Literature DB >> 22105930

Discovery of a potent and highly β1 specific proteasome inhibitor from a focused library of urea-containing peptide vinyl sulfones and peptide epoxyketones.

Wouter A van der Linden1, Lianne I Willems, Tamer B Shabaneh, Nan Li, Mark Ruben, Bogdan I Florea, Gijs A van der Marel, Markus Kaiser, Alexei F Kisselev, Herman S Overkleeft.   

Abstract

Syringolins, a class of natural products, potently and selectively inhibit the proteasome and show promising antitumour activity. To gain insight in the mode of action of syringolins, the ureido structural element present in syringolins is incorporated in oligopeptide vinyl sulfones and peptide epoxyketones yielding a focused library of potent new proteasome inhibitors. The distance of the ureido linkage with respect to the electrophilic trap strongly influences subunit selectivity within the proteasome. Compounds 13 and 15 are β5 selective and their potency exceeds that of syringolin A. In contrast, 5 may well be the most potent β1 selective compound active in living cells reported to date.

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Year:  2011        PMID: 22105930      PMCID: PMC3769973          DOI: 10.1039/c1ob06554h

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  37 in total

1.  Synthesis of Peptide Isocyanates and Isothiocyanates.

Authors:  James S. Nowick; Darren L. Holmes; Glenn Noronha; Eric M. Smith; Tram M. Nguyen; Sheng-Lin Huang
Journal:  J Org Chem       Date:  1996-05-31       Impact factor: 4.354

2.  Mixing of peptides and electrophilic traps gives rise to potent, broad-spectrum proteasome inhibitors.

Authors:  Martijn Verdoes; Bogdan I Florea; Wouter A van der Linden; Didier Renou; Adrianus M C H van den Nieuwendijk; Gijs A van der Marel; Herman S Overkleeft
Journal:  Org Biomol Chem       Date:  2007-03-23       Impact factor: 3.876

3.  Proteasome activity imaging and profiling characterizes bacterial effector syringolin A.

Authors:  Izabella Kolodziejek; Johana C Misas-Villamil; Farnusch Kaschani; Jérôme Clerc; Christian Gu; Daniel Krahn; Sherry Niessen; Martijn Verdoes; Lianne I Willems; Hermen S Overkleeft; Markus Kaiser; Renier A L van der Hoorn
Journal:  Plant Physiol       Date:  2010-11-02       Impact factor: 8.340

4.  Simple route to sterically pure diketopiperazines.

Authors:  D E Nitecki; B Halpern; J W Westley
Journal:  J Org Chem       Date:  1968-02       Impact factor: 4.354

5.  Total synthesis of syringolin A and B.

Authors:  Michael C Pirrung; Goutam Biswas; Tannya R Ibarra-Rivera
Journal:  Org Lett       Date:  2010-05-21       Impact factor: 6.005

6.  Specific cell-permeable inhibitor of proteasome trypsin-like sites selectively sensitizes myeloma cells to bortezomib and carfilzomib.

Authors:  Anne C Mirabella; Alexandre A Pletnev; Sondra L Downey; Bogdan I Florea; Tamer B Shabaneh; Matthew Britton; Martijn Verdoes; Dmitri V Filippov; Herman S Overkleeft; Alexei F Kisselev
Journal:  Chem Biol       Date:  2011-05-27

7.  Pseudomonas syringae virulence factor syringolin A counteracts stomatal immunity by proteasome inhibition.

Authors:  Barbara Schellenberg; Christina Ramel; Robert Dudler
Journal:  Mol Plant Microbe Interact       Date:  2010-10       Impact factor: 4.171

8.  Incorporation of fluorinated phenylalanine generates highly specific inhibitor of proteasome's chymotrypsin-like sites.

