| Literature DB >> 22091063 |
Viktor Vrábel, Július Sivý, Lubomír Svorc, Peter Safář, Stefan Marchalín.
Abstract
The title compound, C(10)H(9)NO(3), is a chiral mol-ecule with one stereogenic carbon atom, but which crystallizes as a racemate in the centrosymmetric space group P2(1)/n. The central six-membered ring of the indolizine moiety adopts a definite envelope conformation, while the conformation of the oxopyrrolidine ring is close to that of a flat-envelope with a maximum deviation of 0.352 (1) Å for the flap atom.Entities:
Year: 2011 PMID: 22091063 PMCID: PMC3213484 DOI: 10.1107/S1600536811027383
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H9NO3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 7934 reflections |
| θ = 3.5–29.3° | |
| µ = 0.11 mm−1 | |
| β = 105.775 (3)° | Block, yellow |
| 0.49 × 0.23 × 0.13 mm | |
| Oxford Diffraction Gemini R CCD diffractometer | 2213 independent reflections |
| Radiation source: fine-focus sealed tube | 1646 reflections with |
| graphite | |
| Detector resolution: 10.4340 pixels mm-1 | θmax = 29.4°, θmin = 3.5° |
| Rotation method data acquisition using ω and φ scans | |
| Absorption correction: analytical (Clark & Reid, 1995) | |
| 14552 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2213 reflections | (Δ/σ)max < 0.001 |
| 127 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Experimental. face-indexed (Oxford Diffraction, 2006) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C2 | 1.15109 (18) | 0.99636 (12) | 0.67889 (14) | 0.0438 (3) | |
| C3 | 1.3182 (2) | 1.01426 (13) | 0.62848 (17) | 0.0543 (4) | |
| H3B | 1.4237 | 1.0285 | 0.7068 | 0.065* | |
| H3A | 1.3015 | 1.0783 | 0.5647 | 0.065* | |
| C4 | 1.3418 (2) | 0.90534 (14) | 0.55443 (18) | 0.0584 (4) | |
| H4B | 1.4692 | 0.8843 | 0.5756 | 0.070* | |
| H4A | 1.2938 | 0.9134 | 0.4538 | 0.070* | |
| C5 | 1.23351 (17) | 0.81624 (11) | 0.61138 (14) | 0.0439 (3) | |
| H5A | 1.3159 | 0.7767 | 0.6906 | 0.053* | |
| C6 | 1.13528 (19) | 0.72915 (11) | 0.50495 (14) | 0.0456 (3) | |
| C7 | 0.96776 (18) | 0.69128 (11) | 0.53212 (13) | 0.0429 (3) | |
| C8 | 0.7398 (2) | 0.58131 (13) | 0.53142 (16) | 0.0539 (4) | |
| H8A | 0.6557 | 0.5223 | 0.5095 | 0.065* | |
| C9 | 0.74188 (18) | 0.66085 (12) | 0.62999 (14) | 0.0475 (3) | |
| H9A | 0.6623 | 0.6671 | 0.6858 | 0.057* | |
| C10 | 0.89106 (17) | 0.73291 (11) | 0.63038 (13) | 0.0408 (3) | |
| C11 | 0.96560 (19) | 0.83359 (13) | 0.71747 (14) | 0.0483 (3) | |
| H11B | 0.8692 | 0.8880 | 0.7146 | 0.058* | |
| H11A | 1.0172 | 0.8106 | 0.8140 | 0.058* | |
| N1 | 1.10563 (14) | 0.88532 (10) | 0.66294 (11) | 0.0425 (3) | |
| O1 | 1.07083 (16) | 1.06761 (9) | 0.72905 (13) | 0.0636 (3) | |
| O2 | 1.19841 (17) | 0.69185 (9) | 0.41368 (12) | 0.0654 (3) | |
| O3 | 0.87461 (14) | 0.59746 (9) | 0.46802 (10) | 0.0535 (3) |
| C2 | 0.0435 (6) | 0.0436 (7) | 0.0472 (7) | 0.0004 (5) | 0.0176 (5) | 0.0013 (5) |
| C3 | 0.0515 (8) | 0.0506 (8) | 0.0679 (9) | −0.0066 (6) | 0.0282 (7) | 0.0042 (7) |
| C4 | 0.0544 (8) | 0.0586 (9) | 0.0760 (10) | −0.0066 (7) | 0.0412 (8) | −0.0008 (7) |
| C5 | 0.0412 (6) | 0.0457 (7) | 0.0519 (7) | 0.0039 (5) | 0.0249 (6) | 0.0033 (6) |
| C6 | 0.0541 (7) | 0.0405 (7) | 0.0511 (7) | 0.0077 (6) | 0.0294 (6) | 0.0049 (5) |
| C7 | 0.0476 (7) | 0.0408 (7) | 0.0437 (7) | 0.0003 (5) | 0.0180 (6) | −0.0004 (5) |
