Literature DB >> 22112494

Issues in collecting, processing and storing human tissues and associated information to support biomedical research.

William E Grizzle1, Walter C Bell, Katherine C Sexton.   

Abstract

The availability of human tissues to support biomedical research is critical to advance translational research focused on identifying and characterizing approaches to individualized (personalized) medical care. Providing such tissues relies on three acceptable models - a tissue banking model, a prospective collection model and a combination of these two models. An unacceptable model is the "catch as catch can" model in which tissues are collected, processed and stored without goals or a plan or without standard operating procedures, i.e., portions of tissues are collected as available and processed and stored when time permits. In the tissue banking model, aliquots of tissues are collected according to SOPs. Usually specific sizes and types of tissues are collected and processed (e.g., 0.1 gm of breast cancer frozen in OCT). Using the banking model, tissues may be collected that may not be used and/or do not meet specific needs of investigators; however, at the time of an investigator request, tissues are readily available as is clinical information including clinical outcomes. In the model of prospective collection, tissues are collected based upon investigator requests including specific requirements of investigators. For example, the investigator may request that two 0.15 gm matching aliquots of breast cancer be minced while fresh, put in RPMI media with and without fetal calf serum, cooled to 4°C and shipped to the investigator on wet ice. Thus, the tissues collected prospectively meet investigator needs, all collected specimens are utilized and storage of specimens is minimized; however, investigators must wait until specimens are collected, and if needed, for clinical outcome. The operation of any tissue repository requires well trained and dedicated personnel. A quality assurance program is required which provides quality control information on the diagnosis of a specimen that is matched specifically to the specimen provided to an investigator instead of an overall diagnosis of the specimen via a surgical pathology report. This is necessary because a specific specimen may not match the diagnosis of the case due to many factors such as necrosis, unsuspected tumor invasion of apparently normal tissue, and areas of fibrosis which are mistaken grossly for tumor. Aliquots for quality control (QC) may or may not be collected at the time of collection and in some cases, QC may not occur until specimens are distributed to investigators. In establishing a tumor repository, multiple issues need to be considered. These include the available resources, long term support, space and equipment. The needs of the potential users need to be identified as to the types of tissues and services needed and the annotation expected. Other specific issues to be considered include collection of specimens potentially infected with blood borne pathogens (e.g., hepatitis B), charge back mechanisms, informatics needs and support, and investigator requirements (e.g., recognition of repository contributions in publications). In general, the repository should not perform the research of the investigators, but should provide the infrastructure necessary to support the research of the investigator. Thus, the goals of the repository must be established. Similarly, ethical and regulatory issues must be evaluated. In general, tissue repositories need ethical (e.g., IRB) and privacy (e.g., HIPAA) review. Also, safety issues need to be considered as well as how biohazards will be addressed by investigator-users. Considerations involving the transfer of specimens to other organization usually require a material transfer agreement (MTA). A MTA should address biohazards as well as indemnification. Thus, many issues must be considered and addressed in order to establish and operate successfully a biorepository.

Entities:  

Mesh:

Year:  2010        PMID: 22112494      PMCID: PMC3445033          DOI: 10.3233/CBM-2011-0183

Source DB:  PubMed          Journal:  Cancer Biomark        ISSN: 1574-0153            Impact factor:   4.388


  33 in total

1.  Effects of ischemia on gene expression.

Authors:  J Huang; R Qi; J Quackenbush; E Dauway; E Lazaridis; T Yeatman
Journal:  J Surg Res       Date:  2001-08       Impact factor: 2.192

Review 2.  Organizational issues in providing high-quality human tissues and clinical information for the support of biomedical research.

Authors:  Walter C Bell; Katherine C Sexton; William E Grizzle
Journal:  Methods Mol Biol       Date:  2010

Review 3.  Special symposium: fixation and tissue processing models.

Authors:  W E Grizzle
Journal:  Biotech Histochem       Date:  2009-10       Impact factor: 1.718

4.  Quality Assurance in Tissue Resources Supporting Biomedical Research.

Authors:  William E Grizzle; Katherine C Sexton; Walter C Bell
Journal:  Cell Preserv Technol       Date:  2008-07-30

5.  Stability of phosphoprotein as a biological marker of tumor signaling.

Authors:  Amanda F Baker; Tomislav Dragovich; Nathan T Ihle; Ryan Williams; Cecilia Fenoglio-Preiser; Garth Powis
Journal:  Clin Cancer Res       Date:  2005-06-15       Impact factor: 12.531

6.  Analysis of the molecular quality of human tissues: an experience from the Cooperative Human Tissue Network.

Authors:  Scott D Jewell; Mythily Srinivasan; Linda M McCart; Nita Williams; William H Grizzle; Virginia LiVolsi; Greg MacLennan; Daniel D Sedmak
Journal:  Am J Clin Pathol       Date:  2002-11       Impact factor: 2.493

7.  Standard operating procedures for serum and plasma collection: early detection research network consensus statement standard operating procedure integration working group.

