Literature DB >> 22091176

4-[(Anthracen-9-yl-methyl-idene)amino]-1,5-dimethyl-2-phenyl-1H-pyrazol-3(2H)-one.

Abdullah M Asiri, Salman A Khan, M Nawaz Tahir.   

Abstract

In the title compound, C(26)H(21)N(3)O, the phenyl ring of the 4-amino-anti-n class="Chemical">pyrine group and the heterocyclic five-membered ring along with its substituents, except for the N-bound methyl group (r.m.s. deviation = 0.0027 Å), form a dihedral angle of 54.20 (5)°. Two S(6) ring motifs are formed due to intra-molecular C-H⋯N and C-H⋯O hydrogen bonds. In the crystal, mol-ecules are linked into supra-molecular chains along the a-axis direction via C-H⋯O contacts.

Entities:  

Year:  2011        PMID: 22091176      PMCID: PMC3213599          DOI: 10.1107/S1600536811029126

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to pyrazol-3-ones, see: Asiri & Khan (2010 ▶); Crane et al. (1985 ▶); Desai et al. (2010 ▶); Rai et al. (2009 ▶); Takagi et al. (1987 ▶); Yao et al. (2007 ▶); Zhang et al. (2005 ▶); For related crystal structures, see: Li & Zhang (2006 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C26H21N3O M = 391.46 Monoclinic, a = 7.6603 (3) Å b = 16.4549 (6) Å c = 15.8849 (6) Å β = 95.243 (1)° V = 1993.91 (13) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.32 × 0.24 × 0.22 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.975, T max = 0.980 14673 measured reflections 3593 independent reflections 2791 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.109 S = 1.06 3593 reflections 273 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811029126/tk2768sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811029126/tk2768Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811029126/tk2768Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H21N3OF(000) = 824
Mr = 391.46Dx = 1.304 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2791 reflections
a = 7.6603 (3) Åθ = 2.8–25.3°
b = 16.4549 (6) ŵ = 0.08 mm1
c = 15.8849 (6) ÅT = 296 K
β = 95.243 (1)°Prism, yellow
V = 1993.91 (13) Å30.32 × 0.24 × 0.22 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3593 independent reflections
Radiation source: fine-focus sealed tube2791 reflections with I > 2σ(I)
graphiteRint = 0.039
Detector resolution: 8.10 pixels mm-1θmax = 25.3°, θmin = 2.8°
ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −19→19
Tmin = 0.975, Tmax = 0.980l = −19→19
14673 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0463P)2 + 0.4551P] where P = (Fo2 + 2Fc2)/3
3593 reflections(Δ/σ)max < 0.001
273 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.30051 (14)0.39403 (7)0.06517 (7)0.0520 (4)
N10.56061 (17)0.42547 (8)0.22734 (8)0.0409 (4)
N20.74133 (15)0.37942 (7)0.03382 (7)0.0359 (4)
N30.56279 (15)0.38171 (8)0.00463 (8)0.0383 (4)
C10.46213 (19)0.39626 (9)0.07155 (9)0.0367 (5)
