Literature DB >> 22115833

Androglobin: a chimeric globin in metazoans that is preferentially expressed in Mammalian testes.

David Hoogewijs1, Bettina Ebner, Francesca Germani, Federico G Hoffmann, Andrej Fabrizius, Luc Moens, Thorsten Burmester, Sylvia Dewilde, Jay F Storz, Serge N Vinogradov, Thomas Hankeln.   

Abstract

Comparative genomic studies have led to the recent identification of several novel globin types in the Metazoa. They have revealed a surprising evolutionary diversity of functions beyond the familiar O(2) supply roles of hemoglobin and myoglobin. Here we report the discovery of a hitherto unrecognized family of proteins with a unique modular architecture, possessing an N-terminal calpain-like domain, an internal, circular permuted globin domain, and an IQ calmodulin-binding motif. Putative orthologs are present in the genomes of many metazoan taxa, including vertebrates. The calpain-like region is homologous to the catalytic domain II of the large subunit of human calpain-7. The globin domain satisfies the criteria of a myoglobin-like fold but is rearranged and split into two parts. The recombinantly expressed human globin domain exhibits an absorption spectrum characteristic of hexacoordination of the heme iron atom. Molecular evolutionary analyses indicate that this chimeric globin family is phylogenetically ancient and originated in the common ancestor to animals and choanoflagellates. In humans and mice, the gene is predominantly expressed in testis tissue, and we propose the name "androglobin" (Adgb). Expression is associated with postmeiotic stages of spermatogenesis and is insensitive to experimental hypoxia. Evidence exists for increased gene expression in fertile compared with infertile males.

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Year:  2011        PMID: 22115833      PMCID: PMC3350324          DOI: 10.1093/molbev/msr246

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  60 in total

1.  Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.

Authors:  J Gough; K Karplus; R Hughey; C Chothia
Journal:  J Mol Biol       Date:  2001-11-02       Impact factor: 5.469

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  ONCOMINE: a cancer microarray database and integrated data-mining platform.

Authors:  Daniel R Rhodes; Jianjun Yu; K Shanker; Nandan Deshpande; Radhika Varambally; Debashis Ghosh; Terrence Barrette; Akhilesh Pandey; Arul M Chinnaiyan
Journal:  Neoplasia       Date:  2004 Jan-Feb       Impact factor: 5.715

4.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

5.  Biochemical characterization and ligand binding properties of neuroglobin, a novel member of the globin family.

Authors:  S Dewilde; L Kiger; T Burmester; T Hankeln; V Baudin-Creuza; T Aerts; M C Marden; R Caubergs; L Moens
Journal:  J Biol Chem       Date:  2001-07-25       Impact factor: 5.157

Review 6.  Regulation of oxygen affinity of hemoglobin: influence of structure of the globin on the heme iron.

Authors:  M F Perutz
Journal:  Annu Rev Biochem       Date:  1979       Impact factor: 23.643

7.  Determinants of a protein fold. Unique features of the globin amino acid sequences.

Authors:  D Bashford; C Chothia; A M Lesk
Journal:  J Mol Biol       Date:  1987-07-05       Impact factor: 5.469

8.  How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins.

Authors:  A M Lesk; C Chothia
Journal:  J Mol Biol       Date:  1980-01-25       Impact factor: 5.469

9.  Expression analysis of neuroglobin mRNA in rodent tissues.

Authors:  S Reuss; S Saaler-Reinhardt; B Weich; S Wystub; M H Reuss; T Burmester; T Hankeln
Journal:  Neuroscience       Date:  2002       Impact factor: 3.590

Review 10.  The calpain system.

