Literature DB >> 22100159

The control of HIV transcription: keeping RNA polymerase II on track.

Melanie Ott1, Matthias Geyer, Qiang Zhou.   

Abstract

Thirteen years ago, human cyclin T1 was identified as part of the positive transcription elongation factor b (P-TEFb) and the long-sought host cofactor for the HIV-1 transactivator Tat. Recent years have brought new insights into the intricate regulation of P-TEFb function and its relationship with Tat, revealing novel mechanisms for controlling HIV transcription and fueling new efforts to overcome the barrier of transcriptional latency in eradicating HIV. Moreover, the improved understanding of HIV and Tat forms a basis for studying transcription elongation control in general. Here, we review advances in HIV transcription research with a focus on the growing family of cellular P-TEFb complexes, structural insights into the interactions between Tat, P-TEFb, and TAR RNA, and the multifaceted regulation of these interactions by posttranscriptional modifications of Tat.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22100159      PMCID: PMC3478145          DOI: 10.1016/j.chom.2011.11.002

Source DB:  PubMed          Journal:  Cell Host Microbe        ISSN: 1931-3128            Impact factor:   21.023


  89 in total

Review 1.  Controlling the elongation phase of transcription with P-TEFb.

Authors:  B Matija Peterlin; David H Price
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

2.  The proteasome regulates HIV-1 transcription by both proteolytic and nonproteolytic mechanisms.

Authors:  Irina Lassot; Daniel Latreille; Emilie Rousset; Marion Sourisseau; Laetitia K Linares; Christine Chable-Bessia; Olivier Coux; Monsef Benkirane; Rosemary E Kiernan
Journal:  Mol Cell       Date:  2007-02-09       Impact factor: 17.970

3.  The SWI/SNF chromatin-remodeling complex is a cofactor for Tat transactivation of the HIV promoter.

Authors:  Tokameh Mahmoudi; Maribel Parra; Robert G J Vries; Steven E Kauder; C Peter Verrijzer; Melanie Ott; Eric Verdin
Journal:  J Biol Chem       Date:  2006-05-10       Impact factor: 5.157

4.  Cyclin-dependent kinase 9 (Cdk9) of fission yeast is activated by the CDK-activating kinase Csk1, overlaps functionally with the TFIIH-associated kinase Mcs6, and associates with the mRNA cap methyltransferase Pcm1 in vivo.

Authors:  Yi Pei; Hongyan Du; Juliet Singer; Courtney Stamour; Selena Granitto; Stewart Shuman; Robert P Fisher
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

5.  HIV-1 Tat is a natively unfolded protein: the solution conformation and dynamics of reduced HIV-1 Tat-(1-72) by NMR spectroscopy.

Authors:  Shaheen Shojania; Joe D O'Neil
Journal:  J Biol Chem       Date:  2006-01-19       Impact factor: 5.157

Review 6.  The Yin and Yang of P-TEFb regulation: implications for human immunodeficiency virus gene expression and global control of cell growth and differentiation.

Authors:  Qiang Zhou; Jasper H N Yik
Journal:  Microbiol Mol Biol Rev       Date:  2006-09       Impact factor: 11.056

7.  Arginine methylation of the human immunodeficiency virus type 1 Tat protein by PRMT6 negatively affects Tat Interactions with both cyclin T1 and the Tat transactivation region.

Authors:  Baode Xie; Cédric F Invernizzi; Stéphane Richard; Mark A Wainberg
Journal:  J Virol       Date:  2007-01-31       Impact factor: 5.103

8.  PRMT6 diminishes HIV-1 Rev binding to and export of viral RNA.

Authors:  Cédric F Invernizzi; Baode Xie; Stéphane Richard; Mark A Wainberg
Journal:  Retrovirology       Date:  2006-12-18       Impact factor: 4.602

9.  Phosphorylation of HIV-1 Tat by CDK2 in HIV-1 transcription.

Authors:  Tatyana Ammosova; Reem Berro; Marina Jerebtsova; Angela Jackson; Sharroya Charles; Zachary Klase; William Southerland; Victor R Gordeuk; Fatah Kashanchi; Sergei Nekhai
Journal:  Retrovirology       Date:  2006-11-03       Impact factor: 4.602

