Literature DB >> 22090983

(S)-2-[(S,Z)-3-Bromo-1-nitro-4-phenyl-but-3-en-2-yl]cyclo-hexa-none.

Chao Wu1, Long Zhao, Ai-Bao Xia.   

Abstract

In the crystal structure of the title compound, C(16)H(18)BrNO(3), the two stereogenic centres both have an S configuration. The cyclo-hexyl ring adopts a chair conformation. In the crystal, mol-ecules are linked by weak N-O⋯Br contacts [O⋯Br = 3.289 (4) Å].

Entities:  

Year:  2011        PMID: 22090983      PMCID: PMC3212326          DOI: 10.1107/S1600536811025633

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Li et al. (2010 ▶); Chua et al. (2009 ▶). For the asymmetric Michael reaction, which in principle allows for the formation of two contiguous asymmetric centers, see: Zeng & Zhong (2009 ▶); Roca-Lopez et al. (2010 ▶); Tsogoeva (2007 ▶); Sulzer-Mosse & Alexakis (2007 ▶); Mukherjee et al. (2007 ▶).

Experimental

Crystal data

C16H18BrNO3 M = 352.22 Orthorhombic, a = 8.0091 (3) Å b = 12.2395 (6) Å c = 16.3039 (7) Å V = 1598.23 (12) Å3 Z = 4 Mo Kα radiation μ = 2.58 mm−1 T = 296 K 0.33 × 0.29 × 0.25 mm

