Literature DB >> 22124141

Getting the whole picture: combining throughput with content in microscopy.

Nitzan Rimon1, Maya Schuldiner.   

Abstract

The increasing availability and performance of automated scientific equipment in the past decades have brought about a revolution in the biological sciences. The ease with which data can now be generated has led to a new culture of high-throughput science, in which new types of biological questions can be asked and tackled in a systematic and unbiased manner. High-throughput microscopy, also often referred to as high-content screening (HCS), allows acquisition of systematic data at the single-cell level. Moreover, it allows the visualization of an enormous array of cellular features and provides tools to quantify a large number of parameters for each cell. These features make HCS a powerful method to create data that is rich and biologically meaningful without compromising systematic capabilities. In this Commentary, we will discuss recent work, which has used HCS, to demonstrate the diversity of applications and technological solutions that are evolving in this field. Such advances are placing HCS methodologies at the frontier of high-throughput science and enable scientists to combine throughput with content to address a variety of cell biological questions.

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Year:  2011        PMID: 22124141     DOI: 10.1242/jcs.087486

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  14 in total

Review 1.  Imaging flow cytometry: coping with heterogeneity in biological systems.

Authors:  Natasha S Barteneva; Elizaveta Fasler-Kan; Ivan A Vorobjev
Journal:  J Histochem Cytochem       Date:  2012-06-27       Impact factor: 2.479

2.  Beyond annexin V: fluorescence response of cellular membranes to apoptosis.

Authors:  Alexander P Demchenko
Journal:  Cytotechnology       Date:  2012-07-14       Impact factor: 2.058

3.  Sensitive and high resolution localization and tracking of membrane proteins in live cells with BRET.

Authors:  Tien-Hung Lan; Qiuju Liu; Chunman Li; Guangyu Wu; Nevin A Lambert
Journal:  Traffic       Date:  2012-08-05       Impact factor: 6.215

Review 4.  The emergence of proteome-wide technologies: systematic analysis of proteins comes of age.

Authors:  Michal Breker; Maya Schuldiner
Journal:  Nat Rev Mol Cell Biol       Date:  2014-06-18       Impact factor: 94.444

5.  Manganese redistribution by calcium-stimulated vesicle trafficking bypasses the need for P-type ATPase function.

Authors:  Néstor García-Rodríguez; Javier Manzano-López; Miguel Muñoz-Bravo; Elisabet Fernández-García; Manuel Muñiz; Ralf Erik Wellinger
Journal:  J Biol Chem       Date:  2015-02-20       Impact factor: 5.157

Review 6.  The contribution of systematic approaches to characterizing the proteins and functions of the endoplasmic reticulum.

Authors:  Maya Schuldiner; Jonathan S Weissman
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

7.  The details in the distributions: why and how to study phenotypic variability.

Authors:  K A Geiler-Samerotte; C R Bauer; S Li; N Ziv; D Gresham; M L Siegal
Journal:  Curr Opin Biotechnol       Date:  2013-04-06       Impact factor: 9.740

8.  The yeast p5 type ATPase, spf1, regulates manganese transport into the endoplasmic reticulum.

Authors:  Yifat Cohen; Márton Megyeri; Oscar C W Chen; Giuseppe Condomitti; Isabelle Riezman; Ursula Loizides-Mangold; Alaa Abdul-Sada; Nitzan Rimon; Howard Riezman; Frances M Platt; Anthony H Futerman; Maya Schuldiner
Journal:  PLoS One       Date:  2013-12-31       Impact factor: 3.240

9.  A novel single-cell screening platform reveals proteome plasticity during yeast stress responses.

Authors:  Michal Breker; Melissa Gymrek; Maya Schuldiner
Journal:  J Cell Biol       Date:  2013-03-18       Impact factor: 10.539

10.  ODE constrained mixture modelling: a method for unraveling subpopulation structures and dynamics.

Authors:  Jan Hasenauer; Christine Hasenauer; Tim Hucho; Fabian J Theis
Journal:  PLoS Comput Biol       Date:  2014-07-03       Impact factor: 4.475

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