Literature DB >> 22195147

A prototype knowledge base and SMART app to facilitate organization of patient medications by clinical problems.

Allison B McCoy1, Adam Wright, Archana Laxmisan, Hardeep Singh, Dean F Sittig.   

Abstract

Increasing use of electronic health records requires comprehensive patient-centered views of clinical data. We describe a prototype knowledge base and SMART app that facilitates organization of patient medications by clinical problems, comprising a preliminary step in building such patient-centered views. The knowledge base includes 7,164,444 distinct problem-medication links, generated from RxNorm, SNOMED CT, and NDF-RT within the UMLS Metathesaurus. In an evaluation of the knowledge base applied to 5000 de-identified patient records, 22.4% of medications linked to an entry in the patient's active problem list, compared to 32.6% of medications manually linked by providers; 46.5% of total links were unique to the knowledge base, not added by providers. Expert review of a random patient subset estimated a sensitivity of 37.1% and specificity of 98.9%. The SMART API successfully utilized the knowledge base to generate problem-medication links for test patients. Future work is necessary to improve knowledge base sensitivity and efficiency.

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Year:  2011        PMID: 22195147      PMCID: PMC3243226     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  15 in total

1.  The UMLS-CORE project: a study of the problem list terminologies used in large healthcare institutions.

Authors:  Kin Wah Fung; Clement McDonald; Suresh Srinivasan
Journal:  J Am Med Inform Assoc       Date:  2010 Nov-Dec       Impact factor: 4.497

2.  Analyzing categorical information in two publicly available drug terminologies: RxNorm and NDF-RT.

Authors:  Jyotishman Pathak; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2010 Jul-Aug       Impact factor: 4.497

3.  Legal, ethical, and financial dilemmas in electronic health record adoption and use.

Authors:  Dean F Sittig; Hardeep Singh
Journal:  Pediatrics       Date:  2011-03-21       Impact factor: 7.124

4.  No small change for the health information economy.

Authors:  Kenneth D Mandl; Isaac S Kohane
Journal:  N Engl J Med       Date:  2009-03-26       Impact factor: 91.245

5.  Medication and indication linkage: A practical therapy for the problem list?

Authors:  Matthew M Burton; Linas Simonaitis; Gunther Schadow
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

6.  Reducing diagnostic errors through effective communication: harnessing the power of information technology.

Authors:  Hardeep Singh; Aanand Dinkar Naik; Raghuram Rao; Laura Ann Petersen
Journal:  J Gen Intern Med       Date:  2008-04       Impact factor: 5.128

7.  Improving clinical quality indicators through electronic health records: it takes more than just a reminder.

Authors:  Dean F Sittig; Jonathan M Teich; Jerome A Osheroff; Hardeep Singh
Journal:  Pediatrics       Date:  2009-07       Impact factor: 7.124

8.  Establishment of the permanent certification program for health information technology. Final rule.

Authors: 
Journal:  Fed Regist       Date:  2011-01-07

9.  An automated technique for identifying associations between medications, laboratory results and problems.

Authors:  Adam Wright; Elizabeth S Chen; Francine L Maloney
Journal:  J Biomed Inform       Date:  2010-09-25       Impact factor: 6.317

10.  Timely follow-up of abnormal diagnostic imaging test results in an outpatient setting: are electronic medical records achieving their potential?

Authors:  Hardeep Singh; Eric J Thomas; Shrinidi Mani; Dean Sittig; Harvinder Arora; Donna Espadas; Myrna M Khan; Laura A Petersen
Journal:  Arch Intern Med       Date:  2009-09-28
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  6 in total

1.  Development and evaluation of a crowdsourcing methodology for knowledge base construction: identifying relationships between clinical problems and medications.

Authors:  Allison B McCoy; Adam Wright; Archana Laxmisan; Madelene J Ottosen; Jacob A McCoy; David Butten; Dean F Sittig
Journal:  J Am Med Inform Assoc       Date:  2012-05-12       Impact factor: 4.497

Review 2.  Clinical decision support alert appropriateness: a review and proposal for improvement.

Authors:  Allison B McCoy; Eric J Thomas; Marie Krousel-Wood; Dean F Sittig
Journal:  Ochsner J       Date:  2014

3.  Use of a support vector machine for categorizing free-text notes: assessment of accuracy across two institutions.

Authors:  Adam Wright; Allison B McCoy; Stanislav Henkin; Abhivyakti Kale; Dean F Sittig
Journal:  J Am Med Inform Assoc       Date:  2013-03-30       Impact factor: 4.497

4.  Clinical Summarization Capabilities of Commercially-available and Internally-developed Electronic Health Records.

Authors:  Archana Laxmisan; Allison B McCoy; Adam Wright; Dean F Sittig
Journal:  Appl Clin Inform       Date:  2012-02-22       Impact factor: 2.342

5.  Development of a clinician reputation metric to identify appropriate problem-medication pairs in a crowdsourced knowledge base.

Authors:  Allison B McCoy; Adam Wright; Deevakar Rogith; Safa Fathiamini; Allison J Ottenbacher; Dean F Sittig
Journal:  J Biomed Inform       Date:  2013-12-07       Impact factor: 6.317

6.  Health care transformation through collaboration on open-source informatics projects: integrating a medical applications platform, research data repository, and patient summarization.

Authors:  Jeffrey G Klann; Allison B McCoy; Adam Wright; Nich Wattanasin; Dean F Sittig; Shawn N Murphy
Journal:  Interact J Med Res       Date:  2013-05-30
  6 in total

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