| C8 | 0.0480 (8) | 0.0501 (8) | 0.0624 (9) | −0.0075 (6) | 0.0131 (7) | 0.0025 (7) |
| C9 | 0.0428 (7) | 0.0526 (8) | 0.0495 (7) | −0.0036 (6) | 0.0169 (6) | 0.0068 (6) |
| C10 | 0.0419 (6) | 0.0441 (7) | 0.0392 (6) | −0.0003 (5) | 0.0161 (5) | 0.0044 (5) |
| C11 | 0.0504 (7) | 0.0550 (8) | 0.0492 (7) | −0.0092 (6) | 0.0301 (6) | −0.0073 (6) |
| N1 | 0.0428 (6) | 0.0440 (6) | 0.0487 (6) | −0.0026 (5) | 0.0263 (5) | −0.0035 (5) |
| O1 | 0.0681 (7) | 0.0486 (6) | 0.0852 (8) | 0.0021 (5) | 0.0396 (6) | −0.0122 (5) |
| O2 | 0.0849 (8) | 0.0569 (6) | 0.0742 (7) | 0.0039 (6) | 0.0552 (7) | −0.0080 (5) |
| O3 | 0.0584 (6) | 0.0480 (6) | 0.0559 (6) | −0.0029 (4) | 0.0188 (5) | −0.0085 (4) |
| C2—O1 | 1.2211 (16) | C6—C7 | 1.4472 (18) |
| C2—N1 | 1.3492 (18) | C7—C10 | 1.3578 (17) |
| C2—C3 | 1.5062 (18) | C7—O3 | 1.3717 (16) |
| C3—C4 | 1.512 (2) | C8—C9 | 1.350 (2) |
| C3—H3B | 0.9700 | C8—O3 | 1.3579 (18) |
| C3—H3A | 0.9700 | C8—H8A | 0.9300 |
| C4—C5 | 1.5345 (19) | C9—C10 | 1.4188 (18) |
| C4—H4B | 0.9700 | C9—H9A | 0.9300 |
| C4—H4A | 0.9700 | C10—C11 | 1.4848 (19) |
| C5—N1 | 1.4651 (15) | C11—N1 | 1.4562 (15) |
| C5—C6 | 1.515 (2) | C11—H11B | 0.9700 |
| C5—H5A | 0.9800 | C11—H11A | 0.9700 |
| C6—O2 | 1.2176 (16) | ||
| O1—C2—N1 | 124.75 (12) | C7—C6—C5 | 111.91 (10) |
| O1—C2—C3 | 127.14 (13) | C10—C7—O3 | 110.64 (11) |
| N1—C2—C3 | 108.08 (11) | C10—C7—C6 | 126.76 (13) |
| C2—C3—C4 | 105.48 (12) | O3—C7—C6 | 122.29 (11) |
| C2—C3—H3B | 110.6 | C9—C8—O3 | 112.18 (12) |
| C4—C3—H3B | 110.6 | C9—C8—H8A | 123.9 |
| C2—C3—H3A | 110.6 | O3—C8—H8A | 123.9 |
| C4—C3—H3A | 110.6 | C8—C9—C10 | 105.49 (12) |
| H3B—C3—H3A | 108.8 | C8—C9—H9A | 127.3 |
| C3—C4—C5 | 104.60 (11) | C10—C9—H9A | 127.3 |
| C3—C4—H4B | 110.8 | C7—C10—C9 | 106.58 (12) |
| C5—C4—H4B | 110.8 | C7—C10—C11 | 122.24 (11) |
| C3—C4—H4A | 110.8 | C9—C10—C11 | 131.16 (11) |
| C5—C4—H4A | 110.8 | N1—C11—C10 | 108.71 (10) |
| H4B—C4—H4A | 108.9 | N1—C11—H11B | 109.9 |
| N1—C5—C6 | 111.56 (10) | C10—C11—H11B | 109.9 |
| N1—C5—C4 | 103.12 (11) | N1—C11—H11A | 109.9 |
| C6—C5—C4 | 114.77 (12) | C10—C11—H11A | 109.9 |
| N1—C5—H5A | 109.1 | H11B—C11—H11A | 108.3 |
| C6—C5—H5A | 109.1 | C2—N1—C11 | 123.51 (10) |
| C4—C5—H5A | 109.1 | C2—N1—C5 | 113.76 (10) |
| O2—C6—C7 | 125.20 (14) | C11—N1—C5 | 121.64 (11) |
| O2—C6—C5 | 122.74 (13) | C8—O3—C7 | 105.10 (10) |
| O1—C2—C3—C4 | −170.54 (15) | C8—C9—C10—C7 | −0.07 (15) |
| N1—C2—C3—C4 | 11.15 (17) | C8—C9—C10—C11 | −178.40 (15) |
| C2—C3—C4—C5 | −20.30 (17) | C7—C10—C11—N1 | 9.17 (19) |
| C3—C4—C5—N1 | 21.70 (16) | C9—C10—C11—N1 | −172.72 (13) |
| C3—C4—C5—C6 | 143.24 (13) | O1—C2—N1—C11 | −6.8 (2) |
| N1—C5—C6—O2 | 152.99 (13) | C3—C2—N1—C11 | 171.60 (12) |
| C4—C5—C6—O2 | 36.17 (19) | O1—C2—N1—C5 | −174.95 (14) |
| N1—C5—C6—C7 | −31.17 (16) | C3—C2—N1—C5 | 3.41 (16) |
| C4—C5—C6—C7 | −147.98 (12) | C10—C11—N1—C2 | 153.77 (12) |
| O2—C6—C7—C10 | −178.15 (14) | C10—C11—N1—C5 | −38.95 (17) |
| C5—C6—C7—C10 | 6.1 (2) | C6—C5—N1—C2 | −139.84 (12) |
| O2—C6—C7—O3 | 9.0 (2) | C4—C5—N1—C2 | −16.15 (16) |
| C5—C6—C7—O3 | −166.75 (11) | C6—C5—N1—C11 | 51.73 (16) |
| O3—C8—C9—C10 | −0.56 (16) | C4—C5—N1—C11 | 175.42 (12) |
| O3—C7—C10—C9 | 0.67 (15) | C9—C8—O3—C7 | 0.96 (16) |
| C6—C7—C10—C9 | −172.91 (13) | C10—C7—O3—C8 | −0.99 (15) |
| O3—C7—C10—C11 | 179.19 (12) | C6—C7—O3—C8 | 172.92 (13) |
| C6—C7—C10—C11 | 5.6 (2) |