Literature DB >> 22155579

Detection of enterovirus 71 using reverse transcription loop-mediated isothermal amplification (RT-LAMP).

Xiang Wang1, Jun-ping Zhu, Qian Zhang, Zi-gang Xu, Fang Zhang, Zhi-hui Zhao, Wen-zhi Zheng, Li-shu Zheng.   

Abstract

Reverse transcription loop-mediated isothermal amplification (RT-LAMP), which is a visual assay for nucleic acids, is performed in a single step using one tube at 65 °C for 1.5 h. In this study, RT-LAMP was established as a method for the detection of enterovirus 71 (EV71). The detection limit of the assay was approximately 10 copies, and no cross-reactivity was noted with Coxsackievirus A16, echovirus, human rotavirus (HRV) or norovirus. This assay, which offers greater sensitivity at a lower cost compared with the conventional reverse transcription polymerase chain reaction (RT-PCR), was validated using 252 clinical specimens that had been confirmed by laboratory diagnosis using RT-PCR. Both methods produced the same results with 52 positive samples. The RT-LAMP-based assay does not require specialised equipment, and therefore, it can be performed conveniently during an outbreak or under field conditions. In brief, the RT-LAMP-based assay provided a simple, rapid and efficient method for the detection of EV71 nucleic acid under field conditions.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22155579     DOI: 10.1016/j.jviromet.2011.11.019

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  11 in total

1.  Nuclear Protein Sam68 Interacts with the Enterovirus 71 Internal Ribosome Entry Site and Positively Regulates Viral Protein Translation.

Authors:  Hua Zhang; Lei Song; Haolong Cong; Po Tien
Journal:  J Virol       Date:  2015-07-22       Impact factor: 5.103

Review 2.  Coxsackievirus A16: epidemiology, diagnosis, and vaccine.

Authors:  Qunying Mao; Yiping Wang; Xin Yao; Lianlian Bian; Xing Wu; Miao Xu; Zhenglun Liang
Journal:  Hum Vaccin Immunother       Date:  2013-11-14       Impact factor: 3.452

3.  Development of Loop-Mediated Isothermal Amplification (LAMP) for Universal Detection of Enteroviruses.

Authors:  Hua-Bing Zhao; Guang-Ya Yin; Guo-Ping Zhao; Ai-Hua Huang; Jun-Hong Wang; Shuang-Feng Yang; Hong-Sheng Gao; Wei-Jun Kang
Journal:  Indian J Microbiol       Date:  2013-04-02       Impact factor: 2.461

4.  Improved detection limit in rapid detection of human enterovirus 71 and coxsackievirus A16 by a novel reverse transcription-isothermal multiple-self-matching-initiated amplification assay.

Authors:  Xiong Ding; Kai Nie; Lei Shi; Yong Zhang; Li Guan; Dan Zhang; Shunxiang Qi; Xuejun Ma
Journal:  J Clin Microbiol       Date:  2014-03-19       Impact factor: 5.948

5.  Enhancement of Polymerase Activity of the Large Fragment in DNA Polymerase I from Geobacillus stearothermophilus by Site-Directed Mutagenesis at the Active Site.

Authors:  Yi Ma; Beilei Zhang; Meng Wang; Yanghui Ou; Jufang Wang; Shan Li
Journal:  Biomed Res Int       Date:  2016-11-17       Impact factor: 3.411

6.  Multiplex Reverse-Transcription Loop-Mediated Isothermal Amplification Coupled with Cascade Invasive Reaction and Nanoparticle Hybridization for Subtyping of Influenza A Virus.

Authors:  Ying Chi; Yiyue Ge; Kangchen Zhao; Bingjie Zou; Bin Liu; Xian Qi; Qian Bian; Zhiyang Shi; Fengcai Zhu; Minghao Zhou; Lunbiao Cui; Chuan Su
Journal:  Sci Rep       Date:  2017-03-21       Impact factor: 4.379

7.  Rapid and sensitive detection of novel avian-origin influenza A (H7N9) virus by reverse transcription loop-mediated isothermal amplification combined with a lateral-flow device.

Authors:  Yiyue Ge; Bin Wu; Xian Qi; Kangchen Zhao; Xiling Guo; Yefei Zhu; Yuhua Qi; Zhiyang Shi; Minghao Zhou; Hua Wang; Lunbiao Cui
Journal:  PLoS One       Date:  2013-08-01       Impact factor: 3.240

8.  The variations of VP1 protein might be associated with nervous system symptoms caused by enterovirus 71 infection.

Authors:  Bao Zhang; Xianbo Wu; Keyong Huang; Ling Li; Li Zheng; Chengsong Wan; Ming-Liang He; Wei Zhao
Journal:  BMC Infect Dis       Date:  2014-05-07       Impact factor: 3.090

9.  Detection of influenza viruses by coupling multiplex reverse-transcription loop-mediated isothermal amplification with cascade invasive reaction using nanoparticles as a sensor.

Authors:  Yiyue Ge; Qiang Zhou; Kangchen Zhao; Ying Chi; Bin Liu; Xiaoyan Min; Zhiyang Shi; Bingjie Zou; Lunbiao Cui
Journal:  Int J Nanomedicine       Date:  2017-04-03

10.  Applicability of duplex real time and lateral flow strip reverse-transcription recombinase aided amplification assays for the detection of Enterovirus 71 and Coxsackievirus A16.

Authors:  Xin-Na Li; Xin-Xin Shen; Ming-Hui Li; Ju-Ju Qi; Rui-Huan Wang; Qing-Xia Duan; Rui-Qing Zhang; Tao Fan; Xue-Ding Bai; Guo-Hao Fan; Yao Xie; Xue-Jun Ma
Journal:  Virol J       Date:  2019-12-30       Impact factor: 4.099

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