Literature DB >> 22118678

Titration-based screening for evaluation of natural product extracts: identification of an aspulvinone family of luciferase inhibitors.

Patricia G Cruz1, Douglas S Auld, Pamela J Schultz, Scott Lovell, Kevin P Battaile, Ryan MacArthur, Min Shen, Giselle Tamayo-Castillo, James Inglese, David H Sherman.   

Abstract

The chemical diversity of nature has tremendous potential for the discovery of molecular probes and medicinal agents. However, sensitivity of HTS assays to interfering components of crude extracts derived from plants, and macro- and microorganisms has curtailed their use in lead discovery. Here, we describe a process for leveraging the concentration-response curves obtained from quantitative HTS to improve the initial selection of "actives" from a library of partially fractionated natural product extracts derived from marine actinomycetes and fungi. By using pharmacological activity, the first-pass CRC paradigm improves the probability that labor-intensive subsequent steps of reculturing, extraction, and bioassay-guided isolation of active component(s) target the most promising strains and growth conditions. We illustrate how this process identified a family of fungal metabolites as potent inhibitors of firefly luciferase, subsequently resolved in molecular detail by X-ray crystallography.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22118678      PMCID: PMC3225805          DOI: 10.1016/j.chembiol.2011.08.011

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  41 in total

Review 1.  Natural products as sources of new drugs over the period 1981-2002.

Authors:  David J Newman; Gordon M Cragg; Kenneth M Snader
Journal:  J Nat Prod       Date:  2003-07       Impact factor: 4.050

2.  Rediscovering natural products as a source of new drugs.

Authors:  Frank E Koehn; Guy T Carter
Journal:  Discov Med       Date:  2005-04       Impact factor: 2.970

3.  Compound Management for Quantitative High-Throughput Screening.

Authors:  Adam Yasgar; Paul Shinn; Ajit Jadhav; Douglas Auld; Sam Michael; Wei Zheng; Christopher P Austin; James Inglese; Anton Simeonov
Journal:  JALA Charlottesv Va       Date:  2008-04

4.  A quantitative high-throughput screen for modulators of IL-6 signaling: a model for interrogating biological networks using chemical libraries.

Authors:  Ronald L Johnson; Ruili Huang; Ajit Jadhav; Noel Southall; Jennifer Wichterman; Ryan MacArthur; Menghang Xia; Kun Bi; John Printen; Christopher P Austin; James Inglese
Journal:  Mol Biosyst       Date:  2009-06-19

5.  New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays.

Authors:  Jonathan B Baell; Georgina A Holloway
Journal:  J Med Chem       Date:  2010-04-08       Impact factor: 7.446

6.  Butyrolactones from Aspergillus terreus.

Authors:  K V Rao; A K Sadhukhan; M Veerender; V Ravikumar; E V Mohan; S D Dhanvantri; M Sitaramkumar; J M Babu; K Vyas; G O Reddy
Journal:  Chem Pharm Bull (Tokyo)       Date:  2000-04       Impact factor: 1.645

7.  Butyrolactone I derivatives from Aspergillus terreus carrying an unusual sulfate moiety.

Authors:  Xuemei Niu; Hans-Martin Dahse; Klaus-Dieter Menzel; Olivier Lozach; Grit Walther; Laurent Meijer; Susanne Grabley; Isabel Sattler
Journal:  J Nat Prod       Date:  2008-02-14       Impact factor: 4.050

8.  A specific mechanism for nonspecific activation in reporter-gene assays.

Authors:  Douglas S Auld; Natasha Thorne; Dac-Trung Nguyen; James Inglese
Journal:  ACS Chem Biol       Date:  2008-07-01       Impact factor: 5.100

Review 9.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Comprehensive characterization of cytochrome P450 isozyme selectivity across chemical libraries.

Authors:  Henrike Veith; Noel Southall; Ruili Huang; Tim James; Darren Fayne; Natalia Artemenko; Min Shen; James Inglese; Christopher P Austin; David G Lloyd; Douglas S Auld
Journal:  Nat Biotechnol       Date:  2009-10-25       Impact factor: 54.908

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  12 in total

1.  High-throughput screen of natural product extracts in a yeast model of polyglutamine proteotoxicity.

Authors:  Gladis M Walter; Avi Raveh; Sue-Ann Mok; Thomas J McQuade; Carl J Arevang; Pamela J Schultz; Matthew C Smith; Samuel Asare; Patricia G Cruz; Susanne Wisen; Teatulohi Matainaho; David H Sherman; Jason E Gestwicki
Journal:  Chem Biol Drug Des       Date:  2014-04       Impact factor: 2.817

2.  Actinoramide A Identified as a Potent Antimalarial from Titration-Based Screening of Marine Natural Product Extracts.

