Literature DB >> 22081347

Tissue microarrays as a tool in the discovery and validation of predictive biomarkers.

Stephen M Hewitt1.   

Abstract

The tissue microarray (TMA) is the embodiment of high-throughput pathology. The platform combines tens to hundreds of tissue samples on a single microscope slide for interrogation with routine molecular pathology tools. TMAs have enabled the rapid and cost-effective screening of biomarkers for diagnostic, prognostic, and predictive utility. Most commonly applied to the field of oncology, the TMA has accelerated the development of new biomarkers, and is emerging as an essential tool in the discovery and validation of tissue biomarkers for use in personalized medicine. This chapter provides an overview of TMA technology and highlights the advantages of using TMAs as tools toward rapid introduction of new biomarkers for clinical use.

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Year:  2012        PMID: 22081347      PMCID: PMC7457565          DOI: 10.1007/978-1-60327-216-2_13

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  42 in total

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Journal:  Adv Anat Pathol       Date:  2004-03       Impact factor: 3.875

2.  Infrared spectroscopic imaging for histopathologic recognition.

Authors:  Daniel C Fernandez; Rohit Bhargava; Stephen M Hewitt; Ira W Levin
Journal:  Nat Biotechnol       Date:  2005-03-27       Impact factor: 54.908

Review 3.  Tissue handling and specimen preparation in surgical pathology: issues concerning the recovery of nucleic acids from formalin-fixed, paraffin-embedded tissue.

Authors:  Stephen M Hewitt; Fraser A Lewis; Yanxiang Cao; Richard C Conrad; Maureen Cronin; Kathleen D Danenberg; Thomas J Goralski; John P Langmore; Rajiv G Raja; P Mickey Williams; John F Palma; Janet A Warrington
Journal:  Arch Pathol Lab Med       Date:  2008-12       Impact factor: 5.534

4.  Proteomic expression profiling of thyroid neoplasms.

Authors:  Till Braunschweig; Klaus Kaserer; Joon-Yong Chung; Sven Bilke; David Krizman; Vladimir Knezevic; Stephen M Hewitt
Journal:  Proteomics Clin Appl       Date:  2007-03       Impact factor: 3.494

5.  alpha-Methylacyl coenzyme A racemase as a tissue biomarker for prostate cancer.

Authors:  Mark A Rubin; Ming Zhou; Saravana M Dhanasekaran; Sooryanarayana Varambally; Terrence R Barrette; Martin G Sanda; Kenneth J Pienta; Debashis Ghosh; Arul M Chinnaiyan
Journal:  JAMA       Date:  2002-04-03       Impact factor: 56.272

6.  Experimental validation of peptide immunohistochemistry controls.

Authors:  Steven A Bogen; Kodela Vani; Brian McGraw; Vin Federico; Iqbal Habib; Ron Zeheb; Ed Luther; Colin Tristram; Seshi R Sompuram
Journal:  Appl Immunohistochem Mol Morphol       Date:  2009-05

7.  Wnt5A regulates expression of tumor-associated antigens in melanoma via changes in signal transducers and activators of transcription 3 phosphorylation.

Authors:  Samudra K Dissanayake; Purevdorj B Olkhanud; Michael P O'Connell; Arnell Carter; Amanda D French; Tura C Camilli; Chineye D Emeche; Kyle J Hewitt; Devin T Rosenthal; Poloko D Leotlela; Michael S Wade; Sherry W Yang; Larry Brant; Brian J Nickoloff; Jane L Messina; Arya Biragyn; Keith S Hoek; Dennis D Taub; Dan L Longo; Vernon K Sondak; Stephen M Hewitt; Ashani T Weeraratna
Journal:  Cancer Res       Date:  2008-12-15       Impact factor: 12.701

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Journal:  Lab Invest       Date:  1986-08       Impact factor: 5.662

9.  Loss of antigenicity in stored sections of breast cancer tissue microarrays.

Authors:  Jennifer H Fergenbaum; Montserrat Garcia-Closas; Stephen M Hewitt; Jolanta Lissowska; Lori C Sakoda; Mark E Sherman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2004-04       Impact factor: 4.254

10.  Overexpression of CDC25B and LAMC2 mRNA and protein in esophageal squamous cell carcinomas and premalignant lesions in subjects from a high-risk population in China.