C20.58906 (19)0.41001 (9)0.14336 (9)0.0359 (5)
C30.75240 (19)0.40245 (8)0.11629 (9)0.0348 (5)
C40.9234 (2)0.42095 (10)0.16435 (10)0.0465 (6)
C50.8631 (2)0.40778 (10)−0.02533 (10)0.0441 (5)
C60.50243 (18)0.34201 (9)−0.07195 (9)0.0352 (5)
C70.5734 (2)0.26909 (10)−0.09414 (10)0.0460 (5)
C80.5114 (3)0.23253 (12)−0.16899 (12)0.0600 (7)
C90.3794 (3)0.26782 (13)−0.22057 (12)0.0624 (7)
C100.3093 (3)0.34023 (12)−0.19815 (11)0.0574 (6)
C110.3707 (2)0.37817 (10)−0.12373 (10)0.0457 (5)
C120.4106 (2)0.44921 (10)0.24467 (10)0.0442 (5)
C130.36155 (19)0.46454 (9)0.33093 (9)0.0396 (5)
C140.40579 (19)0.41027 (9)0.39838 (9)0.0391 (5)
C150.5113 (2)0.33949 (10)0.39171 (11)0.0461 (6)
C160.5522 (2)0.29004 (11)0.45886 (11)0.0527 (6)
C170.4888 (2)0.30582 (12)0.53761 (11)0.0551 (7)
C180.3861 (2)0.37129 (11)0.54708 (10)0.0511 (6)
C190.3405 (2)0.42567 (10)0.47887 (10)0.0427 (5)
C200.2374 (2)0.49383 (10)0.48880 (11)0.0477 (5)
C210.1963 (2)0.54873 (10)0.42364 (11)0.0455 (5)
C220.0966 (2)0.62024 (11)0.43539 (13)0.0570 (7)
C230.0667 (3)0.67545 (12)0.37312 (15)0.0661 (7)
C240.1354 (3)0.66362 (12)0.29507 (14)0.0648 (7)
C250.2282 (2)0.59577 (11)0.28014 (12)0.0542 (6)
C260.2605 (2)0.53462 (10)0.34333 (10)0.0423 (5)
H4A1.007010.379710.153370.0698*
H4B0.908840.422240.223730.0698*
H4C0.964750.472840.147000.0698*
H5A0.835780.46297−0.041080.0661*
H5B0.852810.37406−0.074850.0661*
H5C0.980790.404950.001060.0661*
H70.662110.24477−0.058980.0552*
H80.559520.18352−0.184660.0720*
H90.337560.24253−0.270770.0749*
H100.219730.36406−0.233220.0689*
H110.323630.42763−0.108740.0548*
H120.325520.457540.199880.0530*
H150.552910.327000.340060.0554*
H160.623320.245000.452780.0632*
H170.517570.271220.583060.0661*
H180.344310.381080.599280.0614*
H200.194510.503000.540880.0572*
H220.051300.628970.486990.0683*
H230.000310.721510.381850.0793*
H240.117110.702850.253060.0778*
H250.271460.588960.227780.0650*
U11U22U33U12U13U23
O10.0282 (6)0.0734 (8)0.0544 (7)0.0007 (5)0.0042 (5)−0.0123 (6)
N10.0352 (7)0.0483 (8)0.0397 (7)−0.0023 (6)0.0060 (5)−0.0023 (6)
N20.0254 (6)0.0435 (7)0.0390 (7)−0.0014 (5)0.0037 (5)−0.0011 (5)
N30.0274 (7)0.0475 (8)0.0399 (7)−0.0002 (5)0.0020 (5)−0.0062 (5)
C10.0292 (8)0.0389 (9)0.0425 (8)−0.0003 (6)0.0054 (6)−0.0030 (6)
C20.0323 (8)0.0381 (8)0.0376 (8)−0.0003 (6)0.0050 (6)−0.0008 (6)
C30.0317 (8)0.0339 (8)0.0386 (8)−0.0001 (6)0.0024 (6)0.0032 (6)
C40.0322 (9)0.0613 (11)0.0454 (9)−0.0030 (7)−0.0004 (7)0.0024 (8)
C50.0355 (9)0.0536 (10)0.0442 (9)−0.0064 (7)0.0099 (7)0.0016 (7)
C60.0308 (8)0.0383 (8)0.0368 (8)−0.0049 (6)0.0042 (6)0.0000 (6)
C70.0417 (9)0.0468 (9)0.0483 (9)0.0043 (7)−0.0025 (7)−0.0027 (7)
C80.0597 (12)0.0573 (11)0.0612 (11)0.0043 (9)−0.0037 (9)−0.0193 (9)
C90.0607 (12)0.0750 (14)0.0493 (11)−0.0072 (10)−0.0068 (9)−0.0173 (9)
C100.0524 (11)0.0669 (12)0.0500 (10)0.0003 (9)−0.0115 (8)0.0050 (9)