Authors:  Melissa K Tuck; Daniel W Chan; David Chia; Andrew K Godwin; William E Grizzle; Karl E Krueger; William Rom; Martin Sanda; Lynn Sorbara; Sanford Stass; Wendy Wang; Dean E Brenner
Journal:  J Proteome Res       Date:  2009-01       Impact factor: 4.466

8.  Providing human tissues for research: how to establish a program.

Authors:  W E Grizzle; R Aamodt; K Clausen; V LiVolsi; T G Pretlow; S Qualman
Journal:  Arch Pathol Lab Med       Date:  1998-12       Impact factor: 5.534

9.  Racial differences in trust and regular source of patient care and the implications for prostate cancer screening use.

Authors:  William R Carpenter; Paul A Godley; Jack A Clark; James A Talcott; Timothy Finnegan; Merle Mishel; Jeannette Bensen; Walter Rayford; L Joseph Su; Elizabeth T H Fontham; James L Mohler
Journal:  Cancer       Date:  2009-11-01       Impact factor: 6.860

10.  the need for review and understanding of SELDI/MALDI mass spectroscopy data prior to analysis.

Authors:  William E Grizzle; O John Semmes; William Bigbee; Liu Zhu; Gunjan Malik; Denise K Oelschlager; Barkha Manne; Upender Manne
Journal:  Cancer Inform       Date:  2005
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  29 in total

Review 1.  [Maintainance of a research tissue bank. (Infra)structural and quality aspects].

Authors:  S Schmitt; K Kynast; P Schirmacher; E Herpel
Journal:  Pathologe       Date:  2015-11       Impact factor: 1.011

2.  Challenges for quality management in implementation, maintenance, and sustainability of research tissue biobanks.

Authors:  S Schmitt; K Kynast; P Schirmacher; E Herpel
Journal:  Virchows Arch       Date:  2015-08-14       Impact factor: 4.064

3.  Commentary on Improving Biospecimen Utilization by Classic Biobanks: Identifying Past and Minimizing Future Mistakes.

Authors:  William E Grizzle; Katherine C Sexton
Journal:  Biopreserv Biobank       Date:  2018-12-01       Impact factor: 2.300

4.  Amygdala levels of the GluA1 subunit of glutamate receptors and its phosphorylation state at serine 845 in the anterior hippocampus are biomarkers of ictal fear but not anxiety.

Authors:  Rodrigo Bainy Leal; Mark William Lopes; Douglas Affonso Formolo; Cristiane Ribeiro de Carvalho; Alexandre Ademar Hoeller; Alexandra Latini; Daniel Santos Sousa; Peter Wolf; Rui Daniel Prediger; Zuner Assis Bortolotto; Marcelo Neves Linhares; Kátia Lin; Roger Walz
Journal:  Mol Psychiatry       Date:  2018-06-07       Impact factor: 15.992

5.  Quality management of biorepositories.

Authors:  William E Grizzle; Elaine W Gunter; Katherine C Sexton; Walter C Bell
Journal:  Biopreserv Biobank       Date:  2015-06       Impact factor: 2.300

6.  The Utilization of Biospecimens: Impact of the Choice of Biobanking Model.

Authors:  William E Grizzle; Marianna J Bledsoe; Sameer Al Diffalha; Dennis Otali; Katherine C Sexton
Journal:  Biopreserv Biobank       Date:  2019-06       Impact factor: 2.300

7.  Use of human specimens in research: the evolving United States regulatory, policy, and scientific landscape.

Authors:  Marianna J Bledsoe; William E Grizzle
Journal:  Diagn Histopathol (Oxf)       Date:  2013-09

8.  A biorepository for ophthalmic surgical specimens.

Authors:  Jessica M Skeie; Stephen H Tsang; Ryan Vande Zande; Macy M Fickbohm; Shaival S Shah; John G Vallone; Vinit B Mahajan
Journal:  Proteomics Clin Appl       Date:  2013-11-22       Impact factor: 3.494

9.  Long-term storage of endocrine tissues at - 80°C does not adversely affect RNA quality or overall histomorphology.

Authors:  Adam Andreasson; Nimrod B Kiss; C Christofer Juhlin; Anders Höög
Journal:  Biopreserv Biobank       Date:  2013-12       Impact factor: 2.300

10.  The prognostic value of microRNAs varies with patient race/ethnicity and stage of colorectal cancer.

Authors:  Liselle C Bovell; Chandrakumar Shanmugam; Balananda-Dhurjati K Putcha; Venkat R Katkoori; Bin Zhang; Sejong Bae; Karan P Singh; William E Grizzle; Upender Manne
Journal:  Clin Cancer Res       Date:  2013-05-29       Impact factor: 12.531

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