Literature DB >> 22080567

Metabolomic NMR fingerprinting to identify and predict survival of patients with metastatic colorectal cancer.

Ivano Bertini1, Stefano Cacciatore, Benny V Jensen, Jakob V Schou, Julia S Johansen, Mogens Kruhøffer, Claudio Luchinat, Dorte L Nielsen, Paola Turano.   

Abstract

Earlier detection of patients with metastatic colorectal cancer (mCRC) might improve their treatment and survival outcomes. In this study, we used proton nuclear magnetic resonance ((1)H-NMR) to profile the serum metabolome in patients with mCRC and determine whether a disease signature may exist that is strong enough to predict overall survival (OS). In 153 patients with mCRC and 139 healthy subjects from three Danish hospitals, we profiled two independent sets of serum samples in a prospective phase II study. In the training set, (1)H-NMR metabolomic profiling could discriminate patients with mCRC from healthy subjects with a cross-validated accuracy of 100%. In the validation set, 96.7% of subjects were correctly classified. Patients from the training set with maximally divergent OS were chosen to construct an OS predictor. After validation, patients predicted to have short OS had significantly reduced survival (HR, 3.4; 95% confidence interval, 2.06-5.50; P = 1.33 × 10(-6)). A number of metabolites concurred with the (1)H-NMR fingerprint of mCRC, offering insights into mCRC metabolic pathways. Our findings establish that (1)H-NMR profiling of patient serum can provide a strong metabolomic signature of mCRC and that analysis of this signature may offer an independent tool to predict OS. ©2011 AACR.

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Year:  2011        PMID: 22080567     DOI: 10.1158/0008-5472.CAN-11-1543

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  57 in total

1.  Regulation of the metabolite profile by an APC gene mutation in colorectal cancer.

Authors:  Tomoo Yoshie; Shin Nishiumi; Yoshihiro Izumi; Aya Sakai; Jun Inoue; Takeshi Azuma; Masaru Yoshida
Journal:  Cancer Sci       Date:  2012-04-12       Impact factor: 6.716

2.  Serum metabolomic profiles evaluated after surgery may identify patients with oestrogen receptor negative early breast cancer at increased risk of disease recurrence. Results from a retrospective study.

Authors:  Leonardo Tenori; Catherine Oakman; Patrick G Morris; Ewa Gralka; Natalie Turner; Silvia Cappadona; Monica Fornier; Cliff Hudis; Larry Norton; Claudio Luchinat; Angelo Di Leo
Journal:  Mol Oncol       Date:  2014-08-10       Impact factor: 6.603

3.  Label-free detection of nasopharyngeal and liver cancer using surface-enhanced Raman spectroscopy and partial lease squares combined with support vector machine.

Authors:  Yun Yu; Yating Lin; Chaoxian Xu; Kecan Lin; Qing Ye; Xiaoyan Wang; Shusen Xie; Rong Chen; Juqiang Lin
Journal:  Biomed Opt Express       Date:  2018-11-07       Impact factor: 3.732

4.  Identification of Serum Markers of Esophageal Adenocarcinoma by Global and Targeted Metabolic Profiling.

Authors:  Beatriz Sanchez-Espiridion; Dong Liang; Jaffer A Ajani; Su Liang; Yuanqing Ye; Michelle A T Hildebrandt; Jian Gu; Xifeng Wu
Journal:  Clin Gastroenterol Hepatol       Date:  2015-05-19       Impact factor: 11.382

5.  Metabolic Profiling in Formalin-Fixed and Paraffin-Embedded Prostate Cancer Tissues.

Authors:  Stefano Cacciatore; Giorgia Zadra; Clyde Bango; Kathryn L Penney; Svitlana Tyekucheva; Oscar Yanes; Massimo Loda
Journal:  Mol Cancer Res       Date:  2017-01-10       Impact factor: 5.852

Review 6.  Analysis of bacterial biofilms using NMR-based metabolomics.

Authors:  Bo Zhang; Robert Powers
Journal:  Future Med Chem       Date:  2012-06       Impact factor: 3.808

7.  Knowledge discovery by accuracy maximization.

Authors:  Stefano Cacciatore; Claudio Luchinat; Leonardo Tenori
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-24       Impact factor: 11.205

8.  Molecular Biomarkers of Colorectal Cancer and Cancer Disparities: Current Status and Perspective.

Authors:  Upender Manne; Trafina Jadhav; Balananda-Dhurjati Kumar Putcha; Temesgen Samuel; Shivani Soni; Chandrakumar Shanmugam; Esther A Suswam
Journal:  Curr Colorectal Cancer Rep       Date:  2016-09-20

9.  Critical review of reporting of the data analysis step in metabolomics.

Authors:  E C Considine; G Thomas; A L Boulesteix; A S Khashan; L C Kenny
Journal:  Metabolomics       Date:  2017-12-01       Impact factor: 4.290

Review 10.  Nuclear magnetic resonance spectroscopy as a new approach for improvement of early diagnosis and risk stratification of prostate cancer.

Authors:  Bo Yang; Guo-Qiang Liao; Xiao-Fei Wen; Wei-Hua Chen; Sheng Cheng; Jens-Uwe Stolzenburg; Roman Ganzer; Jochen Neuhaus
Journal:  J Zhejiang Univ Sci B       Date:  2017 Nov.       Impact factor: 3.066

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