Literature DB >> 22123983

Effects of pressure and temperature on the binding of RecA protein to single-stranded DNA.

Jack Merrin1, Pradeep Kumar, Albert Libchaber.   

Abstract

The binding and polymerization of RecA protein to DNA is required for recombination, which is an essential function of life. We study the pressure and temperature dependence of RecA binding to single-stranded DNA in the presence of adenosine 5'-[γ-thio]triphosphate (ATP[γ-S]), in a temperature regulated high pressure cell using fluorescence anisotropy. Measurements were possible at temperatures between 5-60 °C and pressures up to 300 MPa. Experiments were performed on Escherichia coli RecA and RecA from a thermophilic bacteria, Thermus thermophilus. For E. coli RecA at a given temperature, binding is a monotonically decreasing and reversible function of pressure. At atmospheric pressure, E. coli RecA binding decreases monotonically up to 42 °C, where a sharp transition to the unbound state indicates irreversible heat inactivation. T. thermophilus showed no such transition within the temperature range of our apparatus. Furthermore, we find that binding occurs for a wider range of pressure and temperature for T. thermophilus compared to E. coli RecA, suggesting a correlation between thermophilicity and barophilicity. We use a two-state model of RecA binding/unbinding to extract the associated thermodynamic parameters. For E. coli, we find that the binding/unbinding phase boundary is hyperbolic. Our results of the binding of RecA from E. coli and T. thermophilus show adaptation to pressure and temperature at the single protein level.

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Year:  2011        PMID: 22123983      PMCID: PMC3250178          DOI: 10.1073/pnas.1112646108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

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Journal:  Protein Expr Purif       Date:  2002-12       Impact factor: 1.650

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Journal:  Arch Biochem Biophys       Date:  1963-05       Impact factor: 4.013

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Authors:  Tsvi Tlusty; Roy Bar-Ziv; Albert Libchaber
Journal:  Phys Rev Lett       Date:  2004-12-14       Impact factor: 9.161

6.  Are the catalytic properties of enzymes from piezophilic organisms pressure adapted?

Authors:  Sam Hay; Rhiannon M Evans; Colin Levy; E Joel Loveridge; Xi Wang; David Leys; Rudolf K Allemann; Nigel S Scrutton
Journal:  Chembiochem       Date:  2009-09-21       Impact factor: 3.164

7.  The pressure dependence of hydrophobic interactions is consistent with the observed pressure denaturation of proteins.

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Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

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10.  Water-like solvation thermodynamics in a spherically symmetric solvent model with two characteristic lengths.

Authors:  Sergey V Buldyrev; Pradeep Kumar; Pablo G Debenedetti; Peter J Rossky; H Eugene Stanley
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-11       Impact factor: 11.205

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  7 in total

1.  Volume of Hsp90 ligand binding and the unfolding phase diagram as a function of pressure and temperature.

Authors:  Vytautas Petrauskas; Joana Gylytė; Zigmantas Toleikis; Piotras Cimmperman; Daumantas Matulis
Journal:  Eur Biophys J       Date:  2013-01-05       Impact factor: 1.733

2.  Pressure and temperature dependence of growth and morphology of Escherichia coli: experiments and stochastic model.

Authors:  Pradeep Kumar; Albert Libchaber
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

3.  Defining the functional potential and active community members of a sediment microbial community in a high-arctic hypersaline subzero spring.

Authors:  Chih-Ying Lay; Nadia C S Mykytczuk; Étienne Yergeau; Guillaume Lamarche-Gagnon; Charles W Greer; Lyle G Whyte
Journal:  Appl Environ Microbiol       Date:  2013-04-05       Impact factor: 4.792

4.  New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases.

Authors:  Louise Lassalle; Sylvain Engilberge; Dominique Madern; Pierre Vauclare; Bruno Franzetti; Eric Girard
Journal:  Sci Rep       Date:  2016-02-11       Impact factor: 4.379

5.  Disturbance-free rapid solution exchange for magnetic tweezers single-molecule studies.

Authors:  Shimin Le; Mingxi Yao; Jin Chen; Artem K Efremov; Sara Azimi; Jie Yan
Journal:  Nucleic Acids Res       Date:  2015-05-24       Impact factor: 16.971

6.  Structural basis of the strong cell-cell junction formed by cadherin-23.

Authors:  G S Singaraju; A Sagar; A Kumar; J S Samuel; J P Hazra; M K Sannigrahi; R M Yennamalli; Fnu Ashish; S Rakshit
Journal:  FEBS J       Date:  2019-11-15       Impact factor: 5.542

7.  Bacterial motility measured by a miniature chamber for high-pressure microscopy.

Authors:  Masayoshi Nishiyama; Seiji Kojima
Journal:  Int J Mol Sci       Date:  2012-07-24       Impact factor: 6.208

  7 in total

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