10.  Phosphorylation of HIV Tat by PKR increases interaction with TAR RNA and enhances transcription.

Authors:  Liliana Endo-Munoz; Tammra Warby; David Harrich; Nigel A J McMillan
Journal:  Virol J       Date:  2005-02-28       Impact factor: 4.099

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  136 in total

1.  Negative elongation factor (NELF) coordinates RNA polymerase II pausing, premature termination, and chromatin remodeling to regulate HIV transcription.

Authors:  Malini Natarajan; Gillian M Schiralli Lester; Chanhyo Lee; Anamika Missra; Gregory A Wasserman; Martin Steffen; David S Gilmour; Andrew J Henderson
Journal:  J Biol Chem       Date:  2013-07-24       Impact factor: 5.157

2.  HIV Tat controls RNA Polymerase II and the epigenetic landscape to transcriptionally reprogram target immune cells.

Authors:  Jonathan E Reeder; Youn-Tae Kwak; Ryan P McNamara; Christian V Forst; Iván D'Orso
Journal:  Elife       Date:  2015-10-21       Impact factor: 8.140

3.  A Minor Subset of Super Elongation Complexes Plays a Predominant Role in Reversing HIV-1 Latency.

Authors:  Zichong Li; Huasong Lu; Qiang Zhou
Journal:  Mol Cell Biol       Date:  2016-02-01       Impact factor: 4.272

4.  Transcriptional Elongation of HSV Immediate Early Genes by the Super Elongation Complex Drives Lytic Infection and Reactivation from Latency.

Authors:  Roberto Alfonso-Dunn; Anne-Marie W Turner; Pierre M Jean Beltran; Jesse H Arbuckle; Hanna G Budayeva; Ileana M Cristea; Thomas M Kristie
Journal:  Cell Host Microbe       Date:  2017-04-12       Impact factor: 21.023

Review 5.  HIV-1 transcription and latency: an update.

Authors:  Carine Van Lint; Sophie Bouchat; Alessandro Marcello
Journal:  Retrovirology       Date:  2013-06-26       Impact factor: 4.602

6.  Short communication: SAHA (vorinostat) induces CDK9 Thr-186 (T-loop) phosphorylation in resting CD4+ T cells: implications for reactivation of latent HIV.

Authors:  Rajesh Ramakrishnan; Hongbing Liu; Andrew P Rice
Journal:  AIDS Res Hum Retroviruses       Date:  2015-01       Impact factor: 2.205

7.  Visualization of positive transcription elongation factor b (P-TEFb) activation in living cells.

Authors:  Koh Fujinaga; Zeping Luo; Fred Schaufele; B Matija Peterlin
Journal:  J Biol Chem       Date:  2014-12-09       Impact factor: 5.157

8.  Histone deacetylase inhibitors (HDACis) that release the positive transcription elongation factor b (P-TEFb) from its inhibitory complex also activate HIV transcription.

Authors:  Koen Bartholomeeusen; Koh Fujinaga; Yanhui Xiang; B Matija Peterlin
Journal:  J Biol Chem       Date:  2013-03-28       Impact factor: 5.157

9.  Tat engagement of p38 MAP kinase and IRF7 pathways leads to activation of interferon-stimulated genes in antigen-presenting cells.

Authors:  Nayoung Kim; Sami Kukkonen; Maria Del Pilar Martinez-Viedma; Sumeet Gupta; Anna Aldovini
Journal:  Blood       Date:  2013-03-27       Impact factor: 22.113

10.  The CD8+ cell non-cytotoxic antiviral response affects RNA polymerase II-mediated human immunodeficiency virus transcription in infected CD4+ cells.

Authors:  Dalibor Blazek; Fernando Teque; Carl Mackewicz; Matija Peterlin; Jay A Levy
Journal:  J Gen Virol       Date:  2015-10-23       Impact factor: 3.891

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