Literature DB >> 22181446

Reconstruction of physiological instructions from Zebra finch song.

Yonatan Sanz Perl1, Ezequiel M Arneodo, Ana Amador, Franz Goller, Gabriel B Mindlin.   

Abstract

We reconstruct the physiological parameters that control an avian vocal organ during birdsong production using recorded song. The procedure involves fitting the time dependent parameters of an avian vocal organ model. Computationally, the model is implemented as a dynamical system ruling the behavior of the oscillating labia that modulate the air flow during sound production, together with the equations describing the dynamics of pressure fluctuations in the vocal tract. We tested our procedure for Zebra finch song with, simultaneously recorded physiological parameters: air sac pressure and the electromyographic activity of the left and right ventral syringeal muscles. A comparison of the reconstructed instructions with measured physiological parameters during song shows a high degree of correlation. Integrating the model with reconstructed parameters leads to the synthesis of highly realistic songs.

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Mesh:

Year:  2011        PMID: 22181446      PMCID: PMC3909473          DOI: 10.1103/PhysRevE.84.051909

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  22 in total

1.  Temporal precision and temporal drift in brain and behavior of zebra finch song.

Authors:  Z Chi; D Margoliash
Journal:  Neuron       Date:  2001-12-06       Impact factor: 17.173

Review 2.  Motor control of birdsong.

Authors:  Roderick A Suthers; Daniel Margoliash
Journal:  Curr Opin Neurobiol       Date:  2002-12       Impact factor: 6.627

3.  Modeling source-source and source-filter acoustic interaction in birdsong.

Authors:  Rodrigo Laje; Gabriel B Mindlin
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-09-27

4.  Role of syringeal muscles in controlling the phonology of bird song.

Authors:  F Goller; R A Suthers
Journal:  J Neurophysiol       Date:  1996-07       Impact factor: 2.714

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Authors:  F Goller; O N Larsen
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-23       Impact factor: 11.205

Review 6.  The brain has a body: adaptive behavior emerges from interactions of nervous system, body and environment.

Authors:  H J Chiel; R D Beer
Journal:  Trends Neurosci       Date:  1997-12       Impact factor: 13.837

7.  Acoustic signatures of sound source-tract coupling.

Authors:  Ezequiel M Arneodo; Yonatan Sanz Perl; Gabriel B Mindlin
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-04-25

8.  Freedom and rules: the acquisition and reprogramming of a bird's learned song.

Authors:  Timothy J Gardner; Felix Naef; Fernando Nottebohm
Journal:  Science       Date:  2005-05-13       Impact factor: 47.728

9.  Vocal tract articulation in zebra finches.

Authors:  Verena R Ohms; Peter Ch Snelderwaard; Carel Ten Cate; Gabriël J L Beckers
Journal:  PLoS One       Date:  2010-07-30       Impact factor: 3.240

10.  Vocal tract motor patterns and resonance during constant frequency song: the white-throated sparrow.

Authors:  Tobias Riede; Roderick A Suthers
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2008-12-10       Impact factor: 1.836

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  18 in total

1.  Automatic reconstruction of physiological gestures used in a model of birdsong production.

Authors:  Santiago Boari; Yonatan Sanz Perl; Ana Amador; Daniel Margoliash; Gabriel B Mindlin
Journal:  J Neurophysiol       Date:  2015-09-16       Impact factor: 2.714

2.  A mechanism for frequency modulation in songbirds shared with humans.

Authors:  Ana Amador; Daniel Margoliash
Journal:  J Neurosci       Date:  2013-07-03       Impact factor: 6.167

3.  Gating related activity in a syringeal muscle allows the reconstruction of zebra finches songs.

Authors:  Juan F Döppler; Alan Bush; Ana Amador; Franz Goller; Gabriel B Mindlin
Journal:  Chaos       Date:  2018-07       Impact factor: 3.642

4.  Vocal development in a Waddington landscape.

Authors:  Yayoi Teramoto; Daniel Y Takahashi; Philip Holmes; Asif A Ghazanfar
Journal:  Elife       Date:  2017-01-16       Impact factor: 8.140

5.  Controllable biomimetic birdsong.

Authors:  Aryesh Mukherjee; Shreyas Mandre; L Mahadevan
Journal:  J R Soc Interface       Date:  2017-08       Impact factor: 4.118

6.  Nonlinear dynamics in the study of birdsong.

Authors:  Gabriel B Mindlin
Journal:  Chaos       Date:  2017-09       Impact factor: 3.642

7.  Neural coding of sound envelope structure in songbirds.

Authors:  Santiago Boari; Ana Amador
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2017-12-12       Impact factor: 1.836

8.  From perception to action in songbird production: dynamics of a whole loop.

Authors:  Ana Amador; Santiago Boari; Gabriel B Mindlin
Journal:  Curr Opin Syst Biol       Date:  2017-04-01

9.  Population-Level Representation of a Temporal Sequence Underlying Song Production in the Zebra Finch.

Authors:  Michel A Picardo; Josh Merel; Kalman A Katlowitz; Daniela Vallentin; Daniel E Okobi; Sam E Benezra; Rachel C Clary; Eftychios A Pnevmatikakis; Liam Paninski; Michael A Long
Journal:  Neuron       Date:  2016-05-18       Impact factor: 17.173

10.  Finding, visualizing, and quantifying latent structure across diverse animal vocal repertoires.

Authors:  Tim Sainburg; Marvin Thielk; Timothy Q Gentner
Journal:  PLoS Comput Biol       Date:  2020-10-15       Impact factor: 4.475

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