Literature DB >> 22072690

Measuring the quality of neuronal identification in ensemble recordings.

Samuel A Neymotin1, William W Lytton, Andrey V Olypher, André A Fenton.   

Abstract

Technological advances in electrode construction and digital signal processing now allow recording simultaneous extracellular action potential discharges from many single neurons, with the potential to revolutionize understanding of the neural codes for sensory, motor, and cognitive variables. Such studies have revealed the importance of ensemble neural codes, encoding information in the dynamic relationships among the action potential spike trains of multiple single neurons. Although the success of this research depends on the accurate classification of extracellular action potentials to individual neurons, there are no widely used quantitative methods for assessing the quality of the classifications. Here we describe information theoretic measures of action potential waveform isolation applicable to any dataset that have an intuitive, universal interpretation, that are not dependent on the methods or choice of parameters for single-unit isolation, and that have been validated using a dataset of simultaneous intracellular and extracellular neuronal recordings from Sprague Dawley rats.

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Mesh:

Year:  2011        PMID: 22072690      PMCID: PMC3247202          DOI: 10.1523/JNEUROSCI.4053-11.2011

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  26 in total

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Review 3.  What ensemble recordings reveal about functional hippocampal cell encoding.

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Authors:  Shy Shoham; Matthew R Fellows; Richard A Normann
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5.  Organization of cell assemblies in the hippocampus.

Authors:  Kenneth D Harris; Jozsef Csicsvari; Hajime Hirase; George Dragoi; György Buzsáki
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Review 6.  Large-scale recording of neuronal ensembles.

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7.  Tracking neurons recorded from tetrodes across time.

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Journal:  J Neurosci Methods       Date:  2004-05-30       Impact factor: 2.390

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9.  Massively parallel recording of unit and local field potentials with silicon-based electrodes.

Authors:  Jozsef Csicsvari; Darrell A Henze; Brian Jamieson; Kenneth D Harris; Anton Sirota; Péter Barthó; Kensall D Wise; György Buzsáki
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10.  Ensemble place codes in hippocampus: CA1, CA3, and dentate gyrus place cells have multiple place fields in large environments.

Authors:  Eunhye Park; Dino Dvorak; André A Fenton
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  9 in total

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Authors:  Samuel A Neymotin; Zoe N Talbot; Jeeyune Q Jung; André A Fenton; William W Lytton
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5.  Phencyclidine Discoordinates Hippocampal Network Activity But Not Place Fields.

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7.  SpikeForest, reproducible web-facing ground-truth validation of automated neural spike sorters.

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8.  Electrophysiological evidence for functionally distinct neuronal populations in the human substantia nigra.

Authors:  Ashwin G Ramayya; Kareem A Zaghloul; Christoph T Weidemann; Gordon H Baltuch; Michael J Kahana
Journal:  Front Hum Neurosci       Date:  2014-09-09       Impact factor: 3.169

9.  Control of recollection by slow gamma dominating mid-frequency gamma in hippocampus CA1.

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  9 in total

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