C110.0429 (9)0.0444 (9)0.0488 (10)0.0022 (7)−0.0009 (7)0.0019 (7)
C120.0365 (9)0.0544 (10)0.0413 (9)0.0018 (7)0.0014 (7)−0.0063 (7)
C130.0305 (8)0.0477 (9)0.0410 (8)−0.0048 (7)0.0049 (6)−0.0077 (7)
C140.0310 (8)0.0445 (9)0.0420 (8)−0.0087 (7)0.0043 (6)−0.0078 (7)
C150.0422 (10)0.0484 (10)0.0481 (9)−0.0030 (7)0.0056 (7)−0.0069 (7)
C160.0457 (10)0.0494 (10)0.0623 (11)−0.0039 (8)0.0010 (8)0.0002 (8)
C170.0486 (11)0.0597 (12)0.0555 (11)−0.0140 (9)−0.0029 (8)0.0105 (9)
C180.0471 (10)0.0657 (12)0.0410 (9)−0.0189 (9)0.0064 (7)−0.0024 (8)
C190.0352 (9)0.0499 (10)0.0436 (9)−0.0138 (7)0.0063 (7)−0.0070 (7)
C200.0398 (9)0.0580 (10)0.0477 (9)−0.0128 (8)0.0173 (7)−0.0150 (8)
C210.0317 (8)0.0487 (10)0.0572 (10)−0.0086 (7)0.0109 (7)−0.0131 (8)
C220.0396 (10)0.0558 (11)0.0774 (13)−0.0030 (8)0.0159 (9)−0.0201 (10)
C230.0450 (11)0.0522 (11)0.1008 (16)0.0055 (9)0.0058 (10)−0.0150 (11)
C240.0511 (12)0.0590 (12)0.0829 (14)0.0060 (9)−0.0016 (10)0.0047 (10)
C250.0443 (10)0.0623 (11)0.0554 (10)0.0036 (8)0.0015 (8)−0.0019 (9)
C260.0295 (8)0.0487 (9)0.0489 (9)−0.0042 (7)0.0041 (7)−0.0081 (7)
O1—C11.2335 (18)C21—C221.424 (2)
N1—C21.3946 (19)C21—C261.428 (2)
N1—C121.268 (2)C22—C231.347 (3)
N2—N31.4039 (16)C23—C241.404 (3)
N2—C31.3589 (18)C24—C251.356 (3)
N2—C51.4598 (19)C25—C261.427 (2)
N3—C11.3899 (19)C4—H4A0.9600
N3—C61.4204 (19)C4—H4B0.9600
C1—C21.447 (2)C4—H4C0.9600
C2—C31.365 (2)C5—H5A0.9600
C3—C41.486 (2)C5—H5B0.9600
C6—C71.376 (2)C5—H5C0.9600
C6—C111.377 (2)C7—H70.9300
C7—C81.378 (3)C8—H80.9300
C8—C91.371 (3)C9—H90.9300
C9—C101.367 (3)C10—H100.9300
C10—C111.381 (2)C11—H110.9300
C12—C131.475 (2)C12—H120.9300
C13—C141.412 (2)C15—H150.9300
C13—C261.413 (2)C16—H160.9300
C14—C151.427 (2)C17—H170.9300
C14—C191.437 (2)C18—H180.9300
C15—C161.355 (2)C20—H200.9300
C16—C171.407 (2)C22—H220.9300
C17—C181.351 (3)C23—H230.9300
C18—C191.424 (2)C24—H240.9300
C19—C201.389 (2)C25—H250.9300
C20—C211.388 (2)
C2—N1—C12119.21 (13)C13—C26—C21119.69 (14)
N3—N2—C3106.50 (11)C13—C26—C25122.66 (14)
N3—N2—C5116.06 (11)C21—C26—C25117.53 (15)
C3—N2—C5122.96 (12)C3—C4—H4A109.00
N2—N3—C1110.11 (11)C3—C4—H4B109.00
N2—N3—C6120.10 (11)C3—C4—H4C109.00
C1—N3—C6125.05 (12)H4A—C4—H4B109.00
O1—C1—N3123.70 (13)H4A—C4—H4C109.00
O1—C1—C2131.78 (14)H4B—C4—H4C109.00
N3—C1—C2104.48 (12)N2—C5—H5A109.00
N1—C2—C1129.04 (13)N2—C5—H5B109.00
N1—C2—C3123.07 (13)N2—C5—H5C109.00
C1—C2—C3107.85 (13)H5A—C5—H5B109.00
N2—C3—C2110.53 (13)H5A—C5—H5C109.00
N2—C3—C4121.79 (13)H5B—C5—H5C109.00
C2—C3—C4127.56 (13)C6—C7—H7120.00
N3—C6—C7121.00 (13)C8—C7—H7120.00
N3—C6—C11118.43 (13)C7—C8—H8120.00
C7—C6—C11120.57 (14)C9—C8—H8120.00
C6—C7—C8119.25 (15)C8—C9—H9120.00
C7—C8—C9120.54 (18)C10—C9—H9120.00
C8—C9—C10119.95 (18)C9—C10—H10120.00
C9—C10—C11120.38 (18)C11—C10—H10120.00
C6—C11—C10119.31 (16)C6—C11—H11120.00
N1—C12—C13124.56 (14)C10—C11—H11120.00
