Literature DB >> 22091065

5-(Pyridin-2-yl)-3,3'-bi(1H-1,2,4-triazole).

Zhouqing Xu, Xinping Zhao, Qiang Wang.   

Abstract

In the title mol-ecule, C(9)H(7)N(7), the two n class="Chemical">triazole rings are twisted by an angle of 3.8 (5)°; the central triazole ring is twisted by 32.3 (6)° with respect to the pyridyl ring. The crystal packing consists of layers generated by inter-molecular N-H⋯N hydrogen bonds.

Entities:  

Year:  2011        PMID: 22091065      PMCID: PMC3213486          DOI: 10.1107/S1600536811027449

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Mai et al. (2009 ▶); Zhang et al. (2010 ▶). For the synthesis, see: Potts (1960 ▶); Wiley & Hart (1953 ▶).

Experimental

Crystal data

C9H7N7 M = 213.22 Monoclinic, a = 12.372 (3) Å b = 7.5361 (15) Å c = 10.007 (2) Å β = 93.670 (4)° V = 931.1 (3) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 296 K 0.24 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.975, T max = 0.979 5150 measured reflections 1832 independent reflections 1072 reflections with I > 2σ(I) R int = 0.055

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.156 S = 0.94 1832 reflections 154 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811027449/ng5195sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811027449/ng5195Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811027449/ng5195Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H7N7F(000) = 440
Mr = 213.22Dx = 1.521 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 12.372 (3) ÅCell parameters from 6322 reflections
b = 7.5361 (15) Åθ = 2.0–27.9°
c = 10.007 (2) ŵ = 0.11 mm1
β = 93.670 (4)°T = 296 K
V = 931.1 (3) Å3Block, colourless
Z = 40.24 × 0.20 × 0.20 mm
Bruker SMART APEX diffractometer1832 independent reflections
Radiation source: fine-focus sealed tube1072 reflections with I > 2σ(I)
graphiteRint = 0.055
ω scanθmax = 26.0°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −15→12
Tmin = 0.975, Tmax = 0.979k = −9→9
5150 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.156w = 1/[σ2(Fo2) + (0.0843P)2] where P = (Fo2 + 2Fc2)/3
S = 0.94(Δ/σ)max < 0.001
1832 reflectionsΔρmax = 0.26 e Å3
154 parametersΔρmin = −0.22 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.018 (5)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N40.22980 (16)0.2080 (3)0.46400 (19)0.0342 (6)
N60.23958 (18)0.2161 (3)0.6818 (2)0.0370 (6)
N20.07056 (18)−0.2247 (3)0.2744 (2)0.0394 (6)
N30.06963 (16)−0.2067 (3)0.4914 (2)0.0367 (6)
N50.18243 (17)0.0672 (3)0.6502 (2)0.0372 (6)
C10.1252 (2)−0.0720 (3)0.4381 (2)0.0311 (6)
N10.12802 (17)−0.0763 (3)0.3067 (2)0.0387 (6)
C20.26642 (19)0.2993 (3)0.5708 (2)0.0329 (6)
C30.1792 (2)0.0682 (3)0.5182 (2)0.0324 (6)
C40.0376 (2)−0.2994 (3)0.3838 (3)0.0388 (7)
H4−0.0028−0.40340.38510.047*
N70.40073 (18)0.4877 (3)0.6744 (2)0.0446 (6)
C50.4476 (2)0.7649 (4)0.5774 (3)0.0543 (8)
H50.49000.86690.58280.065*
C60.3285 (2)0.4650 (3)0.5701 (2)0.0343 (6)
C70.3123 (2)0.5856 (3)0.4680 (3)0.0417 (7)
H70.26200.56360.39690.050*
C80.3724 (2)0.7401 (4)0.4729 (3)0.0531 (8)
H80.36180.82570.40640.064*
C90.4592 (2)0.6366 (4)0.6738 (3)0.0547 (8)
H90.51130.65430.74370.066*
H10.249 (2)0.252 (4)0.776 (4)0.088 (11)*
H20.062 (2)−0.262 (4)0.179 (3)0.081 (11)*
U11U22U33U12U13U23