Data collection

Rigaku R-AXIS RAPID/ZJUG diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.428, T max = 0.525 15575 measured reflections 3636 independent reflections 2369 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.114 S = 1.00 3636 reflections 191 parameters H-atom parameters constrained Δρmax = 0.82 e Å−3 Δρmin = −1.05 e Å−3 Absolute structure: Flack (1983 ▶), 1548 Friedel pairs Flack parameter: −0.018 (17) Data collection: PROCESS-AUTO (Rigaku, 2006 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku, 2007 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811025633/bt5566sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025633/bt5566Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811025633/bt5566Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H18BrNO3F(000) = 720
Mr = 352.22Dx = 1.464 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 10471 reflections
a = 8.0091 (3) Åθ = 3.0–27.4°
b = 12.2395 (6) ŵ = 2.58 mm1
c = 16.3039 (7) ÅT = 296 K
V = 1598.23 (12) Å3Chunk, colorless
Z = 40.33 × 0.29 × 0.25 mm
Rigaku R-AXIS RAPID/ZJUG diffractometer3636 independent reflections
Radiation source: rolling anode2369 reflections with I > 2σ(I)
graphiteRint = 0.051
Detector resolution: 10.00 pixels mm-1θmax = 27.4°, θmin = 3.0°
ω scansh = −10→10
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −15→15
Tmin = 0.428, Tmax = 0.525l = −20→21
15575 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.037w = 1/[σ2(Fo2) + (0.P)2 + 4.1524P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.114(Δ/σ)max = 0.001
S = 1.00Δρmax = 0.82 e Å3
3636 reflectionsΔρmin = −1.05 e Å3
191 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0310 (13)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 1548 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: −0.018 (17)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.63058 (7)0.46482 (5)0.55564 (4)0.0619 (2)
N10.1663 (6)0.3677 (4)0.5794 (3)0.0571 (13)
O20.0229 (5)0.3856 (5)0.5610 (4)0.0905 (15)
O10.1693 (7)0.3171 (5)0.3392 (3)0.0885 (16)
C110.4279 (6)0.7079 (4)0.5742 (3)0.0460 (13)
C20.4282 (7)0.3931 (5)0.3846 (3)0.0495 (13)
H20.52100.34670.40250.059*
C10.3329 (6)0.4313 (4)0.4610 (3)0.0466 (13)
H10.22890.46500.44200.056*
C100.3654 (7)0.6156 (4)0.5251 (3)0.0462 (12)
H100.26580.63050.49790.055*
O30.2193 (7)0.3763 (5)0.6486 (3)0.0933 (17)
C150.4339 (8)0.9025 (5)0.5950 (4)0.0655 (18)
H150.40600.97220.57710.079*
C160.3855 (7)0.8127 (4)0.5505 (4)0.0536 (12)
H160.32250.82270.50310.064*
C140.5235 (8)0.8893 (6)0.6660 (4)0.0655 (18)
H140.55590.95000.69640.079*
C30.5005 (8)0.4881 (5)0.3337 (4)0.0604 (16)
H3A0.41030.53480.31520.073*
H3B0.57430.53140.36780.073*
C90.4228 (6)0.5152 (4)0.5117 (3)0.0460 (12)
C70.3176 (9)0.3261 (5)0.3272 (4)0.0614 (17)
C120.5181 (8)0.6956 (5)0.6466 (4)0.0606 (16)
H120.54700.62600.66470.073*
C80.2845 (8)0.3328 (5)0.5139 (4)0.0559 (15)
H8A0.23240.27740.47990.067*
H8B0.38370.30140.53860.067*
C60.4045 (10)0.2823 (6)0.2531 (4)0.078 (2)
H6A0.32460.24490.21830.093*
H6B0.48870.22980.26980.093*
C40.5965 (9)0.4456 (6)0.2599 (4)0.079 (2)
H4A0.63930.50690.22860.094*
H4B0.69110.40280.27870.094*
C130.5651 (9)0.7863 (6)0.6919 (4)0.0696 (19)
H130.62540.77720.74020.084*
C50.4875 (11)0.3752 (7)0.2046 (4)0.089 (3)
H5A0.55530.34450.16110.107*
H5B0.40190.42040.17970.107*
U11U22U33U12U13U23
Br10.0516 (3)0.0585 (3)0.0756 (4)0.0081 (3)−0.0139 (3)−0.0041 (3)
N10.055 (3)0.056 (3)0.060 (3)−0.008 (2)0.007 (2)0.013 (2)
O20.052 (3)0.117 (4)0.102 (4)0.005 (3)0.001 (3)0.006 (4)
O10.084 (4)0.101 (4)0.080 (3)−0.019 (3)−0.015 (3)−0.023 (3)
C110.046 (3)0.047 (3)0.045 (3)−0.001 (2)0.002 (2)0.000 (2)
C20.053 (3)0.050 (3)0.046 (3)0.005 (3)−0.004 (2)−0.004 (2)
C10.049 (3)0.040 (3)0.052 (3)−0.002 (2)−0.004 (2)0.001 (2)
C100.044 (3)0.048 (3)0.046 (3)0.002 (3)−0.002 (3)−0.002 (2)
O30.098 (4)0.127 (5)0.055 (3)0.012 (3)−0.002 (3)0.010 (3)
C150.064 (4)0.043 (3)0.089 (5)−0.001 (3)0.006 (3)−0.010 (3)
C160.053 (3)0.042 (3)0.066 (3)0.006 (3)−0.001 (3)−0.001 (3)
C140.058 (4)0.060 (4)0.078 (5)−0.012 (3)0.007 (3)−0.023 (4)
C30.064 (4)0.057 (4)0.061 (3)0.000 (3)0.008 (3)0.009 (3)
C90.046 (3)0.043 (3)0.049 (3)−0.001 (2)0.000 (2)0.002 (2)
C70.073 (4)0.057 (4)0.054 (4)0.006 (3)−0.008 (3)−0.001 (3)
C120.076 (4)0.050 (4)0.055 (4)0.006 (3)−0.009 (3)−0.008 (3)
C80.063 (4)0.043 (3)0.061 (4)−0.003 (3)0.005 (3)−0.001 (3)
C60.100 (6)0.073 (5)0.060 (4)0.021 (4)−0.023 (4)−0.018 (4)
C40.093 (5)0.087 (5)0.056 (4)0.003 (5)0.015 (4)0.000 (4)
C130.082 (5)0.065 (4)0.062 (4)0.000 (4)−0.012 (3)−0.018 (3)
C50.123 (7)0.087 (6)0.057 (4)0.024 (5)0.006 (4)−0.005 (4)
Br1—C91.914 (5)C16—H160.9300
N1—O21.208 (6)C14—C131.371 (9)
N1—O31.209 (6)C14—H140.9300
N1—C81.490 (7)C3—C41.520 (8)
O1—C71.209 (8)C3—H3A0.9700
C11—C161.382 (7)C3—H3B0.9700
C11—C121.393 (8)C7—C61.493 (9)
C11—C101.472 (7)C12—C131.385 (8)
C2—C71.528 (8)C12—H120.9300
C2—C11.535 (7)C8—H8A0.9700
C2—C31.542 (8)C8—H8B0.9700
C2—H20.9800C6—C51.536 (9)
C1—C91.502 (7)C6—H6A0.9700
C1—C81.532 (7)C6—H6B0.9700
C1—H10.9800C4—C51.521 (9)
C10—C91.330 (7)C4—H4A0.9700
C10—H100.9300C4—H4B0.9700
C15—C141.371 (9)C13—H130.9300
C15—C161.373 (8)C5—H5A0.9700
C15—H150.9300C5—H5B0.9700
O2—N1—O3123.4 (6)C10—C9—C1123.8 (5)
O2—N1—C8118.5 (6)C10—C9—Br1122.5 (4)
O3—N1—C8118.1 (5)C1—C9—Br1113.7 (4)
C16—C11—C12117.7 (5)O1—C7—C6123.8 (6)
C16—C11—C10118.4 (5)O1—C7—C2121.3 (6)
C12—C11—C10123.7 (5)C6—C7—C2114.7 (6)
C7—C2—C1111.9 (5)C13—C12—C11120.4 (6)
C7—C2—C3107.0 (5)C13—C12—H12119.8
C1—C2—C3113.2 (5)C11—C12—H12119.8
C7—C2—H2108.2N1—C8—C1109.8 (5)
C1—C2—H2108.2N1—C8—H8A109.7
C3—C2—H2108.2C1—C8—H8A109.7
C9—C1—C8110.5 (4)N1—C8—H8B109.7
C9—C1—C2114.6 (4)C1—C8—H8B109.7
C8—C1—C2110.0 (4)H8A—C8—H8B108.2
C9—C1—H1107.1C7—C6—C5110.6 (6)
C8—C1—H1107.1C7—C6—H6A109.5
C2—C1—H1107.1C5—C6—H6A109.5
C9—C10—C11132.8 (5)C7—C6—H6B109.5
C9—C10—H10113.6C5—C6—H6B109.5
C11—C10—H10113.6H6A—C6—H6B108.1
C14—C15—C16120.0 (6)C5—C4—C3111.8 (6)
C14—C15—H15120.0C5—C4—H4A109.3
C16—C15—H15120.0C3—C4—H4A109.3
C15—C16—C11121.7 (6)C5—C4—H4B109.3
C15—C16—H16119.2C3—C4—H4B109.3
C11—C16—H16119.2H4A—C4—H4B107.9
C15—C14—C13119.7 (6)C14—C13—C12120.5 (6)
C15—C14—H14120.2C14—C13—H13119.8
C13—C14—H14120.2C12—C13—H13119.8
C4—C3—C2111.0 (5)C4—C5—C6111.3 (6)
C4—C3—H3A109.4C4—C5—H5A109.4
C2—C3—H3A109.4C6—C5—H5A109.4
C4—C3—H3B109.4C4—C5—H5B109.4
C2—C3—H3B109.4C6—C5—H5B109.4
H3A—C3—H3B108.0H5A—C5—H5B108.0
C7—C2—C1—C9−168.6 (5)C1—C2—C7—O17.4 (9)
C3—C2—C1—C9−47.6 (6)C3—C2—C7—O1−117.2 (7)
C7—C2—C1—C866.2 (6)C1—C2—C7—C6−177.6 (5)
C3—C2—C1—C8−172.8 (5)C3—C2—C7—C657.8 (7)
C16—C11—C10—C9152.7 (6)C16—C11—C12—C13−1.0 (9)
C12—C11—C10—C9−31.9 (9)C10—C11—C12—C13−176.5 (6)
C14—C15—C16—C11−1.5 (9)O2—N1—C8—C175.7 (7)
C12—C11—C16—C151.8 (9)O3—N1—C8—C1−104.4 (6)
C10—C11—C16—C15177.5 (5)C9—C1—C8—N162.7 (6)
C16—C15—C14—C130.4 (10)C2—C1—C8—N1−169.7 (5)
C7—C2—C3—C4−57.4 (7)O1—C7—C6—C5119.3 (8)
C1—C2—C3—C4178.8 (5)C2—C7—C6—C5−55.6 (8)
C11—C10—C9—C1177.3 (5)C2—C3—C4—C558.2 (8)
C11—C10—C9—Br1−3.0 (9)C15—C14—C13—C120.4 (10)
C8—C1—C9—C10−116.9 (6)C11—C12—C13—C140.0 (10)
C2—C1—C9—C10118.1 (6)C3—C4—C5—C6−54.1 (8)
C8—C1—C9—Br163.3 (5)C7—C6—C5—C451.6 (9)
C2—C1—C9—Br1−61.7 (5)
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Asymmetric enamine catalysis.

