Literature DB >> 22127874

Recommendations on the statistical analysis of the Comet assay.

Jonathan Bright1, Mike Aylott, Simon Bate, Helena Geys, Philip Jarvis, Jim Saul, Richardus Vonk.   

Abstract

In 2010, the Statisticians in the Pharmaceutical Industry (PSI) Toxicology Special Interest Group met to discuss the design and analysis of the Comet assay. The Comet assay is one potential component of the package of safety studies required by regulatory bodies. As these studies usually involve a three-way nested experimental design and as the distribution of the measured response is usually either lognormal or lognormal plus a point mass at zero, the analysis is not straightforward. This has led to many different types of analysis being proposed in the literature, with several different methods applied within the pharmaceutical industry itself. This article summarises the PSI Toxicology Group's discussions and recommendations around these issues.
Copyright © 2011 John Wiley & Sons, Ltd.

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Year:  2011        PMID: 22127874     DOI: 10.1002/pst.530

Source DB:  PubMed          Journal:  Pharm Stat        ISSN: 1539-1604            Impact factor:   1.894


  16 in total

1.  Genotoxic effects of two-generational selenium deficiency in mouse somatic and testicular cells.

Authors:  Anne Graupner; Christine Instanes; Jill M Andersen; Anicke Brandt-Kjelsen; Stephen D Dertinger; Brit Salbu; Gunnar Brunborg; Ann-Karin Olsen
Journal:  Mutagenesis       Date:  2014-10-30       Impact factor: 3.000

2.  Effect of Surface Modification on the Pulmonary and Systemic Toxicity of Cellulose Nanofibrils.

Authors:  Kukka Aimonen; Mira Hartikainen; Monireh Imani; Satu Suhonen; Gerard Vales; Carlos Moreno; Hanna Saarelainen; Kirsi Siivola; Esa Vanhala; Henrik Wolff; Orlando J Rojas; Hannu Norppa; Julia Catalán
Journal:  Biomacromolecules       Date:  2022-06-09       Impact factor: 6.978

3.  Single cell gel electrophoresis (SCGE) and Pig-a mutation assay in vivo-tools for genotoxicity testing from a regulatory perspective: a study of benzo[a]pyrene in Ogg1(-/-) mice.

Authors:  Anne Graupner; Christine Instanes; Stephen D Dertinger; Jill Mari Andersen; Birgitte Lindeman; Tonje Danielsen Rongved; Gunnar Brunborg; Ann-Karin Olsen
Journal:  Mutat Res Genet Toxicol Environ Mutagen       Date:  2014-08-07       Impact factor: 2.873

4.  Factors influencing heterogeneity of radiation-induced DNA-damage measured by the alkaline comet assay.

Authors:  Clemens Seidel; Christine Lautenschläger; Jürgen Dunst; Arndt-Christian Müller
Journal:  Radiat Oncol       Date:  2012-04-20       Impact factor: 3.481

5.  Genotoxicity of three food processing contaminants in transgenic mice expressing human sulfotransferases 1A1 and 1A2 as assessed by the in vivo alkaline single cell gel electrophoresis assay.

Authors:  Anja Hortemo Høie; Camilla Svendsen; Gunnar Brunborg; Hansruedi Glatt; Jan Alexander; Walter Meinl; Trine Husøy
Journal:  Environ Mol Mutagen       Date:  2015-08-13       Impact factor: 3.216

6.  Gamma radiation at a human relevant low dose rate is genotoxic in mice.

Authors:  Anne Graupner; Dag M Eide; Christine Instanes; Jill M Andersen; Dag A Brede; Stephen D Dertinger; Ole C Lind; Anicke Brandt-Kjelsen; Hans Bjerke; Brit Salbu; Deborah Oughton; Gunnar Brunborg; Ann K Olsen
Journal:  Sci Rep       Date:  2016-09-06       Impact factor: 4.379

7.  Cigarette smoke induced genotoxicity and respiratory tract pathology: evidence to support reduced exposure time and animal numbers in tobacco product testing.

Authors:  Annette Dalrymple; Patricia Ordoñez; David Thorne; David Walker; Oscar M Camacho; Ansgar Büttner; Debbie Dillon; Clive Meredith
Journal:  Inhal Toxicol       Date:  2016-06       Impact factor: 2.724

8.  Bioaccumulation and biological effects of cigarette litter in marine worms.

Authors:  Stephanie L Wright; Darren Rowe; Malcolm J Reid; Kevin V Thomas; Tamara S Galloway
Journal:  Sci Rep       Date:  2015-09-15       Impact factor: 4.379

9.  Statistical analysis of comet assay results.

Authors:  Peter Møller; Steffen Loft
Journal:  Front Genet       Date:  2014-08-27       Impact factor: 4.599

10.  Genotoxic effects of high dose rate X-ray and low dose rate gamma radiation in ApcMin/+ mice.

Authors:  Anne Graupner; Dag M Eide; Dag A Brede; Michele Ellender; Elisabeth Lindbo Hansen; Deborah H Oughton; Simon D Bouffler; Gunnar Brunborg; Ann Karin Olsen
Journal:  Environ Mol Mutagen       Date:  2017-08-30       Impact factor: 3.216

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