Literature DB >> 22168561

Accelerated multiplicative updates and hierarchical ALS algorithms for nonnegative matrix factorization.

Nicolas Gillis1, François Glineur.   

Abstract

Nonnegative matrix factorization (NMF) is a data analysis technique used in a great variety of applications such as text mining, image processing, hyperspectral data analysis, computational biology, and clustering. In this letter, we consider two well-known algorithms designed to solve NMF problems: the multiplicative updates of Lee and Seung and the hierarchical alternating least squares of Cichocki et al. We propose a simple way to significantly accelerate these schemes, based on a careful analysis of the computational cost needed at each iteration, while preserving their convergence properties. This acceleration technique can also be applied to other algorithms, which we illustrate on the projected gradient method of Lin. The efficiency of the accelerated algorithms is empirically demonstrated on image and text data sets and compares favorably with a state-of-the-art alternating nonnegative least squares algorithm.

Mesh:

Year:  2011        PMID: 22168561     DOI: 10.1162/NECO_a_00256

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  8 in total

1.  Inferring Population Structure and Admixture Proportions in Low-Depth NGS Data.

Authors:  Jonas Meisner; Anders Albrechtsen
Journal:  Genetics       Date:  2018-08-21       Impact factor: 4.562

2.  A unified statistical approach to non-negative matrix factorization and probabilistic latent semantic indexing.

Authors:  Karthik Devarajan; Guoli Wang; Nader Ebrahimi
Journal:  Mach Learn       Date:  2015-04-01       Impact factor: 2.940

3.  A Quasi-Likelihood Approach to Nonnegative Matrix Factorization.

Authors:  Karthik Devarajan; Vincent C K Cheung
Journal:  Neural Comput       Date:  2016-06-27       Impact factor: 2.026

4.  Comparison of unsupervised classification methods for brain tumor segmentation using multi-parametric MRI.

Authors:  N Sauwen; M Acou; S Van Cauter; D M Sima; J Veraart; F Maes; U Himmelreich; E Achten; S Van Huffel
Journal:  Neuroimage Clin       Date:  2016-09-30       Impact factor: 4.881

5.  The successive projection algorithm as an initialization method for brain tumor segmentation using non-negative matrix factorization.

Authors:  Nicolas Sauwen; Marjan Acou; Halandur N Bharath; Diana M Sima; Jelle Veraart; Frederik Maes; Uwe Himmelreich; Eric Achten; Sabine Van Huffel
Journal:  PLoS One       Date:  2017-08-28       Impact factor: 3.240

6.  Fast optimization of non-negative matrix tri-factorization.

Authors:  Andrej Čopar; Blaž Zupan; Marinka Zitnik
Journal:  PLoS One       Date:  2019-06-11       Impact factor: 3.240

7.  Two-hierarchical nonnegative matrix factorization distinguishing the fluorescent targets from autofluorescence for fluorescence imaging.

Authors:  Shaosen Huang; Yong Zhao; Binjie Qin
Journal:  Biomed Eng Online       Date:  2015-12-15       Impact factor: 2.819

8.  A Network-Based Drug Repurposing Method Via Non-Negative Matrix Factorization.

Authors:  Shagahyegh Sadeghi; Jianguo Lu; Alioune Ngom
Journal:  Bioinformatics       Date:  2021-12-07       Impact factor: 6.937

  8 in total

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