Literature DB >> 22064978

2-(5-{6-[5-(Pyrazin-2-yl)-1H-1,2,4-triazol-3-yl]pyridin-2-yl}-1H-1,2,4-triazol-3-yl)pyrazine.

Zhouqing Xu, Yanchun Sun, Qiang Wang.   

Abstract

In the title mol-ecule, C(17)H(11)N(11), the five rings are almost coplanar [maxium deviation 0.1949 (1) Å]. The dihedral angles between the two pyrazine rings and the two triazole rings are 1.52 (4) and 2.51 (5)°, respectively. The central pyridine ring forms dihedral angles of 5.57 (1) and 1.71 (1)° with the two triazole rings. The crystal packing consists of a three-dimensional network structure generated by inter-molecular N-H⋯N hydrogen bonds. The crystal structure is further consolidated by π-π stacking [centroid-to-centroid distances 3.599 (10) and 4.769 (13) Å].

Entities:  

Year:  2011        PMID: 22064978      PMCID: PMC3200783          DOI: 10.1107/S1600536811034520

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of compounds containing triazole subunits, see: Zhang et al. (2010 ▶); Fischer (2007 ▶); Ouellette et al. (2007 ▶). For a recent study, see: Xu et al. (2011 ▶). For the synthesis, see: Browne (1975 ▶); Klingele & Brooker (2004 ▶).