C12—C13—C14122.19 (13)N1—C12—H12118.00
C12—C13—C26117.28 (13)C13—C12—H12118.00
C14—C13—C26120.47 (13)C14—C15—H15119.00
C13—C14—C15123.92 (14)C16—C15—H15119.00
C13—C14—C19118.98 (13)C15—C16—H16119.00
C15—C14—C19117.09 (14)C17—C16—H16120.00
C14—C15—C16121.55 (15)C16—C17—H17120.00
C15—C16—C17121.01 (16)C18—C17—H17120.00
C16—C17—C18119.88 (16)C17—C18—H18119.00
C17—C18—C19121.43 (15)C19—C18—H18119.00
C14—C19—C18119.01 (14)C19—C20—H20119.00
C14—C19—C20119.41 (15)C21—C20—H20119.00
C18—C19—C20121.57 (15)C21—C22—H22119.00
C19—C20—C21122.23 (15)C23—C22—H22119.00
C20—C21—C22121.85 (16)C22—C23—H23120.00
C20—C21—C26119.16 (15)C24—C23—H23120.00
C22—C21—C26118.95 (16)C23—C24—H24120.00
C21—C22—C23121.21 (18)C25—C24—H24120.00
C22—C23—C24120.17 (19)C24—C25—H25119.00
C23—C24—C25120.89 (19)C26—C25—H25119.00
C24—C25—C26121.17 (17)
C12—N1—C2—C1−17.9 (2)N1—C12—C13—C26137.66 (17)
C12—N1—C2—C3164.62 (15)C12—C13—C14—C154.7 (2)
C2—N1—C12—C13177.51 (14)C12—C13—C14—C19−174.64 (14)
C3—N2—N3—C1−7.39 (15)C26—C13—C14—C15−178.17 (15)
C3—N2—N3—C6−164.20 (12)C26—C13—C14—C192.5 (2)
C5—N2—N3—C1−148.34 (13)C12—C13—C26—C21174.53 (14)
C5—N2—N3—C654.85 (17)C12—C13—C26—C25−9.7 (2)
N3—N2—C3—C27.04 (15)C14—C13—C26—C21−2.8 (2)
N3—N2—C3—C4−169.32 (13)C14—C13—C26—C25173.05 (15)
C5—N2—C3—C2144.62 (13)C13—C14—C15—C16178.95 (15)
C5—N2—C3—C4−31.7 (2)C19—C14—C15—C16−1.7 (2)
N2—N3—C1—O1−173.21 (14)C13—C14—C19—C18−179.55 (14)
N2—N3—C1—C24.81 (16)C13—C14—C19—C20−0.7 (2)
C6—N3—C1—O1−17.8 (2)C15—C14—C19—C181.1 (2)
C6—N3—C1—C2160.23 (13)C15—C14—C19—C20179.89 (15)
N2—N3—C6—C736.9 (2)C14—C15—C16—C171.3 (2)
N2—N3—C6—C11−143.11 (14)C15—C16—C17—C18−0.3 (3)
C1—N3—C6—C7−116.22 (17)C16—C17—C18—C19−0.4 (3)
C1—N3—C6—C1163.7 (2)C17—C18—C19—C14−0.1 (2)
O1—C1—C2—N1−0.5 (3)C17—C18—C19—C20−178.87 (16)
O1—C1—C2—C3177.30 (16)C14—C19—C20—C21−0.8 (2)
N3—C1—C2—N1−178.28 (15)C18—C19—C20—C21177.99 (15)
N3—C1—C2—C3−0.50 (16)C19—C20—C21—C22−177.33 (15)
N1—C2—C3—N2173.80 (13)C19—C20—C21—C260.6 (2)
N1—C2—C3—C4−10.1 (2)C20—C21—C22—C23175.93 (18)
C1—C2—C3—N2−4.15 (16)C26—C21—C22—C23−2.0 (3)
C1—C2—C3—C4171.95 (14)C20—C21—C26—C131.2 (2)
N3—C6—C7—C8−179.94 (16)C20—C21—C26—C25−174.80 (15)
C11—C6—C7—C80.1 (2)C22—C21—C26—C13179.17 (15)
N3—C6—C11—C10−179.52 (15)C22—C21—C26—C253.2 (2)
C7—C6—C11—C100.4 (2)C21—C22—C23—C24−0.6 (3)
C6—C7—C8—C9−0.6 (3)C22—C23—C24—C251.9 (3)
C7—C8—C9—C100.6 (3)C23—C24—C25—C26−0.6 (3)
C8—C9—C10—C110.0 (3)C24—C25—C26—C13−177.82 (17)
C9—C10—C11—C6−0.5 (3)C24—C25—C26—C21−1.9 (2)
N1—C12—C13—C14−45.1 (2)
D—H···AD—HH···AD···AD—H···A
C5—H5a···O1i0.962.593.530 (2)167
C5—H5c···O1ii0.962.573.5305 (19)177
C12—H12···O10.932.373.0375 (19)128
C15—H15···N10.932.423.024 (2)123
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5a⋯O1i0.962.593.530 (2)167
C5—H5c⋯O1ii0.962.573.5305 (19)177
C12—H12⋯O10.932.373.0375 (19)128
C15—H15⋯N10.932.423.024 (2)123

