| Literature DB >> 22091123 |
Jie Han, Jun Zhang, Qi Yang, Ming-Gao Zhao, Guang Fan.
Abstract
The title compound, C(9)H(9)ClN(2), was prepared from the reaction of N-methyl-benzene-1,2-diamine and 2-chloro-acetic acid in boiling 6 M hydro-chloric acid. The benzimidazole unit is approximately planar, the largest deviation from the mean plane being 0.008 (1) Å. The Cl atom is displaced by 1.667 (2) Å from this plane. The methyl group is statistically disordered with equal occupancy.Entities:
Year: 2011 PMID: 22091123 PMCID: PMC3213546 DOI: 10.1107/S1600536811028376
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H9ClN2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2191 reflections | |
| θ = 2.3–25.1° | |
| µ = 0.38 mm−1 | |
| α = 84.566 (3)° | |
| β = 79.682 (4)° | Block, white |
| γ = 68.134 (4)° | 0.37 × 0.29 × 0.18 mm |
| Bruker SMART APEX CCD diffractometer | 1523 independent reflections |
| Radiation source: fine-focus sealed tube | 1361 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 2191 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1523 reflections | (Δ/σ)max < 0.001 |
| 109 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | 0.2259 (4) | 0.4372 (3) | 0.6995 (2) | 0.0610 (6) | |
| H1A | 0.3424 | 0.4781 | 0.7109 | 0.073* | |
| H1B | 0.0985 | 0.5393 | 0.6790 | 0.073* | |
| C2 | 0.1665 (3) | 0.3458 (2) | 0.8432 (2) | 0.0498 (5) | |
| C3 | −0.2214 (4) | 0.3954 (3) | 0.8004 (3) | 0.0666 (6) | |
| H3A | −0.3405 | 0.3638 | 0.8563 | 0.100* | 0.50 |
| H3B | −0.1788 | 0.3444 | 0.7017 | 0.100* | 0.50 |
| H3C | −0.2683 | 0.5215 | 0.7888 | 0.100* | 0.50 |
| H3D | −0.1846 | 0.4560 | 0.7082 | 0.100* | 0.50 |
| H3E | −0.3463 | 0.4754 | 0.8628 | 0.100* | 0.50 |
| H3F | −0.2568 | 0.2983 | 0.7757 | 0.100* | 0.50 |
| C4 | −0.0294 (3) | 0.2393 (2) | 1.0212 (2) | 0.0488 (5) | |
| C5 | −0.1859 (4) | 0.1843 (3) | 1.1144 (3) | 0.0600 (6) | |
| H5 | −0.3242 | 0.2069 | 1.0885 | 0.072* | |
| C6 | −0.1250 (4) | 0.0947 (3) | 1.2471 (3) | 0.0675 (6) | |
| H6 | −0.2258 | 0.0574 | 1.3137 | 0.081* | |
| C7 | 0.0842 (4) | 0.0581 (3) | 1.2848 (3) | 0.0673 (6) | |
| H7 | 0.1198 | −0.0041 | 1.3751 | 0.081* | |
| C8 | 0.2384 (4) | 0.1119 (3) | 1.1915 (2) | 0.0605 (6) | |
| H8 | 0.3773 | 0.0871 | 1.2173 | 0.073* | |
| C9 | 0.1803 (3) | 0.2046 (2) | 1.0572 (2) | 0.0495 (5) | |
| Cl1 | 0.31643 (17) | 0.29247 (10) | 0.54306 (8) | 0.1088 (4) | |
| N1 | 0.3008 (3) | 0.2749 (2) | 0.94299 (19) | 0.0535 (4) | |
| N2 | −0.0342 (3) | 0.3294 (2) | 0.88264 (18) | 0.0498 (4) |
| C1 | 0.0686 (13) | 0.0587 (12) | 0.0545 (12) | −0.0238 (11) | −0.0075 (10) | 0.0029 (10) |
