Literature DB >> 2207080

Substitution of Tyr254 with Phe at the active site of flavocytochrome b2: consequences on catalysis of lactate dehydrogenation.

J Dubois1, S K Chapman, F S Mathews, G A Reid, F Lederer.   

Abstract

A role for Tyr254 in L-lactate dehydrogenation catalyzed by flavocytochrome b2 has recently been proposed on the basis of the known active-site structure and of studies that had suggested a mechanism involving the initial formation of a lactate carbanion [Lederer, F., & Mathews, F.S. (1987) in Flavins and Flavoproteins, Proceedings of the Ninth International Symposium, Atlanta, GA, 1987 (Edmondson, D.E., & McCormick, D.B., Eds.) pp 133-142, Walter de Gruyter, Berlin]. This role is now examined after replacement of Tyr254 with phenylalanine. The kcat is decreased about 40-fold, Km for lactate appears unchanged, and the mainly rate-limiting step is still alpha-hydrogen abstraction, as judged from the steady-state deuterium isotope effect. Modeling studies with lactate introduced into the active site indicate two possible substrate conformations with different hydrogen-bonding partners for the substrate hydroxyl. If the hydrogen bond is formed with Tyr254, as was initially postulated, the mechanism must involve removal by His373 of the C2 hydrogen, with carbanion formation. If, in the absence of the Tyr254 phenol group, the hydrogen bond is formed with His373 N3, the substrate is positioned in such a way that the reaction must proceed by hydride transfer. Therefore the mechanism of the Y254F enzyme was investigated so as to distinguish between the two mechanistic possibilities. 2-Hydroxy-3-butynoate behaves with the mutant as a suicide reagent, as with the wild-type enzyme. Similarly, the mutant protein also catalyzes the reduction and the dehydrohalogenation of bromopyruvate under transhydrogenation conditions.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1990        PMID: 2207080     DOI: 10.1021/bi00479a008

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

1.  On the reaction mechanism of L-lactate oxidase: quantitative structure-activity analysis of the reaction with para-substituted L-mandelates.

Authors:  K Yorita; K Janko; K Aki; S Ghisla; B A Palfey; V Massey
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

2.  Epitope mapping for the monoclonal antibody that inhibits intramolecular electron transfer in flavocytochrome b2.

Authors:  K H Diêp Lê; Martine Mayer; Florence Lederer
Journal:  Biochem J       Date:  2003-07-01       Impact factor: 3.857

3.  Extreme pKa displacements at the active sites of FMN-dependent alpha-hydroxy acid-oxidizing enzymes.

Authors:  F Lederer
Journal:  Protein Sci       Date:  1992-04       Impact factor: 6.725

4.  Low-spin bis(2-methylimidazole)(octaethylporphyrinato)iron(III) chloride (perp-[Fe(OEP)(2-MeHIm)(2)]Cl): a consequence of hydrogen bonding?

Authors:  Chuanjiang Hu; Bruce C Noll; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2006-11-27       Impact factor: 5.165

5.  Ligand orientation control in low-spin six-coordinate (porphinato)iron(II) species.

Authors:  Chuanjiang Hu; Bruce C Noll; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2005-06-13       Impact factor: 5.165

Review 6.  Combining solvent isotope effects with substrate isotope effects in mechanistic studies of alcohol and amine oxidation by enzymes.

Authors:  Paul F Fitzpatrick
Journal:  Biochim Biophys Acta       Date:  2014-10-30

7.  Relative axial ligand orientation in bis(imidazole)iron(II) porphyrinates: are "picket fence" derivatives different?

Authors:  Jianfeng Li; Smitha M Nair; Bruce C Noll; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2008-03-20       Impact factor: 5.165

8.  L-mandelate dehydrogenase from Rhodotorula graminis: comparisons with the L-lactate dehydrogenase (flavocytochrome b2) from Saccharomyces cerevisiae.

Authors:  O Smékal; M Yasin; C A Fewson; G A Reid; S K Chapman
Journal:  Biochem J       Date:  1993-02-15       Impact factor: 3.857

9.  Mechanistic and structural studies of H373Q flavocytochrome b2: effects of mutating the active site base.

Authors:  Chi-Lin Tsai; Kuppan Gokulan; Pablo Sobrado; James C Sacchettini; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2007-06-12       Impact factor: 3.162

10.  On the rate of proton exchange with solvent of the catalytic histidine in flavocytochrome b2 (yeast L-lactate dehydrogenase).

Authors:  A Balme; F Lederer
Journal:  Protein Sci       Date:  1994-01       Impact factor: 6.725

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