Symmetry codes: (i) ; (ii) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, characterization and antibacterial activity of 2-[1-(5-chloro-2-methoxy-phenyl)-5-methyl-1H-pyrazol-4-yl]-5-(substituted-phenyl)-[1,3,4]oxadiazoles.

Authors:  Neithnadka Premsai Rai; Venugopala Katharigatta Narayanaswamy; Sheena Shashikanth; Pirama Nayagam Arunachalam
Journal:  Eur J Med Chem       Date:  2009-06-26       Impact factor: 6.514

Review 3.  Transplasma-membrane redox systems in growth and development.

Authors:  F L Crane; I L Sun; M G Clark; C Grebing; H Löw
Journal:  Biochim Biophys Acta       Date:  1985-08-01

4.  Synthesis, crystal structure, cytotoxic activity and DNA-binding properties of the copper (II) and zinc (II) complexes with 1-[3-(2-pyridyl)pyrazol-1-ylmethyl]naphthalene.

Authors:  Hang Zhang; Chun-Sen Liu; Xian-He Bu; Ming Yang
Journal:  J Inorg Biochem       Date:  2005-05       Impact factor: 4.155

5.  Synthesis and evaluation of the anti-inflammatory properties of selenium-derivatives of celecoxib.

Authors:  Dhimant Desai; Naveen Kaushal; Ujjawal H Gandhi; Ryan J Arner; Christopher D'Souza; Gang Chen; Hema Vunta; Karam El-Bayoumy; Shantu Amin; K Sandeep Prabhu
Journal:  Chem Biol Interact       Date:  2010-09-29       Impact factor: 5.192

6.  Synthesis and anti-bacterial activities of some novel Schiff bases derived from aminophenazone.

Authors:  Abdullah M Asiri; Salman A Khan
Journal:  Molecules       Date:  2010-10-08       Impact factor: 4.411

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  1 in total

1.  N-[(E)-Anthracen-9-yl-methyl-idene]-3,4-dimethyl-1,2-oxazol-5-amine.

Authors:  Abdullah M Asiri; Abdulrahman O Al-Youbi; Salman A Khan; M Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-30
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.