Literature DB >> 22162071

Cell-free synthesis of membrane subunits of ATP synthase in phospholipid bicelles: NMR shows subunit a fold similar to the protein in the cell membrane.

Eva-Maria E Uhlemann1, Hannah E Pierson, Robert H Fillingame, Oleg Y Dmitriev.   

Abstract

NMR structure determination of large membrane proteins is hampered by broad spectral lines, overlap, and ambiguity of signal assignment. Chemical shift and NOE assignment can be facilitated by amino acid selective isotope labeling in cell-free protein synthesis system. However, many biological detergents are incompatible with the cell-free synthesis, and membrane proteins often have to be synthesized in an insoluble form. We report cell-free synthesis of subunits a and c of the proton channel of Escherichia coli ATP synthase in a soluble form in a mixture of phosphatidylcholine derivatives. In comparison, subunit a was purified from the cell-free system and from the bacterial cell membranes. NMR spectra of both preparations were similar, indicating that our procedure for cell-free synthesis produces protein structurally similar to that prepared from the cell membranes.
Copyright © 2011 The Protein Society.

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Year:  2012        PMID: 22162071      PMCID: PMC3324772          DOI: 10.1002/pro.2014

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  57 in total

1.  Transmembrane topography of subunit a in the Escherichia coli F1F0 ATP synthase.

Authors:  F I Valiyaveetil; R H Fillingame
Journal:  J Biol Chem       Date:  1998-06-26       Impact factor: 5.157

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Authors:  E Schneider; K Altendorf
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

3.  Reconstitution of the Fo complex of Escherichia coli ATP synthase from isolated subunits. Varying the number of essential carboxylates by co-incorporation of wild-type and mutant subunit c after purification in organic solvent.

Authors:  O Y Dmitriev; K Altendorf; R H Fillingame
Journal:  Eur J Biochem       Date:  1995-10-15

4.  A robust and cost-effective method for the production of Val, Leu, Ile (delta 1) methyl-protonated 15N-, 13C-, 2H-labeled proteins.

Authors:  N K Goto; K H Gardner; G A Mueller; R C Willis; L E Kay
Journal:  J Biomol NMR       Date:  1999-04       Impact factor: 2.835

5.  Structure of the rotor ring of F-Type Na+-ATPase from Ilyobacter tartaricus.

Authors:  Thomas Meier; Patrick Polzer; Kay Diederichs; Wolfram Welte; Peter Dimroth
Journal:  Science       Date:  2005-04-29       Impact factor: 47.728

6.  Structure of the membrane domain of subunit b of the Escherichia coli F0F1 ATP synthase.

Authors:  O Dmitriev; P C Jones; W Jiang; R H Fillingame
Journal:  J Biol Chem       Date:  1999-05-28       Impact factor: 5.157

Review 7.  Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels.

Authors:  B Miroux; J E Walker
Journal:  J Mol Biol       Date:  1996-07-19       Impact factor: 5.469

8.  "Bicellar" lipid mixtures as used in biochemical and biophysical studies.

Authors:  John Katsaras; Thad A Harroun; Jeremy Pencer; Mu-Ping Nieh
Journal:  Naturwissenschaften       Date:  2005-08

9.  The specific incorporation of labelled aromatic amino acids into proteins through growth of bacteria in the presence of glyphosate. Application to fluorotryptophan labelling to the H(+)-ATPase of Escherichia coli and NMR studies.

Authors:  H W Kim; J A Perez; S J Ferguson; I D Campbell
Journal:  FEBS Lett       Date:  1990-10-15       Impact factor: 4.124

10.  Efficient production of isotopically labeled proteins by cell-free synthesis: a practical protocol.

Authors:  Takuya Torizawa; Masato Shimizu; Masato Taoka; Hiroshi Miyano; Masatsune Kainosho
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

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  9 in total

1.  Reconstitution of Mitochondrial Membrane Proteins into Nanodiscs by Cell-Free Expression.

Authors:  Ketan Malhotra; Nathan N Alder
Journal:  Methods Mol Biol       Date:  2017

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Journal:  J Bacteriol       Date:  2013-07-08       Impact factor: 3.490

3.  Cell-free expression and in meso crystallisation of an integral membrane kinase for structure determination.

Authors:  Coilín Boland; Dianfan Li; Syed Tasadaque Ali Shah; Stefan Haberstock; Volker Dötsch; Frank Bernhard; Martin Caffrey
Journal:  Cell Mol Life Sci       Date:  2014-07-11       Impact factor: 9.261

Review 4.  When detergent meets bilayer: birth and coming of age of lipid bicelles.

Authors:  Ulrich H N Dürr; Ronald Soong; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-01-23       Impact factor: 9.795

5.  Engineered Protein Model of the ATP synthase H+- Channel Shows No Salt Bridge at the Rotor-Stator Interface.

Authors:  Hannah E Pierson; Mandeep Kaler; Christopher O'Grady; Eva-Maria E Uhlemann; Oleg Y Dmitriev
Journal:  Sci Rep       Date:  2018-07-27       Impact factor: 4.379

6.  Yeast knockout library allows for efficient testing of genomic mutations for cell-free protein synthesis.

Authors:  Jennifer A Schoborg; Lauren G Clark; Alaksh Choudhury; C Eric Hodgman; Michael C Jewett
Journal:  Synth Syst Biotechnol       Date:  2016-04-06

Review 7.  Escherichia coli Extract-Based Cell-Free Expression System as an Alternative for Difficult-to-Obtain Protein Biosynthesis.

Authors:  Sviatlana Smolskaya; Yulia A Logashina; Yaroslav A Andreev
Journal:  Int J Mol Sci       Date:  2020-01-31       Impact factor: 5.923

Review 8.  The magic of bicelles lights up membrane protein structure.

Authors:  Ulrich H N Dürr; Melissa Gildenberg; Ayyalusamy Ramamoorthy
Journal:  Chem Rev       Date:  2012-08-24       Impact factor: 60.622

9.  Cell-free methods to produce structurally intact mammalian membrane proteins.

Authors:  Takehiro Shinoda; Naoko Shinya; Kaori Ito; Yoshiko Ishizuka-Katsura; Noboru Ohsawa; Takaho Terada; Kunio Hirata; Yoshiaki Kawano; Masaki Yamamoto; Taisuke Tomita; Yohei Ishibashi; Yoshio Hirabayashi; Tomomi Kimura-Someya; Mikako Shirouzu; Shigeyuki Yokoyama
Journal:  Sci Rep       Date:  2016-07-28       Impact factor: 4.379

  9 in total

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