Literature DB >> 22094114

Advances in Arachis genomics for peanut improvement.

Manish K Pandey1, Emmanuel Monyo, Peggy Ozias-Akins, Xuanquiang Liang, Patricia Guimarães, Shyam N Nigam, Hari D Upadhyaya, Pasupuleti Janila, Xinyou Zhang, Baozhu Guo, Douglas R Cook, David J Bertioli, Richard Michelmore, Rajeev K Varshney.   

Abstract

Peanut genomics is very challenging due to its inherent problem of genetic architecture. Blockage of gene flow from diploid wild relatives to the tetraploid; cultivated peanut, recent polyploidization combined with self pollination, and the narrow genetic base of the primary genepool have resulted in low genetic diversity that has remained a major bottleneck for genetic improvement of peanut. Harnessing the rich source of wild relatives has been negligible due to differences in ploidy level as well as genetic drag and undesirable alleles for low yield. Lack of appropriate genomic resources has severely hampered molecular breeding activities, and this crop remains among the less-studied crops. The last five years, however, have witnessed accelerated development of genomic resources such as development of molecular markers, genetic and physical maps, generation of expressed sequenced tags (ESTs), development of mutant resources, and functional genomics platforms that facilitate the identification of QTLs and discovery of genes associated with tolerance/resistance to abiotic and biotic stresses and agronomic traits. Molecular breeding has been initiated for several traits for development of superior genotypes. The genome or at least gene space sequence is expected to be available in near future and this will further accelerate use of biotechnological approaches for peanut improvement. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22094114     DOI: 10.1016/j.biotechadv.2011.11.001

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  81 in total

1.  Genetic imprints of domestication for disease resistance, oil quality, and yield component traits in groundnut (Arachis hypogaea L.).

Authors:  Pawan Khera; Manish K Pandey; Nalini Mallikarjuna; Manda Sriswathi; Manish Roorkiwal; Pasupuleti Janila; Shivali Sharma; Krishna Shilpa; Harikishan Sudini; Baozhu Guo; Rajeev K Varshney
Journal:  Mol Genet Genomics       Date:  2018-11-22       Impact factor: 3.291

2.  Sequence and expression analysis of putative Arachis hypogaea (peanut) Nod factor perception proteins.

Authors:  Fernando Ibáñez; Jorge Angelini; María Soledad Figueredo; Vanina Muñoz; María Laura Tonelli; Adriana Fabra
Journal:  J Plant Res       Date:  2015-03-24       Impact factor: 2.629

Review 3.  BSA‑seq and genetic mapping reveals AhRt2 as a candidate gene responsible for red testa of peanut.

Authors:  Kun Zhang; Mei Yuan; Han Xia; Liangqiong He; Jing Ma; Mingxiao Wang; Huiling Zhao; Lei Hou; Shuzhen Zhao; Pengcheng Li; Ruizheng Tian; Jiaowen Pan; Guanghui Li; Mahendar Thudi; Changle Ma; Xingjun Wang; Chuanzhi Zhao
Journal:  Theor Appl Genet       Date:  2022-02-15       Impact factor: 5.699

4.  Detection of a major QTL and development of KASP markers for seed weight by combining QTL-seq, QTL-mapping and RNA-seq in peanut.

Authors:  Zhihui Wang; Liying Yan; Yuning Chen; Xin Wang; Dongxin Huai; Yanping Kang; Huifang Jiang; Kede Liu; Yong Lei; Boshou Liao
Journal:  Theor Appl Genet       Date:  2022-03-09       Impact factor: 5.699

5.  Molecular marker development from transcript sequences and germplasm evaluation for cultivated peanut (Arachis hypogaea L.).

Authors:  Ze Peng; Maria Gallo; Barry L Tillman; Diane Rowland; Jianping Wang
Journal:  Mol Genet Genomics       Date:  2015-09-11       Impact factor: 3.291

Review 6.  Advances in genetics and molecular breeding of three legume crops of semi-arid tropics using next-generation sequencing and high-throughput genotyping technologies.

Authors:  Rajeev K Varshney; Himabindu Kudapa; Manish Roorkiwal; Mahendar Thudi; Manish K Pandey; Rachit K Saxena; Siva K Chamarthi; S Murali Mohan; Nalini Mallikarjuna; Hari Upadhyaya; Pooran M Gaur; L Krishnamurthy; K B Saxena; Shyam N Nigam; Suresh Pande
Journal:  J Biosci       Date:  2012-11       Impact factor: 1.826

7.  Genotyping-by-sequencing based genetic mapping reveals large number of epistatic interactions for stem rot resistance in groundnut.

Authors:  Sneha M Dodia; Binal Joshi; Sunil S Gangurde; Polavakkalipalayam P Thirumalaisamy; Gyan P Mishra; Dayama Narandrakumar; Pooja Soni; Arulthambi L Rathnakumar; Jentilal R Dobaria; Chandramohan Sangh; Annapurna Chitikineni; Sumitra V Chanda; Manish K Pandey; Rajeev K Varshney; Radhakrishnan Thankappan
Journal:  Theor Appl Genet       Date:  2018-12-11       Impact factor: 5.699

8.  Comparative mapping in intraspecific populations uncovers a high degree of macrosynteny between A- and B-genome diploid species of peanut.

Authors:  Yufang Guo; Sameer Khanal; Shunxue Tang; John E Bowers; Adam F Heesacker; Nelly Khalilian; Ervin D Nagy; Dong Zhang; Christopher A Taylor; H Thomas Stalker; Peggy Ozias-Akins; Steven J Knapp
Journal:  BMC Genomics       Date:  2012-11-10       Impact factor: 3.969

9.  A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut.

Authors:  Ervin D Nagy; Yufang Guo; Shunxue Tang; John E Bowers; Rebecca A Okashah; Christopher A Taylor; Dong Zhang; Sameer Khanal; Adam F Heesacker; Nelly Khalilian; Andrew D Farmer; Noelia Carrasquilla-Garcia; R Varma Penmetsa; Douglas Cook; H Thomas Stalker; Niels Nielsen; Peggy Ozias-Akins; Steven J Knapp
Journal:  BMC Genomics       Date:  2012-09-11       Impact factor: 3.969

10.  Global transcriptome analysis of two wild relatives of peanut under drought and fungi infection.

Authors:  Patricia M Guimarães; Ana C M Brasileiro; Carolina V Morgante; Andressa C Q Martins; Georgios Pappas; Orzenil B Silva; Roberto Togawa; Soraya C M Leal-Bertioli; Ana C G Araujo; Marcio C Moretzsohn; David J Bertioli
Journal:  BMC Genomics       Date:  2012-08-13       Impact factor: 3.969

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