Literature DB >> 22160571

Inositol phosphate kinase Vip1p interacts with histone chaperone Asf1p in Saccharomyces cerevisiae.

Shigehiro Osada1, Kiyoto Kageyama, Yuji Ohnishi, Jun-Ichi Nishikawa, Tsutomu Nishihara, Masayoshi Imagawa.   

Abstract

Histone eviction and deposition are critical steps in many nuclear processes. The histone H3/H4 chaperone Asf1p is highly conserved and is involved in DNA replication, DNA repair, and transcription. To identify the factors concerned with anti-silencing function 1 (ASF1), we purified Asf1p-associated factors from the yeast Saccharomyces cerevisiae by a GST pull-down experiment, and mass spectrometry analysis was performed. Several factors are specifically associated with Asf1p, including Vip1p. VIP1 is conserved from yeast to humans and encodes inositol hexakisphoshate and inositol heptakisphosphate kinase. Vip1p interacted with Asf1p as a dimer or in a complex with another protein(s). Deletion of VIP1 did not affect the interaction between Asf1p and other Asf1p-associated factors. An in vitro GST pull-down assay indicated a direct interaction between Asf1p and Vip1p, and the interaction between the two factors in vivo was detected by an immunoprecipitation experiment. Furthermore, genetic experiments revealed that VIP1 disruption increased sensitivity to 6-azauracil (6-AU), but not to DNA-damaging reagents in wild-type and ASF1-deleted strains. It is thought that 6-AU decreases nucleotide levels and reduces transcription elongation. These observations suggest that the association of Asf1p and Vip1p may be implicated in transcription elongation.

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Year:  2011        PMID: 22160571     DOI: 10.1007/s11033-011-1295-z

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  35 in total

1.  Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis.

Authors:  J Recht; T Tsubota; J C Tanny; R L Diaz; J M Berger; X Zhang; B A Garcia; J Shabanowitz; A L Burlingame; D F Hunt; P D Kaufman; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-20       Impact factor: 11.205

2.  Histone chaperones regulate histone exchange during transcription.

Authors:  Hye-Jin Kim; Ja-Hwan Seol; Jeung-Whan Han; Hong-Duk Youn; Eun-Jung Cho
Journal:  EMBO J       Date:  2007-10-04       Impact factor: 11.598

3.  Characterization of the yeast trimeric-SAS acetyltransferase complex.

Authors:  Wei-Jong Shia; Shigehiro Osada; Laurence Florens; Selene K Swanson; Michael P Washburn; Jerry L Workman
Journal:  J Biol Chem       Date:  2005-01-18       Impact factor: 5.157

Review 4.  Regulation of nuclear processes by inositol polyphosphates.

Authors:  John D York
Journal:  Biochim Biophys Acta       Date:  2006-05-13

5.  The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins.

Authors:  G Orphanides; W H Wu; W S Lane; M Hampsey; D Reinberg
Journal:  Nature       Date:  1999-07-15       Impact factor: 49.962

6.  DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs.

Authors:  T Wada; T Takagi; Y Yamaguchi; A Ferdous; T Imai; S Hirose; S Sugimoto; K Yano; G A Hartzog; F Winston; S Buratowski; H Handa
Journal:  Genes Dev       Date:  1998-02-01       Impact factor: 11.361

Review 7.  Inositol pyrophosphate pyrotechnics.

Authors:  Rashna Bhandari; Anutosh Chakraborty; Solomon H Snyder
Journal:  Cell Metab       Date:  2007-05       Impact factor: 27.287

8.  Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins.

Authors:  D L Lindstrom; S L Squazzo; N Muster; T A Burckin; K C Wachter; C A Emigh; J A McCleery; J R Yates; G A Hartzog
Journal:  Mol Cell Biol       Date:  2003-02       Impact factor: 4.272

Review 9.  Inositol pyrophosphates: metabolism and signaling.

Authors:  M Bennett; S M N Onnebo; C Azevedo; A Saiardi
Journal:  Cell Mol Life Sci       Date:  2006-03       Impact factor: 9.261

10.  Chromatin assembly factor Asf1p-dependent occupancy of the SAS histone acetyltransferase complex at the silent mating-type locus HMLalpha.

Authors:  Shigehiro Osada; Mitsumasa Kurita; Jun-ichi Nishikawa; Tsutomu Nishihara
Journal:  Nucleic Acids Res       Date:  2005-05-12       Impact factor: 16.971

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  2 in total

1.  Arabidopsis PFA-DSP-Type Phosphohydrolases Target Specific Inositol Pyrophosphate Messengers.

Authors:  Philipp Gaugler; Robin Schneider; Guizhen Liu; Danye Qiu; Jonathan Weber; Jochen Schmid; Nikolaus Jork; Markus Häner; Kevin Ritter; Nicolás Fernández-Rebollo; Ricardo F H Giehl; Minh Nguyen Trung; Ranjana Yadav; Dorothea Fiedler; Verena Gaugler; Henning J Jessen; Gabriel Schaaf; Debabrata Laha
Journal:  Biochemistry       Date:  2022-05-31       Impact factor: 3.321

2.  VIH2 Regulates the Synthesis of Inositol Pyrophosphate InsP8 and Jasmonate-Dependent Defenses in Arabidopsis.

Authors:  Debabrata Laha; Philipp Johnen; Cristina Azevedo; Marek Dynowski; Michael Weiß; Samanta Capolicchio; Haibin Mao; Tim Iven; Merel Steenbergen; Marc Freyer; Philipp Gaugler; Marília K F de Campos; Ning Zheng; Ivo Feussner; Henning J Jessen; Saskia C M Van Wees; Adolfo Saiardi; Gabriel Schaaf
Journal:  Plant Cell       Date:  2015-04-21       Impact factor: 11.277

  2 in total

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