Authors:  Paul P Geurink; Nora Liu; Michiel P Spaans; Sondra L Downey; Adrianus M C H van den Nieuwendijk; Gijsbert A van der Marel; Alexei F Kisselev; Bogdan I Florea; Herman S Overkleeft
Journal:  J Med Chem       Date:  2010-03-11       Impact factor: 7.446

9.  Design and synthesis of an orally bioavailable and selective peptide epoxyketone proteasome inhibitor (PR-047).

Authors:  Han-Jie Zhou; Monette A Aujay; Mark K Bennett; Maya Dajee; Susan D Demo; Ying Fang; Mark N Ho; Jing Jiang; Christopher J Kirk; Guy J Laidig; Evan R Lewis; Yan Lu; Tony Muchamuel; Francesco Parlati; Eileen Ring; Kevin D Shenk; Jamie Shields; Peter J Shwonek; Timothy Stanton; Congcong M Sun; Catherine Sylvain; Tina M Woo; Jinfu Yang
Journal:  J Med Chem       Date:  2009-05-14       Impact factor: 7.446

10.  Synthesis and structure-activity correlation of a brunsvicamide-inspired cyclopeptide collection.

Authors:  Thilo Walther; Steffen Renner; Herbert Waldmann; Hans-Dieter Arndt
Journal:  Chembiochem       Date:  2009-05-04       Impact factor: 3.164

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  10 in total

Review 1.  Proteasome inhibitors: an expanding army attacking a unique target.

Authors:  Alexei F Kisselev; Wouter A van der Linden; Herman S Overkleeft
Journal:  Chem Biol       Date:  2012-01-27

2.  Discovery of an Inhibitor of the Proteasome Subunit Rpn11.

Authors:  Christian Perez; Jing Li; Francesco Parlati; Matthieu Rouffet; Yuyong Ma; Andrew L Mackinnon; Tsui-Fen Chou; Raymond J Deshaies; Seth M Cohen
Journal:  J Med Chem       Date:  2017-02-13       Impact factor: 7.446

Review 3.  Targeting Metalloenzymes for Therapeutic Intervention.

Authors:  Allie Y Chen; Rebecca N Adamek; Benjamin L Dick; Cy V Credille; Christine N Morrison; Seth M Cohen
Journal:  Chem Rev       Date:  2018-09-07       Impact factor: 60.622

Review 4.  Harnessing proteasome dynamics and allostery in drug design.

Authors:  Maria Gaczynska; Pawel A Osmulski
Journal:  Antioxid Redox Signal       Date:  2014-02-21       Impact factor: 8.401

Review 5.  Subunit specific inhibitors of proteasomes and their potential for immunomodulation.

Authors:  Alexei F Kisselev; Marcus Groettrup
Journal:  Curr Opin Chem Biol       Date:  2014-09-15       Impact factor: 8.822

6.  Oral proteasome inhibitor with strong preclinical efficacy in myeloma models.

Authors:  Jonghoon Park; Eok Park; Cheol-Kyu Jung; Seung-Wan Kang; Byung Gyu Kim; Youngjoo Jung; Tae Hun Kim; Ji-Young Lim; Sung-Eun Lee; Chang-Ki Min; Kwang-Ai Won
Journal:  BMC Cancer       Date:  2016-03-24       Impact factor: 4.430

Review 7.  Structural and Functional Basis of JAMM Deubiquitinating Enzymes in Disease.

Authors:  Xin Pan; Sihua Wu; Wenping Wei; Zixuan Chen; Yong Wu; Kaizheng Gong
Journal:  Biomolecules       Date:  2022-06-29

8.  Assessing subunit dependency of the Plasmodium proteasome using small molecule inhibitors and active site probes.

Authors:  Hao Li; Wouter A van der Linden; Martijn Verdoes; Bogdan I Florea; Fiona E McAllister; Kavitha Govindaswamy; Joshua E Elias; Purnima Bhanot; Herman S Overkleeft; Matthew Bogyo
Journal:  ACS Chem Biol       Date:  2014-06-19       Impact factor: 5.100

9.  A Peptidomimetic Fluorescent Probe to Detect the Trypsin β2 Subunit of the Human 20S Proteasome.

Authors:  Magdalena Wysocka; Anita Romanowska; Natalia Gruba; Michalina Michalska; Artur Giełdoń; Adam Lesner
Journal:  Int J Mol Sci       Date:  2020-03-31       Impact factor: 5.923

Review 10.  Site-Specific Proteasome Inhibitors.

Authors:  Alexei F Kisselev
Journal:  Biomolecules       Date:  2021-12-31
  10 in total

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