Literature DB >> 22134124

Short and scalable synthesis of an anhydride precursor of the environment-sensitive fluorophore 6-dimethylaminonaphthalimide.

Kishore Baathulaa1, Yufang Xu, Xuhong Qian.   

Abstract

Environment-sensitive fluorophores have different quantum yields in different solvents. 6-Dimethylaminonaphthalimide (6-DMN), for example, has a low quantum yield in aqueous solutions, but is highly fluorescent in nonpolar solvents or when bound to hydrophobic sites in proteins or membranes. 6-DMN has been used to investigate protein-protein interactions, as well as the in-tissue distribution and internalization of δ-receptors. This protocol describes a highly efficient three-stage synthesis of 6-dimethylamino-2,3-naphthalenedicarboxylic anhydride (compound 1), which is a stable precursor that can be converted to 6-DMN. The three stages are (i) photo-bromination of 4-nitro-o-xylene (yield 82%), (ii) Diels-Alder reaction followed by base hydrolysis, resulting in 6-nitro-2,3-naphthalenedicarboxylic acid (yield 87%) and (iii) reductive amination followed by dehydration (yield 76.5%) to form compound 1. The synthesis can be performed on a gram scale (in 55 h over 3 d) with an overall yield of about 55%. It can easily be modified to prepare related compounds by, for example, performing different reactions using 6-nitro-2,3-naphthalenedicarboxylic acid.

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Year:  2011        PMID: 22134124     DOI: 10.1038/nprot.2011.415

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  15 in total

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4.  Engineering ESPT pathways based on structural analysis of LSSmKate red fluorescent proteins with large Stokes shift.

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5.  Non-peptide cholecystokinin-B/gastrin receptor antagonists based on bicyclic, heteroaromatic skeletons.

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Journal:  J Med Chem       Date:  1996-04-26       Impact factor: 7.446

6.  Matrix metalloproteinase inhibitors containing a (carboxyalkyl)amino zinc ligand: modification of the P1 and P2' residues.

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Journal:  J Med Chem       Date:  1994-03-04       Impact factor: 7.446

7.  Dual fluorescent N-aryl-2,3- naphthalimides: applications in ratiometric DNA detection and white organic light-emitting devices.

Authors:  Premchendar Nandhikonda; Michael D Heagy
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8.  Fluorogenic probes for monitoring peptide binding to class II MHC proteins in living cells.

Authors:  Prasanna Venkatraman; Tina T Nguyen; Matthieu Sainlos; Osman Bilsel; Sriram Chitta; Barbara Imperiali; Lawrence J Stern
Journal:  Nat Chem Biol       Date:  2007-03-11       Impact factor: 15.040

9.  Synthesis of anhydride precursors of the environment-sensitive fluorophores 4-DMAP and 6-DMN.

Authors:  Matthieu Sainlos; Barbara Imperiali
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

10.  Preclinical evaluation of LU 79553: a novel bis-naphthalimide with potent antitumor activity.

Authors:  P F Bousquet; M F Braña; D Conlon; K M Fitzgerald; D Perron; C Cocchiaro; R Miller; M Moran; J George; X D Qian
Journal:  Cancer Res       Date:  1995-03-01       Impact factor: 12.701

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