| C2 | 0.0509 (11) | 0.0472 (10) | 0.0489 (11) | −0.0161 (8) | −0.0037 (8) | −0.0048 (8) |
| C3 | 0.0599 (13) | 0.0680 (14) | 0.0736 (15) | −0.0195 (11) | −0.0252 (11) | 0.0030 (11) |
| C4 | 0.0505 (10) | 0.0436 (10) | 0.0495 (11) | −0.0146 (8) | −0.0031 (8) | −0.0077 (8) |
| C5 | 0.0550 (12) | 0.0568 (12) | 0.0676 (14) | −0.0235 (10) | 0.0018 (10) | −0.0068 (10) |
| C6 | 0.0741 (15) | 0.0634 (13) | 0.0630 (14) | −0.0314 (12) | 0.0101 (11) | −0.0041 (11) |
| C7 | 0.0840 (16) | 0.0602 (13) | 0.0512 (12) | −0.0235 (12) | −0.0033 (11) | 0.0048 (10) |
| C8 | 0.0609 (13) | 0.0639 (13) | 0.0540 (12) | −0.0198 (10) | −0.0100 (10) | 0.0006 (10) |
| C9 | 0.0513 (11) | 0.0483 (10) | 0.0474 (10) | −0.0173 (9) | −0.0040 (8) | −0.0042 (8) |
| Cl1 | 0.1675 (9) | 0.0837 (5) | 0.0523 (4) | −0.0326 (5) | 0.0147 (4) | −0.0069 (3) |
| N1 | 0.0494 (9) | 0.0588 (10) | 0.0518 (10) | −0.0203 (8) | −0.0065 (7) | 0.0006 (8) |
| N2 | 0.0465 (9) | 0.0509 (9) | 0.0520 (9) | −0.0170 (7) | −0.0082 (7) | −0.0028 (7) |
| C1—C2 | 1.488 (3) | C4—N2 | 1.377 (3) |
| C1—Cl1 | 1.786 (2) | C4—C5 | 1.389 (3) |
| C1—H1A | 0.9700 | C4—C9 | 1.398 (3) |
| C1—H1B | 0.9700 | C5—C6 | 1.373 (3) |
| C2—N1 | 1.310 (3) | C5—H5 | 0.9300 |
| C2—N2 | 1.363 (3) | C6—C7 | 1.397 (4) |
| C3—N2 | 1.453 (3) | C6—H6 | 0.9300 |
| C3—H3A | 0.9600 | C7—C8 | 1.373 (3) |
| C3—H3B | 0.9600 | C7—H7 | 0.9300 |
| C3—H3C | 0.9600 | C8—C9 | 1.390 (3) |
| C3—H3D | 0.9600 | C8—H8 | 0.9300 |
| C3—H3E | 0.9600 | C9—N1 | 1.393 (3) |
| C3—H3F | 0.9600 | ||
| C2—C1—Cl1 | 110.86 (15) | H3B—C3—H3F | 56.3 |
| C2—C1—H1A | 109.5 | H3C—C3—H3F | 141.1 |
| Cl1—C1—H1A | 109.5 | H3D—C3—H3F | 109.5 |
| C2—C1—H1B | 109.5 | H3E—C3—H3F | 109.5 |
| Cl1—C1—H1B | 109.5 | N2—C4—C5 | 131.59 (19) |
| H1A—C1—H1B | 108.1 | N2—C4—C9 | 105.69 (17) |
| N1—C2—N2 | 114.14 (18) | C5—C4—C9 | 122.71 (19) |
| N1—C2—C1 | 123.36 (19) | C6—C5—C4 | 116.3 (2) |
| N2—C2—C1 | 122.49 (18) | C6—C5—H5 | 121.9 |
| N2—C3—H3A | 109.5 | C4—C5—H5 | 121.9 |
| N2—C3—H3B | 109.5 | C5—C6—C7 | 121.9 (2) |
| H3A—C3—H3B | 109.5 | C5—C6—H6 | 119.1 |
| N2—C3—H3C | 109.5 | C7—C6—H6 | 119.1 |
| H3A—C3—H3C | 109.5 | C8—C7—C6 | 121.5 (2) |
| H3B—C3—H3C | 109.5 | C8—C7—H7 | 119.3 |
| N2—C3—H3D | 109.5 | C6—C7—H7 | 119.3 |
| H3A—C3—H3D | 141.1 | C7—C8—C9 | 117.9 (2) |
| H3B—C3—H3D | 56.3 | C7—C8—H8 | 121.1 |
| H3C—C3—H3D | 56.3 | C9—C8—H8 | 121.1 |
| N2—C3—H3E | 109.5 | C8—C9—N1 | 130.36 (19) |
| H3A—C3—H3E | 56.3 | C8—C9—C4 | 119.77 (19) |
| H3B—C3—H3E | 141.1 | N1—C9—C4 | 109.87 (17) |
| H3C—C3—H3E | 56.3 | C2—N1—C9 | 104.17 (16) |
| H3D—C3—H3E | 109.5 | C2—N2—C4 | 106.13 (16) |
| N2—C3—H3F | 109.5 | C2—N2—C3 | 128.34 (18) |
| H3A—C3—H3F | 56.3 | C4—N2—C3 | 125.52 (17) |