Literature DB >> 22188241

YBR246W is required for the third step of diphthamide biosynthesis.

Xiaoyang Su1, Wei Chen, Wankyu Lee, Hong Jiang, Sheng Zhang, Hening Lin.   

Abstract

Diphthamide, the target of diphtheria toxin, is a post-translationally modified histidine residue that is found in archaeal and eukaryotic translation elongation factor 2. The biosynthesis and function of this modification has attracted the interest of many biochemists for decades. The biosynthesis has been known to proceed in three steps. Proteins required for the first and second steps have been identified, but the protein(s) required for the last step have remained elusive. Here we demonstrate that the YBR246W gene in yeast is required for the last step of diphthamide biosynthesis, as the deletion of YBR246W leads to the accumulation of diphthine, which is the enzymatic product of the second step of the biosynthesis. This discovery will provide important information leading to the complete elucidation of the full biosynthesis pathway of diphthamide.
© 2011 American Chemical Society

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Year:  2011        PMID: 22188241      PMCID: PMC3264676          DOI: 10.1021/ja208870a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  24 in total

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Journal:  J Biol Chem       Date:  1974-08-25       Impact factor: 5.157

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Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

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Journal:  Mol Cell Biol       Date:  1984-04       Impact factor: 4.272

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Journal:  J Biol Chem       Date:  1980-11-25       Impact factor: 5.157

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Authors:  B G Van Ness; J B Howard; J W Bodley
Journal:  J Biol Chem       Date:  1980-11-25       Impact factor: 5.157

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Authors:  P C Dunlop; J W Bodley
Journal:  J Biol Chem       Date:  1983-04-25       Impact factor: 5.157

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Authors:  A M Pappenheimer; P C Dunlop; K W Adolph; J W Bodley
Journal:  J Bacteriol       Date:  1983-03       Impact factor: 3.490

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Authors:  J Y Chen; J W Bodley; D M Livingston
Journal:  Mol Cell Biol       Date:  1985-12       Impact factor: 4.272

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Authors:  R J Collier
Journal:  Toxicon       Date:  2001-11       Impact factor: 3.035

10.  Two novel WD40 domain-containing proteins, Ere1 and Ere2, function in the retromer-mediated endosomal recycling pathway.

Authors:  Yufeng Shi; Christopher J Stefan; Sarah M Rue; David Teis; Scott D Emr
Journal:  Mol Biol Cell       Date:  2011-08-31       Impact factor: 4.138

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  21 in total

1.  Noncanonical Radical SAM Enzyme Chemistry Learned from Diphthamide Biosynthesis.

Authors:  Min Dong; Yugang Zhang; Hening Lin
Journal:  Biochemistry       Date:  2018-05-10       Impact factor: 3.162

2.  The asymmetric function of Dph1-Dph2 heterodimer in diphthamide biosynthesis.

Authors:  Min Dong; Emily E Dando; Ilana Kotliar; Xiaoyang Su; Boris Dzikovski; Jack H Freed; Hening Lin
Journal:  J Biol Inorg Chem       Date:  2019-08-28       Impact factor: 3.358

3.  Chemogenomic approach identified yeast YLR143W as diphthamide synthetase.

Authors:  Xiaoyang Su; Zhewang Lin; Wei Chen; Hong Jiang; Sheng Zhang; Hening Lin
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-19       Impact factor: 11.205

4.  Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.

Authors:  Min Dong; Venkatesan Kathiresan; Michael K Fenwick; Andrew T Torelli; Yang Zhang; Jonathan D Caranto; Boris Dzikovski; Ajay Sharma; Kyle M Lancaster; Jack H Freed; Steven E Ealick; Brian M Hoffman; Hening Lin
Journal:  Science       Date:  2018-03-16       Impact factor: 47.728

5.  A modified form of diphthamide causes immunotoxin resistance in a lymphoma cell line with a deletion of the WDR85 gene.

Authors:  Hui Wei; Tapan K Bera; Alan S Wayne; Laiman Xiang; Simona Colantonio; Oleg Chertov; Ira Pastan
Journal:  J Biol Chem       Date:  2013-03-13       Impact factor: 5.157

Review 6.  Evolution of the archaeal and mammalian information processing systems: towards an archaeal model for human disease.

Authors:  Zhe Lyu; William B Whitman
Journal:  Cell Mol Life Sci       Date:  2016-06-03       Impact factor: 9.261

7.  Diphthamide modification on eukaryotic elongation factor 2 is needed to assure fidelity of mRNA translation and mouse development.

Authors:  Shihui Liu; Christopher Bachran; Pradeep Gupta; Sharmina Miller-Randolph; Hailun Wang; Devorah Crown; Yi Zhang; Alexander N Wein; Rajat Singh; Rasem Fattah; Stephen H Leppla
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-06       Impact factor: 11.205

8.  Discovery and Functional Characterization of a Yeast Sugar Alcohol Phosphatase.

Authors:  Yi-Fan Xu; Wenyun Lu; Jonathan C Chen; Sarah A Johnson; Patrick A Gibney; David G Thomas; Greg Brown; Amanda L May; Shawn R Campagna; Alexander F Yakunin; David Botstein; Joshua D Rabinowitz
Journal:  ACS Chem Biol       Date:  2018-10-04       Impact factor: 5.100

9.  Dph3 Enables Aerobic Diphthamide Biosynthesis by Donating One Iron Atom to Transform a [3Fe-4S] to a [4Fe-4S] Cluster in Dph1-Dph2.

Authors:  Yugang Zhang; Dan Su; Boris Dzikovski; Sean H Majer; Rachael Coleman; Siddarth Chandrasekaran; Michael K Fenwick; Brian R Crane; Kyle M Lancaster; Jack H Freed; Hening Lin
Journal:  J Am Chem Soc       Date:  2021-06-21       Impact factor: 15.419

10.  The amidation step of diphthamide biosynthesis in yeast requires DPH6, a gene identified through mining the DPH1-DPH5 interaction network.

Authors:  Shanow Uthman; Christian Bär; Viktor Scheidt; Shihui Liu; Sara ten Have; Flaviano Giorgini; Michael J R Stark; Raffael Schaffrath
Journal:  PLoS Genet       Date:  2013-02-28       Impact factor: 5.917

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