Experimental

Crystal data

C17H11N11 M = 369.37 Monoclinic, a = 10.751 (2) Å b = 13.721 (3) Å c = 11.385 (2) Å β = 102.57 (3)° V = 1639.2 (6) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.905, T max = 1.000 17628 measured reflections 3204 independent reflections 2896 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.064 wR(F 2) = 0.125 S = 1.22 3204 reflections 259 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811034520/ng5216sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034520/ng5216Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034520/ng5216Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H11N11F(000) = 760
Mr = 369.37Dx = 1.497 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4186 reflections
a = 10.751 (2) Åθ = 1.9–27.1°
b = 13.721 (3) ŵ = 0.10 mm1
c = 11.385 (2) ÅT = 293 K
β = 102.57 (3)°Prism, colourless
V = 1639.2 (6) Å30.20 × 0.20 × 0.20 mm
Z = 4
Bruker SMART APEX diffractometer3204 independent reflections
Radiation source: fine-focus sealed tube2896 reflections with I > 2σ(I)
graphiteRint = 0.048
ω scansθmax = 26.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −13→13
Tmin = 0.905, Tmax = 1.000k = −16→16
17628 measured reflectionsl = −13→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.22w = 1/[σ2(Fo2) + (0.042P)2 + 0.4894P] where P = (Fo2 + 2Fc2)/3
3204 reflections(Δ/σ)max < 0.001
259 parametersΔρmax = 0.17 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
N70.80331 (17)0.04695 (12)0.48120 (15)0.0328 (4)
N30.65636 (17)0.55996 (12)0.51910 (15)0.0338 (4)
N60.74831 (16)0.30212 (12)0.54161 (15)0.0324 (4)
N10.67651 (19)0.77043 (13)0.71611 (16)0.0429 (5)
N40.73685 (19)0.56738 (13)0.71244 (16)0.0391 (5)
H350.764 (2)0.5883 (17)0.791 (2)0.047*
N50.75302 (19)0.47317 (13)0.68211 (16)0.0412 (5)
C190.9825 (2)−0.15553 (16)0.66349 (19)0.0382 (5)
H191.0142−0.11960.73280.046*
C10.90635 (19)−0.10896 (14)0.56482 (18)0.0308 (5)
N90.91344 (18)0.04313 (13)0.67510 (16)0.0401 (5)
C20.64501 (19)0.72112 (15)0.61304 (18)0.0308 (5)
C30.6795 (2)0.61778 (15)0.61474 (18)0.0311 (5)
N80.86523 (18)0.13308 (13)0.64512 (17)0.0387 (5)
H340.887 (2)0.1853 (17)0.702 (2)0.046*
C40.87349 (19)−0.00581 (14)0.57292 (18)0.0307 (5)
N130.86310 (17)−0.15592 (13)0.46165 (16)0.0365 (4)
N121.01117 (18)−0.24929 (13)0.66175 (17)0.0412 (5)
C70.6963 (2)0.38491 (14)0.48938 (18)0.0311 (5)
C80.8012 (2)0.13480 (15)0.52990 (18)0.0307 (5)
C90.7024 (2)0.47236 (14)0.56489 (18)0.0318 (5)
C100.6893 (2)0.22266 (16)0.34824 (19)0.0368 (5)
H100.68950.16660.30230.044*
C230.6418 (3)0.86407 (17)0.7106 (2)0.0495 (6)
H230.66230.90150.78020.059*
C120.74258 (19)0.22300 (14)0.47064 (18)0.0306 (5)
C180.8945 (2)−0.25062 (16)0.4604 (2)0.0406 (6)
H180.8673−0.28610.38990.049*
N20.54644 (19)0.85860 (14)0.50318 (17)0.0447 (5)
C130.9652 (2)−0.29676 (16)0.5592 (2)0.0410 (6)
H130.9816−0.36310.55480.049*
C140.6359 (2)0.30832 (16)0.2967 (2)0.0393 (5)
H140.59920.31100.21490.047*
C150.5771 (2)0.90720 (17)0.6064 (2)0.0468 (6)
H150.55410.97240.60810.056*
C160.6376 (2)0.38988 (15)0.36799 (19)0.0363 (5)
H160.59990.44760.33520.044*
C220.5812 (2)0.76535 (16)0.5078 (2)0.0396 (5)
H220.56190.72850.43770.048*
U11U22U33U12U13U23
N70.0419 (10)0.0238 (9)0.0304 (9)0.0030 (8)0.0026 (8)0.0000 (7)
N30.0461 (11)0.0226 (9)0.0304 (9)0.0026 (8)0.0033 (8)−0.0003 (7)
N60.0418 (10)0.0226 (9)0.0314 (9)0.0008 (8)0.0049 (8)−0.0015 (7)
N10.0583 (12)0.0295 (10)0.0348 (10)0.0045 (9)−0.0030 (9)−0.0043 (8)
N40.0593 (13)0.0247 (10)0.0288 (10)0.0048 (9)−0.0001 (9)−0.0029 (8)
N50.0619 (13)0.0242 (10)0.0334 (10)0.0060 (9)0.0013 (9)−0.0006 (8)
C190.0474 (13)0.0293 (12)0.0336 (12)−0.0008 (10)−0.0007 (10)0.0024 (9)
C10.0340 (11)0.0257 (11)0.0312 (11)−0.0026 (9)0.0034 (9)−0.0002 (8)
N90.0505 (11)0.0277 (10)0.0363 (10)0.0023 (8)−0.0033 (9)−0.0028 (8)
C20.0363 (11)0.0246 (11)0.0305 (11)0.0020 (9)0.0048 (9)0.0004 (8)
