Literature DB >> 22172345

A view of the chromatin landscape.

Lindsy M Rapkin1, David R P Anchel, Ren Li, David P Bazett-Jones.   

Abstract

The microscope has been indispensable to the last century of chromatin structure research. Microscopy techniques have revealed that the three-dimensional location of chromatin is not random but represents a further manifestation of a highly compartmentalized cell nucleus. Moreover, the structure and location of genetic loci display cell type-specific differences and relate directly to the state of differentiation. Advances to bridge imaging with genetic, molecular and biochemical approaches have greatly enhanced our understanding of the interdependence of chromatin structure and nuclear function in mammalian cells. In this review we discuss the current state of chromatin structure research in relationship to the variety of microscopy techniques that have contributed to this field.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22172345     DOI: 10.1016/j.micron.2011.11.007

Source DB:  PubMed          Journal:  Micron        ISSN: 0968-4328            Impact factor:   2.251


  18 in total

Review 1.  A genome-wide 3C-method for characterizing the three-dimensional architectures of genomes.

Authors:  Zhijun Duan; Mirela Andronescu; Kevin Schutz; Choli Lee; Jay Shendure; Stanley Fields; William S Noble; C Anthony Blau
Journal:  Methods       Date:  2012-07-06       Impact factor: 3.608

2.  The genome in space and time: does form always follow function? How does the spatial and temporal organization of a eukaryotic genome reflect and influence its functions?

Authors:  Zhijun Duan; Carl Anthony Blau
Journal:  Bioessays       Date:  2012-07-06       Impact factor: 4.345

3.  Single-cell Hi-C for genome-wide detection of chromatin interactions that occur simultaneously in a single cell.

Authors:  Takashi Nagano; Yaniv Lubling; Eitan Yaffe; Steven W Wingett; Wendy Dean; Amos Tanay; Peter Fraser
Journal:  Nat Protoc       Date:  2015-11-05       Impact factor: 13.491

Review 4.  Coming to terms with chromatin structure.

Authors:  Liron Even-Faitelson; Vahideh Hassan-Zadeh; Zahra Baghestani; David P Bazett-Jones
Journal:  Chromosoma       Date:  2015-07-30       Impact factor: 4.316

Review 5.  Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data.

Authors:  Job Dekker; Marc A Marti-Renom; Leonid A Mirny
Journal:  Nat Rev Genet       Date:  2013-05-09       Impact factor: 53.242

6.  Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres.

Authors:  Eden Fussner; Mike Strauss; Ugljesa Djuric; Ren Li; Kashif Ahmed; Michael Hart; James Ellis; David P Bazett-Jones
Journal:  EMBO Rep       Date:  2012-11-06       Impact factor: 8.807

7.  Spatial Organization of Epigenomes.

Authors:  Jonathan Christopher Dubé; Xue Qing David Wang; Josée Dostie
Journal:  Curr Mol Biol Rep       Date:  2016-02-04

Review 8.  Chromosome domain architecture and dynamic organization of the fission yeast genome.

Authors:  Takeshi Mizuguchi; Jemima Barrowman; Shiv I S Grewal
Journal:  FEBS Lett       Date:  2015-06-19       Impact factor: 4.124

9.  Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains.

Authors:  Daniel Jost; Pascal Carrivain; Giacomo Cavalli; Cédric Vaillant
Journal:  Nucleic Acids Res       Date:  2014-08-04       Impact factor: 16.971

10.  The histone chaperone DAXX maintains the structural organization of heterochromatin domains.

Authors:  Lindsy M Rapkin; Kashif Ahmed; Stanimir Dulev; Ren Li; Hiroshi Kimura; Alexander M Ishov; David P Bazett-Jones
Journal:  Epigenetics Chromatin       Date:  2015-10-21       Impact factor: 4.954

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.