Literature DB >> 22084958

A framework for image-based classification of mitotic cells in asynchronous populations.

Scott D Slattery1, Justin Y Newberg, Adam T Szafran, Rebecca M Hall, Bill R Brinkley, Michael A Mancini.   

Abstract

High content screening (HCS) has emerged an important tool for drug discovery because it combines rich readouts of cellular responses in a single experiment. Inclusion of cell cycle analysis into HCS is essential to identify clinically suitable anticancer drugs that disrupt the aberrant mitotic activity of cells. One challenge for integration of cell cycle analysis into HCS is that cells must be chemically synchronized to specific phases, adding experimental complexity to high content screens. To address this issue, we have developed a rules-based method that utilizes mitotic phosphoprotein monoclonal 2 (MPM-2) marker and works consistently in different experimental conditions and in asynchronous populations. Further, the performance of the rules-based method is comparable to established machine learning approaches for classifying cell cycle data, indicating the robustness of the features we use in the framework. As such, we suggest the use of MPM-2 analysis and its associated expressive features for integration into HCS approaches.

Mesh:

Substances:

Year:  2011        PMID: 22084958      PMCID: PMC3323936          DOI: 10.1089/adt.2011.0397

Source DB:  PubMed          Journal:  Assay Drug Dev Technol        ISSN: 1540-658X            Impact factor:   1.738


  20 in total

1.  Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy.

Authors:  Xiaowei Chen; Xiaobo Zhou; Stephen T C Wong
Journal:  IEEE Trans Biomed Eng       Date:  2006-04       Impact factor: 4.538

2.  DNA topoisomerase II alpha is the major chromosome protein recognized by the mitotic phosphoprotein antibody MPM-2.

Authors:  S Taagepera; P N Rao; F H Drake; G J Gorbsky
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

3.  Resolution of mitotic cells using laser scanning cytometry.

Authors:  E Luther; L A Kamentsky
Journal:  Cytometry       Date:  1996-04-01

4.  Myt1: a membrane-associated inhibitory kinase that phosphorylates Cdc2 on both threonine-14 and tyrosine-15.

Authors:  P R Mueller; T R Coleman; A Kumagai; W G Dunphy
Journal:  Science       Date:  1995-10-06       Impact factor: 47.728

5.  Phosphoproteins are components of mitotic microtubule organizing centers.

Authors:  D D Vandre; F M Davis; P N Rao; G G Borisy
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

6.  Aurora-C kinase is a novel chromosomal passenger protein that can complement Aurora-B kinase function in mitotic cells.

Authors:  Kaori Sasai; Hiroshi Katayama; David L Stenoien; Satoshi Fujii; Reiko Honda; Masashi Kimura; Yukio Okano; Masaaki Tatsuka; Fumio Suzuki; Erich A Nigg; William C Earnshaw; William R Brinkley; Subrata Sen
Journal:  Cell Motil Cytoskeleton       Date:  2004-12

7.  Mitosis-specific monoclonal antibody MPM-2 inhibits Xenopus oocyte maturation and depletes maturation-promoting activity.

Authors:  J Kuang; J Zhao; D A Wright; G F Saunders; P N Rao
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

8.  cdc25 is one of the MPM-2 antigens involved in the activation of maturation-promoting factor.

Authors:  J Kuang; C L Ashorn; M Gonzalez-Kuyvenhoven; J E Penkala
Journal:  Mol Biol Cell       Date:  1994-02       Impact factor: 4.138

9.  Cell cycle regulation of a Xenopus Wee1-like kinase.

Authors:  P R Mueller; T R Coleman; W G Dunphy
Journal:  Mol Biol Cell       Date:  1995-01       Impact factor: 4.138

10.  MPM-2 antibody-reactive phosphorylations can be created in detergent-extracted cells by kinetochore-bound and soluble kinases.

Authors:  L Renzi; M S Gersch; M S Campbell; L Wu; S A Osmani; G J Gorbsky
Journal:  J Cell Sci       Date:  1997-09       Impact factor: 5.285

View more
  4 in total

1.  HREM, RNAseq and Cell Cycle Analyses Reveal the Role of the G2/M-Regulatory Protein, WEE1, on the Survivability of Chicken Embryos during Diapause.

Authors:  Narayan Pokhrel; Olga Genin; Dalit Sela-Donenfeld; Yuval Cinnamon
Journal:  Biomedicines       Date:  2022-03-27

2.  FindFoci: a focus detection algorithm with automated parameter training that closely matches human assignments, reduces human inconsistencies and increases speed of analysis.

Authors:  Alex D Herbert; Antony M Carr; Eva Hoffmann
Journal:  PLoS One       Date:  2014-12-05       Impact factor: 3.240

3.  A deep learning model (FociRad) for automated detection of γ-H2AX foci and radiation dose estimation.

Authors:  Rujira Wanotayan; Khaisang Chousangsuntorn; Phasit Petisiwaveth; Thunchanok Anuttra; Waritsara Lertchanyaphan; Tanwiwat Jaikuna; Kulachart Jangpatarapongsa; Pimpon Uttayarat; Teerawat Tongloy; Chousak Chousangsuntorn; Siridech Boonsang
Journal:  Sci Rep       Date:  2022-04-01       Impact factor: 4.379

4.  Tubulin/microtubules as novel clozapine targets.

Authors:  Mizuki Hino; Takeshi Kondo; Yasuto Kunii; Junya Matsumoto; Akira Wada; Shin-Ichi Niwa; Mitsutoshi Setou; Hirooki Yabe
Journal:  Neuropsychopharmacol Rep       Date:  2021-12-28
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.