Literature DB >> 27348511

A Quasi-Likelihood Approach to Nonnegative Matrix Factorization.

Karthik Devarajan1, Vincent C K Cheung2.   

Abstract

A unified approach to nonnegative matrix factorization based on the theory of generalized linear models is proposed. This approach embeds a variety of statistical models, including the exponential family, within a single theoretical framework and provides a unified view of such factorizations from the perspective of quasi-likelihood. Using this framework, a family of algorithms for handling signal-dependent noise is developed and its convergence proved using the expectation-maximization algorithm. In addition, a measure to evaluate the goodness of fit of the resulting factorization is described. The proposed methods allow modeling of nonlinear effects using appropriate link functions and are illustrated using an application in biomedical signal processing.

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Year:  2016        PMID: 27348511      PMCID: PMC5549860          DOI: 10.1162/NECO_a_00853

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  38 in total

1.  Learning the parts of objects by non-negative matrix factorization.

Authors:  D D Lee; H S Seung
Journal:  Nature       Date:  1999-10-21       Impact factor: 49.962

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Authors:  Matthew C Tresch; Philippe Saltiel; Andrea d'Avella; Emilio Bizzi
Journal:  Brain Res Brain Res Rev       Date:  2002-10

3.  Matrix factorization algorithms for the identification of muscle synergies: evaluation on simulated and experimental data sets.

Authors:  Matthew C Tresch; Vincent C K Cheung; Andrea d'Avella
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4.  Non-negative matrix factorization algorithms modeling noise distributions within the exponential family.

Authors:  Vincent C K Cheung; Matthew C Tresch
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2005

5.  Activity of Renshaw cells during locomotor-like rhythmic activity in the isolated spinal cord of neonatal mice.

Authors:  Hiroshi Nishimaru; Carlos E Restrepo; Ole Kiehn
Journal:  J Neurosci       Date:  2006-05-17       Impact factor: 6.167

Review 6.  Motor primitives--new data and future questions.

Authors:  Simon F Giszter
Journal:  Curr Opin Neurobiol       Date:  2015-04-22       Impact factor: 6.627

7.  Microstimulation activates a handful of muscle synergies.

Authors:  Simon A Overduin; Andrea d'Avella; Jose M Carmena; Emilio Bizzi
Journal:  Neuron       Date:  2012-12-20       Impact factor: 17.173

8.  Limited-memory fast gradient descent method for graph regularized nonnegative matrix factorization.

Authors:  Naiyang Guan; Lei Wei; Zhigang Luo; Dacheng Tao
Journal:  PLoS One       Date:  2013-10-21       Impact factor: 3.240

9.  The neural origin of muscle synergies.

Authors:  Emilio Bizzi; Vincent C K Cheung
Journal:  Front Comput Neurosci       Date:  2013-04-29       Impact factor: 2.380

Review 10.  Nonnegative matrix factorization: an analytical and interpretive tool in computational biology.

Authors:  Karthik Devarajan
Journal:  PLoS Comput Biol       Date:  2008-07-25       Impact factor: 4.475

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  2 in total

1.  An Optogenetic Demonstration of Motor Modularity in the Mammalian Spinal Cord.

Authors:  Vittorio Caggiano; Vincent C K Cheung; Emilio Bizzi
Journal:  Sci Rep       Date:  2016-10-13       Impact factor: 4.379

2.  Modulating the Structure of Motor Variability for Skill Learning Through Specific Muscle Synergies in Elderlies and Young Adults.

Authors:  Vincent C K Cheung; Xiao-Chang Zheng; Roy T H Cheung; Rosa H M Chan
Journal:  IEEE Open J Eng Med Biol       Date:  2020-02-14
  2 in total

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