| Literature DB >> 22090840 |
Fouad Bentiss, Frédéric Capet, Michel Lagrenée, Mohamed Saadi, Lahcen El Ammari.
Abstract
The bidentate 1,3,4-thia-diazole ligand, namely,Entities:
Year: 2011 PMID: 22090840 PMCID: PMC3212138 DOI: 10.1107/S1600536811026420
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C12H8N4S)2(H2O)2](BF4)2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 3120 reflections |
| θ = 2.7–26.3° | |
| µ = 0.85 mm−1 | |
| β = 101.455 (6)° | Prism, colourless |
| 0.26 × 0.21 × 0.13 mm | |
| Bruker X8 APEXII CCD area-detector diffractometer | 3120 independent reflections |
| Radiation source: fine-focus sealed tube | 2729 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.3°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 28021 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3120 reflections | (Δ/σ)max < 0.001 |
| 214 parameters | Δρmax = 0.60 e Å−3 |
| 0 restraints | Δρmin = −0.40 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| B1 | 0.5722 (2) | 0.6450 (2) | 0.25602 (17) | 0.0236 (4) | |
| F1 | 0.67390 (15) | 0.59474 (18) | 0.32316 (11) | 0.0707 (6) | |
| F2 | 0.58436 (11) | 0.62341 (12) | 0.15219 (9) | 0.0362 (3) | |
| F3 | 0.46260 (14) | 0.59379 (14) | 0.27433 (14) | 0.0583 (4) | |
| F4 | 0.56853 (15) | 0.77036 (12) | 0.27479 (11) | 0.0494 (4) | |
| C1 | 0.40875 (16) | 0.75569 (16) | −0.02295 (14) | 0.0202 (4) | |
| C2 | 0.47768 (16) | 1.25248 (17) | 0.06948 (13) | 0.0200 (4) | |
| C3 | 0.43547 (18) | 1.35965 (17) | 0.10676 (14) | 0.0236 (4) | |
| H3 | 0.4806 | 1.4333 | 0.1048 | 0.028* | |
| C4 | 0.32542 (18) | 1.35711 (18) | 0.14729 (15) | 0.0258 (4) | |
| H4 | 0.2940 | 1.4292 | 0.1726 | 0.031* | |
| C5 | 0.26311 (18) | 1.24770 (18) | 0.14982 (15) | 0.0265 (4) | |
| H5 | 0.1883 | 1.2433 | 0.1770 | 0.032* | |
| C6 | 0.31231 (18) | 1.14360 (18) | 0.11167 (15) | 0.0248 (4) | |
| H6 | 0.2696 | 1.0686 | 0.1144 | 0.030* | |
| C7 | 0.22180 (17) | 0.74859 (17) | 0.04687 (14) | 0.0210 (4) | |
| C8 | 0.10347 (17) | 0.71642 (18) | 0.08024 (14) | 0.0222 (4) | |
| C9 | 0.01756 (18) | 0.80507 (19) | 0.09554 (16) | 0.0296 (4) | |
| H9 | 0.0335 | 0.8887 | 0.0859 | 0.036* | |
| C10 | −0.09264 (19) | 0.7670 (2) | 0.12544 (17) | 0.0342 (5) | |
| H10 | −0.1541 | 0.8246 | 0.1364 | 0.041* | |
