Literature DB >> 22189497

Geographic delineations of yeast communities and populations associated with vines and wines in New Zealand.

Velimir Gayevskiy1, Matthew R Goddard.   

Abstract

Yeasts are a diverse seemingly ubiquitous group of eukaryotic microbes, and many are naturally associated with fruits. Humans have harnessed yeasts since the dawn of civilisation to make wine, and thus it is surprising that we know little of the distribution of yeast communities naturally associated with fruits. Previous reports of yeast community diversity have been descriptive only. Here we present, we believe, the first robust test for the geographic delineation of yeast communities. Humans have relatively recently employed Saccharomyces cerevisiae as a model research organism, and have long harnessed its ancient adaption to ferment even in the presence of oxygen. However, as far as we are aware, there has not been a rigorous test for the presence of regional differences in natural S. cerevisiae populations before. We combined these community- and population-level questions and surveyed replicate vineyards and corresponding spontaneous ferments from different regions on New Zealand's (NZ's) North Island and analysed the resulting data with community ecology and population genetic tests. We show that there are distinct regional delineations of yeast communities, but the picture for S. cerevisiae is more complex: there is evidence for region-specific sub-populations but there are also reasonable levels of gene flow among these regions in NZ. We believe this is the first demonstration of regional delineations of yeast populations and communities worldwide.

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Year:  2011        PMID: 22189497      PMCID: PMC3379632          DOI: 10.1038/ismej.2011.195

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  55 in total

1.  Function of yeast species and strains in wine flavour.

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2.  Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.

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Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

3.  Fermenting knowledge: the history of winemaking, science and yeast research.

Authors:  Paul J Chambers; Isak S Pretorius
Journal:  EMBO Rep       Date:  2010-11-12       Impact factor: 8.807

4.  Ecological survey of Saccharomyces cerevisiae strains from vineyards in the Vinho Verde Region of Portugal.

Authors:  Dorit Schuller; Hugo Alves; Sylvie Dequin; Margarida Casal
Journal:  FEMS Microbiol Ecol       Date:  2005-01-01       Impact factor: 4.194

Review 5.  Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

Authors:  P Hugenholtz; B M Goebel; N R Pace
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

6.  Molecular evidence for an ancient duplication of the entire yeast genome.

Authors:  K H Wolfe; D C Shields
Journal:  Nature       Date:  1997-06-12       Impact factor: 49.962

7.  Outcrossed sex allows a selfish gene to invade yeast populations.

Authors:  M R Goddard; D Greig; A Burt
Journal:  Proc Biol Sci       Date:  2001-12-22       Impact factor: 5.349

8.  Analysis of yeast populations during alcoholic fermentation: a six year follow-up study.

Authors:  Gemma Beltran; Maria Jesús Torija; Maite Novo; Noemi Ferrer; Montserrat Poblet; José M Guillamón; Nicolas Rozès; Albert Mas
Journal:  Syst Appl Microbiol       Date:  2002-08       Impact factor: 4.022

9.  Self-fertilization is the main sexual reproduction mechanism in native wine yeast populations.

Authors:  Francisco A Cubillos; Claudia Vásquez; Sylvain Faugeron; Angélica Ganga; Claudio Martínez
Journal:  FEMS Microbiol Ecol       Date:  2008-11-07       Impact factor: 4.194

10.  Quantifying the complexities of Saccharomyces cerevisiae's ecosystem engineering via fermentation.

Authors:  Matthew R Goddard
Journal:  Ecology       Date:  2008-08       Impact factor: 5.499

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  39 in total

1.  Quantifying the relative roles of selective and neutral processes in defining eukaryotic microbial communities.

Authors:  Peter Morrison-Whittle; Matthew R Goddard
Journal:  ISME J       Date:  2015-03-10       Impact factor: 10.302

2.  A parasitic selfish gene that affects host promiscuity.

Authors:  Paulina Giraldo-Perez; Matthew R Goddard
Journal:  Proc Biol Sci       Date:  2013-09-18       Impact factor: 5.349

3.  Why fruit rots: theoretical support for Janzen's theory of microbe-macrobe competition.

Authors:  Graeme D Ruxton; David M Wilkinson; H Martin Schaefer; Thomas N Sherratt
Journal:  Proc Biol Sci       Date:  2014-03-11       Impact factor: 5.349

Review 4.  Genome Diversity and Evolution in the Budding Yeasts (Saccharomycotina).

Authors:  Bernard A Dujon; Edward J Louis
Journal:  Genetics       Date:  2017-06       Impact factor: 4.562

5.  Cellar-Associated Saccharomyces cerevisiae Population Structure Revealed High-Level Diversity and Perennial Persistence at Sauternes Wine Estates.

Authors:  Marine Börlin; Pauline Venet; Olivier Claisse; Franck Salin; Jean-Luc Legras; Isabelle Masneuf-Pomarede
Journal:  Appl Environ Microbiol       Date:  2016-05-02       Impact factor: 4.792

6.  Genetic variability and physiological traits of Saccharomyces cerevisiae strains isolated from "Vale dos Vinhedos" vineyards reflect agricultural practices and history of this Brazilian wet subtropical area.

Authors:  Giulia Crosato; Milena Carlot; Alberto De Iseppi; Juliano Garavaglia; Laura Massochin Nunes Pinto; Denise Righetto Ziegler; Renata Cristina de Souza Ramos; Rochele Cassanta Rossi; Chiara Nadai; Alessio Giacomini; Viviana Corich
Journal:  World J Microbiol Biotechnol       Date:  2018-07-03       Impact factor: 3.312

7.  An indigenous Saccharomyces uvarum population with high genetic diversity dominates uninoculated Chardonnay fermentations at a Canadian winery.

Authors:  Garrett C McCarthy; Sydney C Morgan; Jonathan T Martiniuk; Brianne L Newman; Stephanie E McCann; Vivien Measday; Daniel M Durall
Journal:  PLoS One       Date:  2021-02-04       Impact factor: 3.240

8.  MALDI-TOF MS Supplementary database for species identification employing the yeast diversity encountered on southern Brazil grapes.

Authors:  Bruna Carla Agustini; Gildo Almeida da Silva; Tania Maria Bordin Bonfim
Journal:  Folia Microbiol (Praha)       Date:  2018-05-11       Impact factor: 2.099

9.  Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate.

Authors:  Nicholas A Bokulich; John H Thorngate; Paul M Richardson; David A Mills
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-25       Impact factor: 11.205

10.  Scent of a killer: How could killer yeast boost its dispersal?

Authors:  Claudia C Buser; Jukka Jokela; Oliver Y Martin
Journal:  Ecol Evol       Date:  2021-05-01       Impact factor: 2.912

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