| Literature DB >> 22091006 |
Charlane C Corrêa, José Eugênio J C Graúdo, Luiz Fernando C de Oliveira, Mauro V de Almeida, Renata Diniz.
Abstract
The title compound, C(6)H(11)N(3)O(2)S, consists of a roughly planar mol-ecule (r.m.s deviation from planarity = 0.077 Å for the non-H atoms) and has the S atom in an anti position to the imine N atom. This N atom is the acceptor of a strongly bent inter-nal N-H⋯N hydrogen bond donated by the amino group. In the crystal, mol-ecules are arranged in undulating layers parallel to (010). The mol-ecules are linked via inter-molecular amino-carboxyl N-H⋯O hydrogen bonds, forming chains parallel to [001]. The chains are cross-linked by N(carbazone)-H⋯S and C-H⋯S inter-actions, forming infinite sheets.Entities:
Year: 2011 PMID: 22091006 PMCID: PMC3212349 DOI: 10.1107/S1600536811026237
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H11N3O2S | |
| Monoclinic, | Melting point: 418 K |
| Hall symbol: -C 2yc | Mo |
| Cell parameters from 106 reflections | |
| θ = 4.7–22.6° | |
| µ = 0.31 mm−1 | |
| β = 116.63 (3)° | |
| Prism, colourless | |
| 0.56 × 0.27 × 0.12 mm |
| Bruker–Nonius KappaCCD diffractometer | 1785 reflections with |
| Radiation source: fine-focus sealed tube | |
| horizonally mounted graphite crystal | θmax = 27.5°, θmin = 5.3° |
| Detector resolution: 9 pixels mm-1 | |
| ω and φ scans | |
| 15270 measured reflections | |
| 2133 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2133 reflections | Δρmax = 0.21 e Å−3 |
| 123 parameters | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.07816 (2) | 0.66899 (7) | 0.18273 (2) | 0.05007 (15) | |
| O1 | 0.36286 (7) | 0.42826 (16) | 0.55879 (6) | 0.0453 (3) | |
| O2 | 0.29362 (8) | 0.4511 (2) | 0.64308 (7) | 0.0599 (4) | |
| N3 | 0.21829 (8) | 0.52146 (17) | 0.42323 (7) | 0.0363 (3) | |
| N2 | 0.14791 (8) | 0.57872 (18) | 0.34827 (7) | 0.0394 (3) | |
| N1 | 0.23628 (9) | 0.5179 (2) | 0.28107 (9) | 0.0541 (4) | |
| C2 | 0.21056 (9) | 0.5244 (2) | 0.49384 (9) | 0.0365 (3) | |
| C1 | 0.15936 (9) | 0.5823 (2) | 0.27447 (9) | 0.0368 (3) | |
| C4 | 0.29221 (9) | 0.4639 (2) | 0.57299 (9) | 0.0378 (3) | |
| C3 | 0.13145 (10) | 0.5866 (3) | 0.50629 (11) | 0.0507 (4) | |
| H3A | 0.1298 | 0.7189 | 0.5069 | 0.076* | |
| H3B | 0.1365 | 0.5398 | 0.5601 | 0.076* | |
| H3C | 0.0773 | 0.5410 | 0.4598 | 0.076* | |
| C6 | 0.51684 (12) | 0.3513 (3) | 0.60556 (14) | 0.0644 (5) | |
| H6A | 0.4977 | 0.2588 | 0.5613 | 0.097* | |
| H6B | 0.5713 | 0.3122 | 0.6537 | 0.097* | |
| H6C | 0.5272 | 0.4650 | 0.5831 | 0.097* | |
| C5 | 0.44536 (10) | 0.3796 (3) | 0.63469 (11) | 0.0503 (4) | |
| H5A | 0.4368 | 0.2677 | 0.6607 | 0.060* | |
| H5B | 0.4626 | 0.4777 | 0.6772 | 0.060* | |
| H1N | 0.2740 (14) | 0.476 (3) | 0.3288 (14) | 0.061 (6)* | |
| H3N | 0.0969 (12) | 0.612 (2) | 0.3430 (11) | 0.045 (4)* | |
| H2N | 0.2477 (13) | 0.525 (3) | 0.2361 (14) | 0.060 (5)* |
| S1 | 0.0402 (2) | 0.0741 (3) | 0.0365 (2) | 0.00740 (18) | 0.01775 (16) | 0.01065 (17) |
| O1 | 0.0387 (5) | 0.0663 (7) | 0.0337 (5) | 0.0055 (5) | 0.0186 (4) | 0.0026 (5) |