| C11 | −0.11154 (19) | 0.6445 (2) | 0.13902 (16) | 0.0329 (5) | |
| H11 | −0.1862 | 0.6166 | 0.1591 | 0.040* | |
| C12 | −0.0195 (2) | 0.5627 (2) | 0.12282 (16) | 0.0310 (5) | |
| H12 | −0.0326 | 0.4787 | 0.1334 | 0.037* | |
| Ni1 | 0.5000 | 1.0000 | 0.0000 | 0.01936 (10) | |
| N1 | 0.41765 (14) | 1.14452 (14) | 0.07112 (12) | 0.0218 (3) | |
| N2 | 0.38061 (14) | 0.85992 (14) | 0.01661 (12) | 0.0210 (3) | |
| N3 | 0.27253 (14) | 0.85652 (14) | 0.05732 (12) | 0.0226 (3) | |
| N4 | 0.08724 (15) | 0.59655 (15) | 0.09286 (13) | 0.0260 (4) | |
| O1 | 0.61598 (13) | 0.95553 (13) | 0.14395 (11) | 0.0307 (3) | |
| H1W | 0.6844 | 0.9932 | 0.1692 | 0.037* | |
| H2W | 0.6090 | 0.9007 | 0.1886 | 0.037* | |
| S1 | 0.30384 (4) | 0.64191 (4) | −0.01275 (4) | 0.02147 (12) |
| B1 | 0.0194 (10) | 0.0233 (11) | 0.0268 (11) | 0.0023 (8) | 0.0017 (8) | 0.0008 (9) |
| F1 | 0.0620 (10) | 0.1029 (14) | 0.0388 (8) | 0.0561 (10) | −0.0106 (7) | −0.0066 (9) |
| F2 | 0.0351 (7) | 0.0440 (8) | 0.0285 (6) | −0.0059 (6) | 0.0039 (5) | −0.0035 (6) |
| F3 | 0.0514 (9) | 0.0459 (9) | 0.0907 (12) | −0.0177 (7) | 0.0457 (9) | −0.0236 (8) |
| F4 | 0.0759 (10) | 0.0240 (7) | 0.0503 (8) | −0.0093 (7) | 0.0178 (7) | −0.0030 (6) |
| C1 | 0.0189 (9) | 0.0170 (9) | 0.0231 (9) | −0.0021 (7) | 0.0004 (7) | 0.0028 (7) |
| C2 | 0.0188 (9) | 0.0196 (9) | 0.0203 (8) | −0.0010 (7) | 0.0005 (7) | 0.0021 (7) |
| C3 | 0.0248 (10) | 0.0184 (9) | 0.0270 (10) | −0.0014 (7) | 0.0034 (8) | 0.0006 (8) |
| C4 | 0.0283 (10) | 0.0214 (10) | 0.0283 (10) | 0.0025 (8) | 0.0073 (8) | −0.0018 (8) |
| C5 | 0.0248 (10) | 0.0258 (10) | 0.0302 (10) | −0.0003 (8) | 0.0090 (8) | 0.0004 (8) |
| C6 | 0.0243 (9) | 0.0213 (10) | 0.0297 (10) | −0.0038 (8) | 0.0078 (8) | 0.0001 (8) |
| C7 | 0.0197 (9) | 0.0197 (9) | 0.0226 (9) | 0.0002 (7) | 0.0015 (7) | 0.0009 (7) |
| C8 | 0.0194 (9) | 0.0246 (10) | 0.0218 (9) | −0.0032 (8) | 0.0020 (7) | −0.0011 (8) |
| C9 | 0.0247 (10) | 0.0270 (11) | 0.0362 (11) | 0.0009 (8) | 0.0040 (8) | −0.0007 (9) |
| C10 | 0.0246 (10) | 0.0425 (13) | 0.0365 (11) | 0.0058 (9) | 0.0086 (9) | −0.0034 (10) |
| C11 | 0.0244 (10) | 0.0476 (14) | 0.0295 (10) | −0.0075 (9) | 0.0116 (8) | −0.0016 (10) |
| C12 | 0.0337 (11) | 0.0290 (11) | 0.0331 (11) | −0.0092 (9) | 0.0131 (9) | 0.0009 (9) |
