Decis Mak       Date:  2016-09-15       Impact factor: 2.796

7.  Next-generation phenotyping of electronic health records.

Authors:  George Hripcsak; David J Albers
Journal:  J Am Med Inform Assoc       Date:  2012-09-06       Impact factor: 4.497

  7 in total

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