Literature DB >> 22102037

Crystallization and preliminary X-ray diffraction analysis of Sfh3, a member of the Sec14 protein superfamily.

Jihui Ren1, Gabriel Schaaf, Vytas A Bankaitis, Eric A Ortlund, Manish C Pathak.   

Abstract

Sec14 is the major phosphatidylinositol (PtdIns)/phosphatidylcholine (PtdCho) transfer protein in the yeast Saccharomyces cerevisiae and is the founding member of the Sec14 protein superfamily. Recent functional data suggest that Sec14 functions as a nanoreactor for PtdCho-regulated presentation of PtdIns to PtdIns kinase to affect membrane trafficking. Extrapolation of this concept to other members of the Sec14 superfamily suggests a mechanism by which a comprehensive cohort of Sec14-like nanoreactors sense correspondingly diverse pools of lipid metabolites. In turn, metabolic information is translated to signaling circuits driven by phosphoinositide metabolism. Sfh3, one of five Sec14 homologs in yeast, exhibits several interesting functional features, including its unique localization to lipid particles and microsomes. This localization forecasts novel regulatory interfaces between neutral lipid metabolism and phosphoinositide signaling. To launch a detailed structural and functional characterization of Sfh3, the recombinant protein was purified to homogeneity, diffraction-quality crystals were produced and a native X-ray data set was collected to 2.2 Å resolution. To aid in phasing, SAD X-ray diffraction data were collected to 1.93 Å resolution from an SeMet-labeled crystal at the Southeast Regional Collaborative Access Team at the Advanced Photon Source. Here, the cloning and purification of Sfh3 and the preliminary diffraction of Sfh3 crystals are reported, enabling structural analyses that are expected to reveal novel principles governing ligand binding and functional specificity for Sec14-superfamily proteins.
© 2011 International Union of Crystallography. All rights reserved.

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Year:  2011        PMID: 22102037      PMCID: PMC3212372          DOI: 10.1107/S1744309111027096

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  22 in total

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2.  Multiple sequence alignment with the Clustal series of programs.

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3.  An essential role for a phospholipid transfer protein in yeast Golgi function.

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Authors:  X Li; S M Routt; Z Xie; X Cui; M Fang; M A Kearns; M Bard; D R Kirsch; V A Bankaitis
Journal:  Mol Biol Cell       Date:  2000-06       Impact factor: 4.138

5.  Supernatant protein factor in complex with RRR-alpha-tocopherylquinone: a link between oxidized Vitamin E and cholesterol biosynthesis.

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7.  Activity of specific lipid-regulated ADP ribosylation factor-GTPase-activating proteins is required for Sec14p-dependent Golgi secretory function in yeast.

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9.  Selenomethionyl proteins produced for analysis by multiwavelength anomalous diffraction (MAD): a vehicle for direct determination of three-dimensional structure.

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10.  Overview of the CCP4 suite and current developments.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  3 in total

Review 1.  Thoughts on Sec14-like nanoreactors and phosphoinositide signaling.

Authors:  Vytas A Bankaitis; Kristina E Ile; Aaron H Nile; Jihui Ren; Ratna Ghosh; Gabriel Schaaf
Journal:  Adv Biol Regul       Date:  2012-02-16

2.  The signaling phospholipid PIP3 creates a new interaction surface on the nuclear receptor SF-1.

Authors:  Raymond D Blind; Elena P Sablin; Kristopher M Kuchenbecker; Hsiu-Ju Chiu; Ashley M Deacon; Debanu Das; Robert J Fletterick; Holly A Ingraham
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-06       Impact factor: 11.205

3.  A phosphatidylinositol transfer protein integrates phosphoinositide signaling with lipid droplet metabolism to regulate a developmental program of nutrient stress-induced membrane biogenesis.

Authors:  Jihui Ren; Coney Pei-Chen Lin; Manish C Pathak; Brenda R S Temple; Aaron H Nile; Carl J Mousley; Mara C Duncan; Debra M Eckert; Thomas J Leiker; Pavlina T Ivanova; David S Myers; Robert C Murphy; H Alex Brown; Jolien Verdaasdonk; Kerry S Bloom; Eric A Ortlund; Aaron M Neiman; Vytas A Bankaitis
Journal:  Mol Biol Cell       Date:  2014-01-08       Impact factor: 4.138

  3 in total

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