Literature DB >> 22078561

Mechanism of fibrin(ogen) forced unfolding.

Artem Zhmurov1, Andre E X Brown, Rustem I Litvinov, Ruxandra I Dima, John W Weisel, Valeri Barsegov.   

Abstract

Fibrinogen, upon enzymatic conversion to monomeric fibrin, provides the building blocks for fibrin polymer, the scaffold of blood clots and thrombi. Little has been known about the force-induced unfolding of fibrin(ogen), even though it is the foundation for the mechanical and rheological properties of fibrin, which are essential for hemostasis. We determined mechanisms and mapped the free energy landscape of the elongation of fibrin(ogen) monomers and oligomers through combined experimental and theoretical studies of the nanomechanical properties of fibrin(ogen), using atomic force microscopy-based single-molecule unfolding and simulations in the experimentally relevant timescale. We have found that mechanical unraveling of fibrin(ogen) is determined by the combined molecular transitions that couple stepwise unfolding of the γ chain nodules and reversible extension-contraction of the α-helical coiled-coil connectors. These findings provide important characteristics of the fibrin(ogen) nanomechanics necessary to understand the molecular origins of fibrin viscoelasticity at the fiber and whole clot levels. Copyright Â
© 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22078561      PMCID: PMC3337780          DOI: 10.1016/j.str.2011.08.013

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  49 in total

1.  Conversion of fibrinogen to fibrin: mechanism of exposure of tPA- and plasminogen-binding sites.

Authors:  S Yakovlev; E Makogonenko; N Kurochkina; W Nieuwenhuizen; K Ingham; L Medved
Journal:  Biochemistry       Date:  2000-12-26       Impact factor: 3.162

2.  Role of the beta-strand insert in the central domain of the fibrinogen gamma-module.

Authors:  S Yakovlev; S Litvinovich; D Loukinov; L Medved
Journal:  Biochemistry       Date:  2000-12-26       Impact factor: 3.162

3.  The crystal structure of modified bovine fibrinogen.

Authors:  J H Brown; N Volkmann; G Jun; A H Henschen-Edman; C Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

4.  Structural and functional role of the beta-strand insert (gamma 381-390) in the fibrinogen gamma-module. A "pull out" hypothesis.

Authors:  S Yakovlev; D Loukinov; L Medved
Journal:  Ann N Y Acad Sci       Date:  2001       Impact factor: 5.691

5.  Conformational changes upon conversion of fibrinogen into fibrin. The mechanisms of exposure of cryptic sites.

Authors:  L Medved; G Tsurupa; S Yakovlev
Journal:  Ann N Y Acad Sci       Date:  2001       Impact factor: 5.691

6.  Crystal structure of the central region of bovine fibrinogen (E5 fragment) at 1.4-A resolution.

Authors:  J Madrazo; J H Brown; S Litvinovich; R Dominguez; S Yakovlev; L Medved; C Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-09       Impact factor: 11.205

7.  The myosin coiled-coil is a truly elastic protein structure.

Authors:  Ingo Schwaiger; Clara Sattler; Daniel R Hostetter; Matthias Rief
Journal:  Nat Mater       Date:  2002-12       Impact factor: 43.841

8.  Clotting of fibrinogen. 2. Calorimetry of the reversal of the effect of calcium on clotting with thrombin and with ancrod.

Authors:  E Mihalyi; J W Donovan
Journal:  Biochemistry       Date:  1985-07-02       Impact factor: 3.162

9.  Domains in the fibrinogen molecule.

Authors:  P L Privalov; L V Medved
Journal:  J Mol Biol       Date:  1982-08-25       Impact factor: 5.469

10.  The preparation and properties of human fibrinogen of relatively high solubility.

Authors:  M W Mosesson; S Sherry
Journal:  Biochemistry       Date:  1966-09       Impact factor: 3.162

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  39 in total

1.  Molecular investigations into the mechanics of a muscle anchoring complex.

Authors:  Nicholas K Bodmer; Kelly E Theisen; Ruxandra I Dima
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

2.  Optimized Fragmentation for Quantitative Analysis of Fucosylated N-Glycoproteins by LC-MS-MRM.

Authors:  Wei Yuan; Renhuizi Wei; Radoslav Goldman; Miloslav Sanda
Journal:  Anal Chem       Date:  2019-07-03       Impact factor: 6.986

3.  Submillisecond elastic recoil reveals molecular origins of fibrin fiber mechanics.

Authors:  Nathan E Hudson; Feng Ding; Igal Bucay; E Timothy O'Brien; Oleg V Gorkun; Richard Superfine; Susan T Lord; Nikolay V Dokholyan; Michael R Falvo
Journal:  Biophys J       Date:  2013-06-18       Impact factor: 4.033

4.  Molecular mechanisms, thermodynamics, and dissociation kinetics of knob-hole interactions in fibrin.

Authors:  Olga Kononova; Rustem I Litvinov; Artem Zhmurov; Andrey Alekseenko; Chia Ho Cheng; Silvi Agarwal; Kenneth A Marx; John W Weisel; Valeri Barsegov
Journal:  J Biol Chem       Date:  2013-05-28       Impact factor: 5.157

5.  Adaptation of fibrous biopolymers to recurring increasing strains.

Authors:  John W Weisel; Rustem I Litvinov
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-10       Impact factor: 11.205

6.  Structural transitions and energy landscape for Cowpea Chlorotic Mottle Virus capsid mechanics from nanomanipulation in vitro and in silico.

Authors:  Olga Kononova; Joost Snijder; Melanie Brasch; Jeroen Cornelissen; Ruxandra I Dima; Kenneth A Marx; Gijs J L Wuite; Wouter H Roos; Valeri Barsegov
Journal:  Biophys J       Date:  2013-10-15       Impact factor: 4.033

7.  Cells actively stiffen fibrin networks by generating contractile stress.

Authors:  Karin A Jansen; Rommel G Bacabac; Izabela K Piechocka; Gijsje H Koenderink
Journal:  Biophys J       Date:  2013-11-19       Impact factor: 4.033

8.  Exposure of fibrinogen and thrombin to nitric oxide donor ProliNONOate affects fibrin clot properties.

Authors:  Christine C Helms; Shannon Kapadia; Anne C Gilmore; Zhexi Lu; Swati Basu; Daniel B Kim-Shapiro
Journal:  Blood Coagul Fibrinolysis       Date:  2017-07       Impact factor: 1.276

9.  Structural Basis of Interfacial Flexibility in Fibrin Oligomers.

Authors:  Artem Zhmurov; Anna D Protopopova; Rustem I Litvinov; Pavel Zhukov; Alexander R Mukhitov; John W Weisel; Valeri Barsegov
Journal:  Structure       Date:  2016-09-29       Impact factor: 5.006

Review 10.  A Review of Single-Cell Adhesion Force Kinetics and Applications.

Authors:  Ashwini Shinde; Kavitha Illath; Pallavi Gupta; Pallavi Shinde; Ki-Taek Lim; Moeto Nagai; Tuhin Subhra Santra
Journal:  Cells       Date:  2021-03-05       Impact factor: 6.600

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