Literature DB >> 22162179

The nucleocytoplasmic conflict, a driving force for the emergence of plant organellar RNA editing.

Benoît Castandet1, Alejandro Araya.   

Abstract

RNA editing challenges the central dogma of molecular biology by changing the genetic information at the transcript level. In plant organelles, RNAs are modified by deamination of some specific cytosine residues, but the origin of this process remains puzzling. Different from the generally accepted neutral model to explain the emergence of RNA editing in plant organelles, we propose a new hypothesis based on the nucleocytoplasmic conflict theory. We assume that mutations in organellar genomes arose first and spread into the population provided they increased the transmission of their own maternally inherited genome. RNA editing appeared subsequently as a nuclear-encoded correction mechanism to restore the transmission of the nuclear genome. In plants, a well-known consequence of the nucleocytoplasmic conflict is cytoplasmic male sterility (CMS) which is counteracted by the emergence of fertility restorer genes (Rf) belonging to the pentatricopeptide repeat (PPR) protein family. Interestingly, RNA-editing deficiency can lead to CMS, and it now clearly appears that PPR proteins are major players in RNA editing. This striking similarity between the mechanisms of fertility restoration and RNA editing can be explained if both reactions are the consequence of the same driving force, the nucleocytoplasmic conflict. Similarly, the prevalence of RNA editing in eukaryotic organellar genomes could also be a consequence of the genetic antagonism between organellar and nuclear genomes.
Copyright © 2011 Wiley Periodicals, Inc.

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Year:  2011        PMID: 22162179     DOI: 10.1002/iub.581

Source DB:  PubMed          Journal:  IUBMB Life        ISSN: 1521-6543            Impact factor:   3.885


  9 in total

Review 1.  Current understanding of male sterility systems in vegetable Brassicas and their exploitation in hybrid breeding.

Authors:  Saurabh Singh; S S Dey; Reeta Bhatia; Raj Kumar; T K Behera
Journal:  Plant Reprod       Date:  2019-05-03       Impact factor: 3.767

2.  A mitochondrial DNA hypomorph of cytochrome oxidase specifically impairs male fertility in Drosophila melanogaster.

Authors:  Maulik R Patel; Ganesh K Miriyala; Aimee J Littleton; Heiko Yang; Kien Trinh; Janet M Young; Scott R Kennedy; Yukiko M Yamashita; Leo J Pallanck; Harmit S Malik
Journal:  Elife       Date:  2016-08-02       Impact factor: 8.140

3.  A super PPR cluster for restoring fertility revealed by genetic mapping, homocap-seq and de novo assembly in cotton.

Authors:  Bin Gao; Gaofeng Ren; Tianwang Wen; Haiping Li; Xianlong Zhang; Zhongxu Lin
Journal:  Theor Appl Genet       Date:  2021-11-22       Impact factor: 5.699

4.  Yeast PPR proteins, watchdogs of mitochondrial gene expression.

Authors:  Christopher J Herbert; Pawel Golik; Nathalie Bonnefoy
Journal:  RNA Biol       Date:  2013-06-18       Impact factor: 4.652

5.  Towards a comprehensive picture of C-to-U RNA editing sites in angiosperm mitochondria.

Authors:  Alejandro A Edera; Carolina L Gandini; M Virginia Sanchez-Puerta
Journal:  Plant Mol Biol       Date:  2018-05-14       Impact factor: 4.076

Review 6.  RNA editing and drug discovery for cancer therapy.

Authors:  Wei-Hsuan Huang; Chao-Neng Tseng; Jen-Yang Tang; Cheng-Hong Yang; Shih-Shin Liang; Hsueh-Wei Chang
Journal:  ScientificWorldJournal       Date:  2013-04-24

7.  Pentatricopeptide repeat proteins involved in plant organellar RNA editing.

Authors:  Yusuke Yagi; Makoto Tachikawa; Hisayo Noguchi; Soichirou Satoh; Junichi Obokata; Takahiro Nakamura
Journal:  RNA Biol       Date:  2013-05-03       Impact factor: 4.652

8.  Organelle Genome Inheritance in Deparia Ferns (Athyriaceae, Aspleniineae, Polypodiales).

Authors:  Li-Yaung Kuo; Te-Yen Tang; Fay-Wei Li; Huei-Jiun Su; Wen-Liang Chiou; Yao-Moan Huang; Chun-Neng Wang
Journal:  Front Plant Sci       Date:  2018-04-13       Impact factor: 5.753

9.  Identification of clustered organellar short (cos) RNAs and of a conserved family of organellar RNA-binding proteins, the heptatricopeptide repeat proteins, in the malaria parasite.

Authors:  Arne Hillebrand; Joachim M Matz; Martin Almendinger; Katja Müller; Kai Matuschewski; Christian Schmitz-Linneweber
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

  9 in total

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