C30.0376 (11)0.0258 (11)0.0281 (11)0.0016 (9)0.0032 (9)0.0000 (8)
N80.0518 (12)0.0241 (10)0.0359 (11)0.0015 (8)0.0002 (9)−0.0050 (8)
C40.0373 (12)0.0230 (10)0.0300 (11)−0.0009 (9)0.0032 (9)0.0004 (8)
N130.0445 (11)0.0278 (10)0.0345 (10)0.0011 (8)0.0025 (8)−0.0006 (8)
N120.0453 (11)0.0314 (11)0.0427 (11)0.0023 (9)0.0003 (9)0.0073 (9)
C70.0372 (11)0.0244 (11)0.0307 (11)−0.0010 (9)0.0052 (9)0.0010 (8)
C80.0367 (11)0.0248 (10)0.0299 (11)−0.0012 (9)0.0056 (9)−0.0023 (8)
C90.0401 (12)0.0230 (10)0.0302 (11)0.0009 (9)0.0030 (9)0.0005 (8)
C100.0468 (13)0.0270 (12)0.0355 (12)0.0001 (10)0.0068 (10)−0.0055 (9)
C230.0717 (17)0.0291 (13)0.0412 (13)0.0063 (12)−0.0017 (12)−0.0085 (10)
C120.0358 (11)0.0239 (11)0.0317 (11)−0.0007 (9)0.0065 (9)−0.0023 (8)
C180.0488 (13)0.0291 (12)0.0399 (13)0.0030 (10)0.0004 (11)−0.0065 (10)
N20.0603 (13)0.0323 (11)0.0390 (11)0.0109 (9)0.0051 (10)0.0030 (8)
C130.0437 (13)0.0267 (12)0.0493 (14)0.0019 (10)0.0031 (11)0.0021 (10)
C140.0501 (14)0.0348 (13)0.0297 (12)−0.0002 (10)0.0018 (10)0.0000 (9)
C150.0606 (16)0.0272 (12)0.0493 (14)0.0089 (11)0.0049 (12)−0.0014 (11)
C160.0470 (13)0.0261 (11)0.0333 (12)0.0014 (10)0.0031 (10)0.0022 (9)
C220.0515 (14)0.0296 (12)0.0354 (12)0.0064 (10)0.0041 (11)−0.0025 (9)
N7—C81.329 (2)N8—H340.96 (2)
N7—C41.357 (3)N13—C181.343 (3)
N3—C31.326 (2)N12—C131.334 (3)
N3—C91.360 (2)C7—C161.390 (3)
N6—C71.346 (2)C7—C91.469 (3)
N6—C121.347 (2)C8—C121.460 (3)
N1—C21.333 (3)C10—C141.381 (3)
N1—C231.336 (3)C10—C121.387 (3)
N4—C31.340 (3)C10—H100.9300
N4—N51.359 (2)C23—C151.372 (3)
N4—H350.92 (2)C23—H230.9300
N5—C91.327 (3)C18—C131.368 (3)
C19—N121.324 (3)C18—H180.9300
C19—C11.393 (3)N2—C151.329 (3)
C19—H190.9300N2—C221.331 (3)
C1—N131.332 (3)C13—H130.9300
C1—C41.467 (3)C14—C161.380 (3)
N9—C41.331 (3)C14—H140.9300
N9—N81.353 (2)C15—H150.9300
C2—C221.384 (3)C16—H160.9300
C2—C31.465 (3)C22—H220.9300
N8—C81.342 (3)
C8—N7—C4102.71 (16)N7—C8—C12127.14 (18)
C3—N3—C9103.07 (16)N8—C8—C12122.96 (18)
C7—N6—C12117.06 (17)N5—C9—N3114.43 (18)
C2—N1—C23115.61 (19)N5—C9—C7123.46 (18)
C3—N4—N5109.94 (17)N3—C9—C7122.10 (18)
C3—N4—H35129.4 (15)C14—C10—C12117.8 (2)
N5—N4—H35120.7 (15)C14—C10—H10121.1
C9—N5—N4102.49 (17)C12—C10—H10121.1
N12—C19—C1122.1 (2)N1—C23—C15122.6 (2)
N12—C19—H19118.9N1—C23—H23118.7
C1—C19—H19118.9C15—C23—H23118.7
N13—C1—C19121.37 (19)N6—C12—C10124.10 (19)
N13—C1—C4118.67 (18)N6—C12—C8115.60 (18)
C19—C1—C4119.95 (18)C10—C12—C8120.26 (18)
C4—N9—N8101.92 (17)N13—C18—C13122.4 (2)
N1—C2—C22121.49 (19)N13—C18—H18118.8
N1—C2—C3117.69 (18)C13—C18—H18118.8
C22—C2—C3120.82 (18)C15—N2—C22115.70 (19)
N3—C3—N4110.06 (18)N12—C13—C18121.8 (2)
N3—C3—C2124.49 (18)N12—C13—H13119.1
N4—C3—C2125.44 (18)C18—C13—H13119.1
C8—N8—N9110.45 (17)C16—C14—C10119.3 (2)
C8—N8—H34129.9 (14)C16—C14—H14120.4
N9—N8—H34119.3 (14)C10—C14—H14120.4
N9—C4—N7115.03 (18)N2—C15—C23122.0 (2)
N9—C4—C1120.37 (18)N2—C15—H15119.0
N7—C4—C1124.60 (17)C23—C15—H15119.0
C1—N13—C18115.89 (18)C14—C16—C7119.3 (2)
C19—N12—C13116.37 (19)C14—C16—H16120.3
N6—C7—C16122.38 (19)C7—C16—H16120.3
N6—C7—C9118.00 (18)N2—C22—C2122.5 (2)
C16—C7—C9119.62 (18)N2—C22—H22118.7
N7—C8—N8109.88 (18)C2—C22—H22118.7
D—H···AD—HH···AD···AD—H···A
N8—H34···N12i0.96 (2)1.92 (2)2.817 (3)155 (2)
N4—H35···N13ii0.92 (2)2.21 (2)3.113 (3)167 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N8—H34⋯N12i0.96 (2)1.92 (2)2.817 (3)155 (2)
N4—H35⋯N13ii0.92 (2)2.21 (2)3.113 (3)167 (2)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Hydrothermal and structural chemistry of the zinc(II)- and cadmium(II)-1,2,4-triazolate systems.

Authors:  Wayne Ouellette; Bruce S Hudson; Jon Zubieta
Journal:  Inorg Chem       Date:  2007-05-12       Impact factor: 5.165

3.  5-(Pyridin-2-yl)-3,3'-bi(1H-1,2,4-triazole).

Authors:  Zhouqing Xu; Xinping Zhao; Qiang Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-13
  3 in total

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