| Ni1 | 0.01766 (17) | 0.01400 (17) | 0.02659 (18) | −0.00261 (13) | 0.00479 (13) | −0.00057 (13) |
| N1 | 0.0205 (8) | 0.0182 (8) | 0.0264 (8) | −0.0019 (6) | 0.0039 (6) | 0.0009 (6) |
| N2 | 0.0186 (7) | 0.0179 (8) | 0.0267 (8) | −0.0013 (6) | 0.0048 (6) | 0.0000 (6) |
| N3 | 0.0193 (8) | 0.0208 (8) | 0.0282 (8) | −0.0032 (6) | 0.0056 (6) | 0.0012 (7) |
| N4 | 0.0267 (8) | 0.0233 (9) | 0.0299 (8) | −0.0047 (7) | 0.0099 (7) | −0.0014 (7) |
| O1 | 0.0270 (7) | 0.0276 (8) | 0.0337 (8) | −0.0075 (6) | −0.0030 (6) | 0.0064 (6) |
| S1 | 0.0188 (2) | 0.0158 (2) | 0.0299 (2) | −0.00252 (17) | 0.00479 (18) | 0.00033 (18) |
| B1—F3 | 1.377 (3) | C7—S1 | 1.7517 (19) |
| B1—F1 | 1.385 (3) | C8—N4 | 1.346 (3) |
| B1—F4 | 1.404 (3) | C8—C9 | 1.390 (3) |
| B1—F2 | 1.426 (2) | C9—C10 | 1.393 (3) |
| C1—N2 | 1.322 (2) | C9—H9 | 0.9500 |
| C1—C2i | 1.482 (2) | C10—C11 | 1.382 (3) |
| C1—S1 | 1.7137 (18) | C10—H10 | 0.9500 |
| C2—N1 | 1.357 (2) | C11—C12 | 1.391 (3) |
| C2—C3 | 1.391 (3) | C11—H11 | 0.9500 |
| C2—C1i | 1.482 (2) | C12—N4 | 1.345 (2) |
| C3—C4 | 1.400 (3) | C12—H12 | 0.9500 |
| C3—H3 | 0.9500 | Ni1—N2 | 2.0515 (15) |
| C4—C5 | 1.384 (3) | Ni1—N2i | 2.0515 (15) |
| C4—H4 | 0.9500 | Ni1—O1i | 2.1197 (14) |
| C5—C6 | 1.400 (3) | Ni1—O1 | 2.1197 (14) |
| C5—H5 | 0.9500 | Ni1—N1i | 2.1320 (16) |
| C6—N1 | 1.352 (2) | Ni1—N1 | 2.1320 (16) |
| C6—H6 | 0.9500 | N2—N3 | 1.381 (2) |
| C7—N3 | 1.305 (2) | O1—H1W | 0.8564 |
| C7—C8 | 1.478 (2) | O1—H2W | 0.8588 |
| F3—B1—F1 | 108.98 (19) | C9—C10—H10 | 120.4 |
| F3—B1—F4 | 108.44 (17) | C10—C11—C12 | 118.91 (18) |
| F1—B1—F4 | 109.02 (18) | C10—C11—H11 | 120.5 |
| F3—B1—F2 | 110.41 (17) | C12—C11—H11 | 120.5 |
| F1—B1—F2 | 109.73 (17) | N4—C12—C11 | 123.3 (2) |
| F4—B1—F2 | 110.22 (17) | N4—C12—H12 | 118.4 |
| N2—C1—C2i | 119.49 (16) | C11—C12—H12 | 118.4 |
| N2—C1—S1 | 113.30 (13) | N2—Ni1—N2i | 180.00 (9) |
| C2i—C1—S1 | 127.21 (14) | N2—Ni1—O1i | 89.84 (6) |
| N1—C2—C3 | 123.10 (16) | N2i—Ni1—O1i | 90.16 (6) |
| N1—C2—C1i | 113.09 (16) | N2—Ni1—O1 | 90.16 (6) |
| C3—C2—C1i | 123.81 (16) | N2i—Ni1—O1 | 89.84 (6) |
| C2—C3—C4 | 118.89 (17) | O1i—Ni1—O1 | 180.00 (8) |
| C2—C3—H3 | 120.6 | N2—Ni1—N1i | 79.22 (6) |