N40.0456 (13)0.0338 (12)0.0232 (11)0.0004 (10)0.0025 (9)−0.0019 (9)
N60.0522 (14)0.0363 (13)0.0222 (12)−0.0021 (11)0.0009 (10)−0.0032 (10)
N20.0552 (15)0.0364 (13)0.0262 (13)0.0000 (11)−0.0009 (10)−0.0045 (10)
N30.0461 (13)0.0346 (13)0.0291 (12)−0.0022 (10)−0.0010 (10)0.0007 (9)
N50.0483 (14)0.0354 (13)0.0276 (12)−0.0030 (10)−0.0001 (10)−0.0029 (9)
C10.0411 (15)0.0302 (14)0.0220 (13)0.0052 (11)0.0015 (11)0.0005 (11)
N10.0539 (15)0.0371 (13)0.0248 (12)−0.0014 (11)0.0011 (10)−0.0023 (9)
C20.0402 (15)0.0325 (15)0.0257 (14)0.0036 (12)0.0003 (11)−0.0006 (11)
C30.0422 (15)0.0304 (14)0.0246 (13)0.0019 (11)0.0022 (11)−0.0009 (11)
C40.0485 (17)0.0348 (15)0.0329 (15)0.0001 (12)−0.0002 (12)−0.0018 (12)
N70.0514 (14)0.0434 (14)0.0379 (14)−0.0093 (12)−0.0042 (11)−0.0014 (11)
C50.061 (2)0.0467 (19)0.056 (2)−0.0133 (15)0.0099 (16)−0.0040 (16)
C60.0399 (15)0.0334 (15)0.0299 (14)0.0039 (12)0.0041 (11)−0.0020 (11)
C70.0461 (17)0.0409 (16)0.0380 (16)0.0001 (13)0.0017 (12)0.0001 (13)
C80.057 (2)0.0426 (17)0.060 (2)0.0022 (15)0.0098 (16)0.0114 (16)
C90.057 (2)0.058 (2)0.0487 (19)−0.0165 (16)−0.0029 (15)−0.0037 (16)
N4—C21.326 (3)C2—C61.467 (3)
N4—C31.356 (3)C4—H40.9300
N6—C21.336 (3)N7—C91.336 (3)
N6—N51.353 (3)N7—C61.341 (3)
N6—H10.98 (4)C5—C91.366 (4)
N2—C41.319 (3)C5—C81.368 (4)
N2—N11.353 (3)C5—H50.9300
N2—H20.99 (3)C6—C71.372 (4)
N3—C41.322 (3)C7—C81.380 (4)
N3—C11.354 (3)C7—H70.9300
N5—C31.319 (3)C8—H80.9300
C1—N11.318 (3)C9—H90.9300
C1—C31.461 (3)
C2—N4—C3102.9 (2)N2—C4—N3111.0 (2)
C2—N6—N5110.4 (2)N2—C4—H4124.5
C2—N6—H1131 (2)N3—C4—H4124.5
N5—N6—H1119 (2)C9—N7—C6115.9 (2)
C4—N2—N1109.8 (2)C9—C5—C8118.6 (3)
C4—N2—H2131.2 (19)C9—C5—H5120.7
N1—N2—H2118.9 (19)C8—C5—H5120.7
C4—N3—C1102.0 (2)N7—C6—C7123.6 (2)
C3—N5—N6102.2 (2)N7—C6—C2115.3 (2)
N1—C1—N3114.9 (2)C7—C6—C2121.1 (2)
N1—C1—C3121.6 (2)C6—C7—C8118.7 (3)
N3—C1—C3123.5 (2)C6—C7—H7120.7
C1—N1—N2102.3 (2)C8—C7—H7120.7
N4—C2—N6109.7 (2)C5—C8—C7118.7 (3)
N4—C2—C6126.1 (2)C5—C8—H8120.6
N6—C2—C6124.2 (2)C7—C8—H8120.6
N5—C3—N4114.8 (2)N7—C9—C5124.5 (3)
N5—C3—C1121.9 (2)N7—C9—H9117.8
N4—C3—C1123.3 (2)C5—C9—H9117.8
C2—N6—N5—C30.7 (3)N1—C1—C3—N44.1 (4)
C4—N3—C1—N10.6 (3)N3—C1—C3—N4−176.4 (2)
C4—N3—C1—C3−179.1 (2)N1—N2—C4—N30.5 (3)
N3—C1—N1—N2−0.3 (3)C1—N3—C4—N2−0.6 (3)
C3—C1—N1—N2179.4 (2)C9—N7—C6—C7−0.9 (4)
C4—N2—N1—C1−0.2 (3)C9—N7—C6—C2178.9 (2)
C3—N4—C2—N60.6 (3)N4—C2—C6—N7−147.8 (3)
C3—N4—C2—C6179.8 (2)N6—C2—C6—N731.2 (3)
N5—N6—C2—N4−0.9 (3)N4—C2—C6—C732.0 (4)
N5—N6—C2—C6180.0 (2)N6—C2—C6—C7−149.0 (2)
N6—N5—C3—N4−0.3 (3)N7—C6—C7—C8−0.8 (4)
N6—N5—C3—C1179.4 (2)C2—C6—C7—C8179.5 (2)
C2—N4—C3—N5−0.2 (3)C9—C5—C8—C7−0.9 (5)
C2—N4—C3—C1−179.9 (2)C6—C7—C8—C51.7 (4)
N1—C1—C3—N5−175.6 (2)C6—N7—C9—C51.7 (4)
N3—C1—C3—N53.9 (4)C8—C5—C9—N7−0.9 (5)
D—H···AD—HH···AD···AD—H···A
N6—H1···N4i0.98 (4)1.93 (4)2.891 (3)165 (3)
N2—H2···N3ii0.99 (3)1.90 (4)2.878 (3)167 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N6—H1⋯N4i0.98 (4)1.93 (4)2.891 (3)165 (3)
N2—H2⋯N3ii0.99 (3)1.90 (4)2.878 (3)167 (3)

Symmetry codes: (i) ; (ii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  2-(5-{6-[5-(Pyrazin-2-yl)-1H-1,2,4-triazol-3-yl]pyridin-2-yl}-1H-1,2,4-triazol-3-yl)pyrazine.

Authors:  Zhouqing Xu; Yanchun Sun; Qiang Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27
  1 in total

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