| O2 | 0.0558 (7) | 0.0988 (10) | 0.0322 (5) | 0.0012 (6) | 0.0260 (5) | −0.0006 (6) |
| N3 | 0.0358 (6) | 0.0444 (6) | 0.0318 (5) | −0.0029 (5) | 0.0179 (5) | −0.0016 (5) |
| N2 | 0.0344 (6) | 0.0552 (8) | 0.0339 (6) | 0.0028 (5) | 0.0200 (5) | 0.0027 (5) |
| N1 | 0.0421 (7) | 0.0910 (12) | 0.0369 (7) | 0.0153 (7) | 0.0246 (6) | 0.0118 (7) |
| C2 | 0.0385 (7) | 0.0425 (7) | 0.0343 (6) | −0.0052 (6) | 0.0213 (6) | −0.0043 (6) |
| C1 | 0.0352 (6) | 0.0456 (8) | 0.0333 (6) | −0.0042 (6) | 0.0185 (5) | −0.0004 (6) |
| C4 | 0.0415 (7) | 0.0440 (8) | 0.0334 (7) | −0.0053 (6) | 0.0216 (6) | −0.0056 (6) |
| C3 | 0.0431 (8) | 0.0733 (11) | 0.0454 (8) | 0.0025 (8) | 0.0284 (7) | −0.0012 (8) |
| C6 | 0.0447 (9) | 0.0665 (12) | 0.0798 (13) | 0.0050 (8) | 0.0259 (9) | −0.0007 (10) |
| C5 | 0.0430 (8) | 0.0574 (10) | 0.0432 (8) | 0.0009 (7) | 0.0128 (7) | 0.0070 (7) |
| S1—C1 | 1.6808 (16) | N1—H1N | 0.84 (2) |
| O1—C4 | 1.3325 (17) | N1—H2N | 0.88 (2) |
| O1—C5 | 1.4577 (19) | N2—H3N | 0.85 (2) |
| O2—C4 | 1.2069 (17) | C3—H3A | 0.9600 |
| N3—C2 | 1.2860 (17) | C3—H3B | 0.9600 |
| N3—N2 | 1.3675 (17) | C3—H3C | 0.9600 |
| N2—C1 | 1.3745 (17) | C5—H5A | 0.9700 |
| N1—C1 | 1.3217 (19) | C5—H5B | 0.9700 |
| C2—C3 | 1.4989 (19) | C6—H6A | 0.9600 |
| C2—C4 | 1.501 (2) | C6—H6B | 0.9600 |
| C6—C5 | 1.503 (2) | C6—H6C | 0.9600 |
| C4—O1—C5 | 115.86 (11) | C2—C3—H3A | 109.00 |
| C2—N3—N2 | 119.23 (12) | C2—C3—H3B | 109.00 |
| N3—N2—C1 | 118.06 (11) | C2—C3—H3C | 109.00 |
| N3—C2—C3 | 127.72 (14) | H3A—C3—H3B | 109.00 |
| N3—C2—C4 | 115.25 (12) | H3A—C3—H3C | 109.00 |
| C3—C2—C4 | 117.00 (12) | H3B—C3—H3C | 109.00 |
| N1—C1—N2 | 116.55 (13) | O1—C5—H5A | 110.00 |
| N1—C1—S1 | 123.64 (11) | O1—C5—H5B | 110.00 |
| N2—C1—S1 | 119.80 (11) | C6—C5—H5A | 110.00 |
| O2—C4—O1 | 123.40 (14) | C6—C5—H5B | 110.00 |
| O2—C4—C2 | 122.77 (13) | H5A—C5—H5B | 108.00 |
| O1—C4—C2 | 113.83 (11) | C5—C6—H6A | 109.00 |
| O1—C5—C6 | 107.52 (14) | C5—C6—H6B | 109.00 |
| C1—N1—H1N | 118.9 (17) | C5—C6—H6C | 109.00 |
| C1—N1—H2N | 119.2 (15) | H6A—C6—H6B | 109.00 |
| H1N—N1—H2N | 122 (2) | H6A—C6—H6C | 109.00 |
| C1—N2—H3N | 116.4 (12) | H6B—C6—H6C | 109.00 |
| N3—N2—H3N | 125.5 (12) | ||
| C5—O1—C4—O2 | −2.7 (2) | N2—N3—C2—C3 | −0.6 (2) |
| C5—O1—C4—C2 | 176.48 (14) | N2—N3—C2—C4 | −178.40 (13) |
| C4—O1—C5—C6 | −178.14 (15) | N3—C2—C4—O1 | 4.43 (19) |
| C1—N2—N3—C2 | 177.04 (14) | N3—C2—C4—O2 | −176.40 (15) |
| N3—N2—C1—S1 | −174.66 (11) | C3—C2—C4—O1 | −173.59 (15) |
| N3—N2—C1—N1 | 4.4 (2) | C3—C2—C4—O2 | 5.6 (2) |
| H··· | ||||
| N1—H1N···N3 | 0.84 (2) | 2.24 (2) | 2.610 (2) | 107 (2) |
| N1—H2N···O2i | 0.88 (3) | 2.08 (3) | 2.954 (2) | 172 (2) |
| N2—H3N···S1ii | 0.85 (2) | 2.78 (2) | 3.623 (2) | 172 (2) |
| C3—H3C···S1ii | 0.96 | 2.82 | 3.611 (2) | 141 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.84 (2) | 2.24 (2) | 2.610 (2) | 107 (2) |
| N1—H2 | 0.88 (3) | 2.08 (3) | 2.954 (2) | 172 (2) |
| N2—H3 | 0.85 (2) | 2.78 (2) | 3.623 (2) | 172 (2) |
| C3—H3 | 0.96 | 2.82 | 3.611 (2) | 141 |
Symmetry codes: (i) ; (ii) .