Authors:  Jian-Zhong Shou; Nan Hu; Mikiko Takikita; Mark J Roth; Laura Lee Johnson; Carol Giffen; Quan-Hong Wang; Chaoyu Wang; Yuan Wang; Hua Su; Li-Hui Kong; Michael R Emmert-Buck; Alisa M Goldstein; Stephen M Hewitt; Philip R Taylor
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2008-06       Impact factor: 4.254

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  10 in total

1.  Cell and tissue microarray technologies for protein and nucleic acid expression profiling.

Authors:  Marina Cardano; Giuseppe R Diaferia; Maurizio Falavigna; Chiara C Spinelli; Fausto Sessa; Pasquale DeBlasio; Ida Biunno
Journal:  J Histochem Cytochem       Date:  2012-11-19       Impact factor: 2.479

2.  Optimization of Tissue Microarrays from Banked Human Formalin-Fixed Paraffin Embedded Tissues in the Cancer Research Setting.

Authors:  Tammy Sexton; Gregory L Kucera; Edward A Levine; Kounosuke Watabe; Stacey S O'Neill
Journal:  Biopreserv Biobank       Date:  2019-06-13       Impact factor: 2.300

3.  Evidence for heightened hexokinase II immunoexpression in hepatocyte dysplasia and hepatocellular carcinoma.

Authors:  Grace Guzman; Rohini Chennuri; Alexander Chan; Bryan Rea; Ada Quintana; Roshan Patel; Pei-Zhang Xu; Hui Xie; Nissim Hay
Journal:  Dig Dis Sci       Date:  2014-11-08       Impact factor: 3.199

4.  CD163+ macrophages predict a poor prognosis in patients with primary T1 high-grade urothelial carcinoma of the bladder.

Authors:  Guoliang Yang; Lianhua Zhang; Mengyao Liu; Qiang Liu; Xuehui Duan; Juanjie Bo
Journal:  World J Urol       Date:  2019-03-13       Impact factor: 4.226

Review 5.  Applications and continued evolution of glycan imaging mass spectrometry.

Authors:  Colin T McDowell; Xiaowei Lu; Anand S Mehta; Peggi M Angel; Richard R Drake
Journal:  Mass Spectrom Rev       Date:  2021-08-15       Impact factor: 10.946

6.  Annexin 2 protein expression is associated with breast cancer subtypes in African American women.

Authors:  Desta A Beyene; Norma F Kanarek; Tammey J Naab; Luisel L Ricks-Santi; Tamaro S Hudson
Journal:  Heliyon       Date:  2020-02-05

7.  Host tissue and glycan binding specificities of avian viral attachment proteins using novel avian tissue microarrays.

Authors:  Iresha N Ambepitiya Wickramasinghe; Robert P de Vries; Amber M Eggert; Nantaporn Wandee; Cornelis A M de Haan; Andrea Gröne; Monique H Verheije
Journal:  PLoS One       Date:  2015-06-02       Impact factor: 3.240

8.  Skp2 expression has different clinicopathological and prognostic implications in lung adenocarcinoma and squamous cell carcinoma.

Authors:  Kaize Zhong; Fan Yang; Qiuying Han; Jing Chen; Jun Wang
Journal:  Oncol Lett       Date:  2018-06-20       Impact factor: 2.967

9.  Combined features based on MT1-MMP expression, CD11b + immunocytes density and LNR predict clinical outcomes of gastric cancer.

Authors:  Chun-Wei Peng; Lin-Wei Wang; Min Fang; Gui-Fang Yang; Yan Li; Dai-Wen Pang
Journal:  J Transl Med       Date:  2013-06-20       Impact factor: 5.531

10.  Detection of Phenotypic Alterations Using High-Content Analysis of Whole-Slide Images.

Authors:  Abbas Shirinifard; Suresh Thiagarajan; Peter Vogel; András Sablauer
Journal:  J Histochem Cytochem       Date:  2016-03-29       Impact factor: 2.479

  10 in total

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