Authors:  Darrell E Goll; ValeryY F Thompson; Hongqi Li; Wei Wei; Jinyang Cong
Journal:  Physiol Rev       Date:  2003-07       Impact factor: 37.312

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  45 in total

1.  Evolution of the globin gene family in deuterostomes: lineage-specific patterns of diversification and attrition.

Authors:  Federico G Hoffmann; Juan C Opazo; David Hoogewijs; Thomas Hankeln; Bettina Ebner; Serge N Vinogradov; Xavier Bailly; Jay F Storz
Journal:  Mol Biol Evol       Date:  2012-01-24       Impact factor: 16.240

Review 2.  A review of the multi-level adaptations for maximizing aerobic dive duration in marine mammals: from biochemistry to behavior.

Authors:  Randall W Davis
Journal:  J Comp Physiol B       Date:  2013-10-15       Impact factor: 2.200

3.  The globin gene repertoire of lampreys: convergent evolution of hemoglobin and myoglobin in jawed and jawless vertebrates.

Authors:  Kim Schwarze; Kevin L Campbell; Thomas Hankeln; Jay F Storz; Federico G Hoffmann; Thorsten Burmester
Journal:  Mol Biol Evol       Date:  2014-07-23       Impact factor: 16.240

4.  Neuroglobin Expression in the Mammalian Auditory System.

Authors:  Stefan Reuss; Ovidiu Banica; Mirra Elgurt; Stephanie Mitz; Ursula Disque-Kaiser; Randolf Riemann; Marco Hill; Dawn V Jaquish; Fred J Koehrn; Thorsten Burmester; Thomas Hankeln; Nigel K Woolf
Journal:  Mol Neurobiol       Date:  2015-01-31       Impact factor: 5.590

5.  Ancient Duplications and Expression Divergence in the Globin Gene Superfamily of Vertebrates: Insights from the Elephant Shark Genome and Transcriptome.

Authors:  Juan C Opazo; Alison P Lee; Federico G Hoffmann; Jessica Toloza-Villalobos; Thorsten Burmester; Byrappa Venkatesh; Jay F Storz
Journal:  Mol Biol Evol       Date:  2015-03-04       Impact factor: 16.240

6.  Characterization of unusual truncated hemoglobins of Chlamydomonas reinhardtii suggests specialized functions.

Authors:  Dennis Huwald; Peer Schrapers; Ramona Kositzki; Michael Haumann; Anja Hemschemeier
Journal:  Planta       Date:  2015-04-19       Impact factor: 4.116

7.  The Hemoglobin Homolog Cytoglobin in Smooth Muscle Inhibits Apoptosis and Regulates Vascular Remodeling.

Authors:  Frances L Jourd'heuil; Haiyan Xu; Timothy Reilly; Keneta McKellar; Chaymae El Alaoui; Julia Steppich; Yong Feng Liu; Wen Zhao; Roman Ginnan; David Conti; Reynold Lopez-Soler; Arif Asif; Rebecca K Keller; John J Schwarz; Le Thi Thanh Thuy; Norifumi Kawada; Xiaochun Long; Harold A Singer; David Jourd'heuil
Journal:  Arterioscler Thromb Vasc Biol       Date:  2017-08-10       Impact factor: 8.311

8.  Mechanisms of neuroprotection from hypoxia-ischemia (HI) brain injury by up-regulation of cytoglobin (CYGB) in a neonatal rat model.

Authors:  Shu-Feng Tian; Han-Hua Yang; Dan-Ping Xiao; Yue-Jun Huang; Gu-Yu He; Hai-Ran Ma; Fang Xia; Xue-Chuan Shi
Journal:  J Biol Chem       Date:  2013-04-12       Impact factor: 5.157

Review 9.  Gene duplication, genome duplication, and the functional diversification of vertebrate globins.

Authors:  Jay F Storz; Juan C Opazo; Federico G Hoffmann
Journal:  Mol Phylogenet Evol       Date:  2012-07-27       Impact factor: 4.286

10.  Androglobin knockdown inhibits growth of glioma cell lines.

Authors:  Bo Huang; Yi-Sheng Lu; Xia Li; Zhi-Chuan Zhu; Kui Li; Ji-Wei Liu; Jing Zheng; Ze-Lan Hu
Journal:  Int J Clin Exp Pathol       Date:  2014-04-15
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