Authors:  Santanu Mukherjee; Jung Woon Yang; Sebastian Hoffmann; Benjamin List
Journal:  Chem Rev       Date:  2007-12       Impact factor: 60.622

3.  The highly enantioselective Michael addition of ketones to nitrodienes catalyzed by the efficient organocatalyst system of pyrrolidinyl-thioimidazole and chiral thioureido acid.

Authors:  Zhao-Bo Li; Shu-Ping Luo; Yi Guo; Ai-Bao Xia; Dan-Qian Xu
Journal:  Org Biomol Chem       Date:  2010-04-22       Impact factor: 3.876

4.  L-prolinol as a highly enantioselective catalyst for Michael addition of cyclohexanone to nitroolefins.

Authors:  Pei Juan Chua; Bin Tan; Xiaofei Zeng; Guofu Zhong
Journal:  Bioorg Med Chem Lett       Date:  2009-03-25       Impact factor: 2.823

Review 5.  Chiral amines as organocatalysts for asymmetric conjugate addition to nitroolefins and vinyl sulfones via enamine activation.

Authors:  Sarah Sulzer-Mossé; Alexandre Alexakis
Journal:  Chem Commun (Camb)       Date:  2007-03-21       Impact factor: 6.222

  5 in total
  3 in total

1.  (2S,4S)-2-[(S,E)-2-Bromo-1-nitro-methyl-3-phenyl-all-yl]-4-methyl-cyclo-hexa-none.

Authors:  Long Zhao; Chao Wu; Wen-Zeng Weng; Chu-Xia Yan; Ai-Bao Xia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-31

2.  2-[1-(4-Bromo-phen-yl)-2-nitro-eth-yl]hexa-noic acid.

Authors:  Yanpeng Zhang; Can Zhang; Ai-Bao Xia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-05

3.  (2S,4R)-2-[(1R)-1-(4-Bromo-phen-yl)-2-nitro-eth-yl]-4-ethyl-cyclo-hexa-none.

Authors:  Chi-Xiao Zhang; Yan-Peng Zhang; Ai-Bao Xia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-01-19
  3 in total

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