| C4—C3—H3 | 120.6 | N2i—Ni1—N1i | 100.78 (6) |
| C5—C4—C3 | 118.81 (18) | O1i—Ni1—N1i | 90.02 (6) |
| C5—C4—H4 | 120.6 | O1—Ni1—N1i | 89.98 (6) |
| C3—C4—H4 | 120.6 | N2—Ni1—N1 | 100.78 (6) |
| C4—C5—C6 | 118.84 (17) | N2i—Ni1—N1 | 79.22 (6) |
| C4—C5—H5 | 120.6 | O1i—Ni1—N1 | 89.98 (6) |
| C6—C5—H5 | 120.6 | O1—Ni1—N1 | 90.02 (6) |
| N1—C6—C5 | 123.20 (17) | N1i—Ni1—N1 | 180.0 |
| N1—C6—H6 | 118.4 | C6—N1—C2 | 117.16 (16) |
| C5—C6—H6 | 118.4 | C6—N1—Ni1 | 128.93 (13) |
| N3—C7—C8 | 123.90 (17) | C2—N1—Ni1 | 113.82 (12) |
| N3—C7—S1 | 114.75 (13) | C1—N2—N3 | 114.22 (15) |
| C8—C7—S1 | 121.34 (14) | C1—N2—Ni1 | 114.28 (12) |
| N4—C8—C9 | 124.27 (17) | N3—N2—Ni1 | 131.42 (12) |
| N4—C8—C7 | 114.47 (16) | C7—N3—N2 | 110.73 (15) |
| C9—C8—C7 | 121.26 (17) | C12—N4—C8 | 116.68 (17) |
| C8—C9—C10 | 117.7 (2) | Ni1—O1—H1W | 123.4 |
| C8—C9—H9 | 121.2 | Ni1—O1—H2W | 131.6 |
| C10—C9—H9 | 121.2 | H1W—O1—H2W | 105.0 |
| C11—C10—C9 | 119.2 (2) | C1—S1—C7 | 87.00 (9) |
| C11—C10—H10 | 120.4 | ||
| N1—C2—C3—C4 | −0.5 (3) | C3—C2—N1—Ni1 | 176.49 (14) |
| C1i—C2—C3—C4 | 178.72 (17) | C1i—C2—N1—Ni1 | −2.83 (19) |
| C2—C3—C4—C5 | 0.7 (3) | C2i—C1—N2—N3 | 179.76 (15) |
| C3—C4—C5—C6 | −0.1 (3) | S1—C1—N2—N3 | −0.4 (2) |
| C4—C5—C6—N1 | −0.7 (3) | C2i—C1—N2—Ni1 | 2.7 (2) |
| N3—C7—C8—N4 | −160.31 (18) | S1—C1—N2—Ni1 | −177.46 (8) |
| S1—C7—C8—N4 | 20.7 (2) | C8—C7—N3—N2 | −178.38 (16) |
| N3—C7—C8—C9 | 20.3 (3) | S1—C7—N3—N2 | 0.6 (2) |
| S1—C7—C8—C9 | −158.62 (15) | C1—N2—N3—C7 | −0.1 (2) |
| N4—C8—C9—C10 | −0.3 (3) | Ni1—N2—N3—C7 | 176.26 (13) |
| C7—C8—C9—C10 | 179.01 (18) | C11—C12—N4—C8 | 1.1 (3) |
| C8—C9—C10—C11 | 0.3 (3) | C9—C8—N4—C12 | −0.4 (3) |
| C9—C10—C11—C12 | 0.3 (3) | C7—C8—N4—C12 | −179.74 (17) |
| C10—C11—C12—N4 | −1.0 (3) | N2—C1—S1—C7 | 0.63 (14) |
| C5—C6—N1—C2 | 0.9 (3) | C2i—C1—S1—C7 | −179.58 (17) |
| C5—C6—N1—Ni1 | −175.27 (14) | N3—C7—S1—C1 | −0.72 (15) |
| C3—C2—N1—C6 | −0.2 (3) | C8—C7—S1—C1 | 178.31 (16) |
| C1i—C2—N1—C6 | −179.56 (16) |
| H··· | ||||
| O1—H1W···F1ii | 0.86 | 1.88 | 2.704 (2) | 160. |
| O1—H2W···F4 | 0.86 | 1.94 | 2.7880 (19) | 171. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.86 | 1.88 | 2.704 (2) | 160 |
| O1—H2 | 0.86 | 1.94 | 2.7880 (19) | 171 |
Symmetry code: (i) .