Authors:  Ken Chih-Chien Cheng; Shugeng Cao; Avi Raveh; Ryan MacArthur; Patricia Dranchak; George Chlipala; Matthew T Okoneski; Rajarshi Guha; Richard T Eastman; Jing Yuan; Pamela J Schultz; Xin-Zhuan Su; Giselle Tamayo-Castillo; Teatulohi Matainaho; Jon Clardy; David H Sherman; James Inglese
Journal:  J Nat Prod       Date:  2015-10-14       Impact factor: 4.050

3.  UPLC-MS-ELSD-PDA as a powerful dereplication tool to facilitate compound identification from small-molecule natural product libraries.

Authors:  Jin Yang; Qian Liang; Mei Wang; Cynthia Jeffries; David Smithson; Ying Tu; Nidal Boulos; Melissa R Jacob; Anang A Shelat; Yunshan Wu; Ranga Rao Ravu; Richard Gilbertson; Mitchell A Avery; Ikhlas A Khan; Larry A Walker; R Kiplin Guy; Xing-Cong Li
Journal:  J Nat Prod       Date:  2014-03-11       Impact factor: 4.050

4.  Identification of 2-Benzylidene-tetralone Derivatives as Highly Potent and Reversible Firefly Luciferase Inhibitors.

Authors:  Yunzhi Li; Chaoying Jin; Huiying Xu; Weijian Wu; Youqiao Wang; Jiaxin Wu; Tingyu Liu; Guohui Wan; Xin Yue; Xianzhang Bu
Journal:  ACS Med Chem Lett       Date:  2022-01-20       Impact factor: 4.345

5.  Bioconversion of 6-epi-Notoamide T Produces Metabolites of Unprecedented Structures in a Marine-derived Aspergillus sp.

Authors:  Hikaru Kato; Takashi Nakahara; Michitaka Yamaguchi; Ippei Kagiyama; Jennifer M Finefield; James D Sunderhaus; David H Sherman; Robert M Williams; Sachiko Tsukamoto
Journal:  Tetrahedron Lett       Date:  2015-01-01       Impact factor: 2.415

6.  Firefly luciferase in chemical biology: a compendium of inhibitors, mechanistic evaluation of chemotypes, and suggested use as a reporter.

Authors:  Natasha Thorne; Min Shen; Wendy A Lea; Anton Simeonov; Scott Lovell; Douglas S Auld; James Inglese
Journal:  Chem Biol       Date:  2012-08-24

Review 7.  Matching the power of high throughput screening to the chemical diversity of natural products.

Authors:  Curtis J Henrich; John A Beutler
Journal:  Nat Prod Rep       Date:  2013-08-08       Impact factor: 13.423

8.  Development and Implementation of an HTS-Compatible Assay for the Discovery of Selective Small-Molecule Ligands for Pre-microRNAs.

Authors:  Daniel A Lorenz; Steve Vander Roest; Martha J Larsen; Amanda L Garner
Journal:  SLAS Discov       Date:  2017-07-07       Impact factor: 3.341

9.  Spatial regulation of a common precursor from two distinct genes generates metabolite diversity.

Authors:  Chun-Jun Guo; Wei-Wen Sun; Kenneth S Bruno; Berl R Oakley; Nancy P Keller; Clay C C Wang
Journal:  Chem Sci       Date:  2015-07-13       Impact factor: 9.825

10.  The 9H-Fluoren Vinyl Ether Derivative SAM461 Inhibits Bacterial Luciferase Activity and Protects Artemia franciscana From Luminescent Vibriosis.

Authors:  Alberto J Martín-Rodríguez; Sergio J Álvarez-Méndez; Caroline Overå; Kartik Baruah; Tânia Margarida Lourenço; Parisa Norouzitallab; Peter Bossier; Víctor S Martín; José J Fernández
Journal:  Front Cell Infect Microbiol       Date:  2018-11-08       Impact factor: 5.293

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