Literature DB >> 22070325

Phase diagram of polypeptide chains.

Stefan Auer1.   

Abstract

We use a coarse grained protein model that enables us to determine the equilibrium phase diagram of natively folded α-helical and unfolded β-sheet forming peptides. The phase diagram shows that there are only two thermodynamically stable peptide phases, the peptide solution and the bulk fibrillar phase. In addition, it reveals the existence of various metastable peptide phases. The liquidlike oligomeric phases are metastable with respect to the fibrillar phases, and there is a hierarchy of metastability. The presented phase diagram provides a solid basis for understanding the assembly of polypeptide chains into the phases formed in their natively folded and unfolded conformations.

Mesh:

Substances:

Year:  2011        PMID: 22070325     DOI: 10.1063/1.3656764

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

1.  Nucleation of polymorphic amyloid fibrils.

Authors:  Stefan Auer
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

2.  Thermodynamic phase diagram of amyloid-β (16-22) peptide.

Authors:  Yiming Wang; Samuel J Bunce; Sheena E Radford; Andrew J Wilson; Stefan Auer; Carol K Hall
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-23       Impact factor: 11.205

Review 3.  Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.

Authors:  Phuong H Nguyen; Ayyalusamy Ramamoorthy; Bikash R Sahoo; Jie Zheng; Peter Faller; John E Straub; Laura Dominguez; Joan-Emma Shea; Nikolay V Dokholyan; Alfonso De Simone; Buyong Ma; Ruth Nussinov; Saeed Najafi; Son Tung Ngo; Antoine Loquet; Mara Chiricotto; Pritam Ganguly; James McCarty; Mai Suan Li; Carol Hall; Yiming Wang; Yifat Miller; Simone Melchionna; Birgit Habenstein; Stepan Timr; Jiaxing Chen; Brianna Hnath; Birgit Strodel; Rakez Kayed; Sylvain Lesné; Guanghong Wei; Fabio Sterpone; Andrew J Doig; Philippe Derreumaux
Journal:  Chem Rev       Date:  2021-02-05       Impact factor: 60.622

4.  Amyloid Aggregation under the Lens of Liquid-Liquid Phase Separation.

Authors:  Yanting Xing; Aparna Nandakumar; Aleksandr Kakinen; Yunxiang Sun; Thomas P Davis; Pu Chun Ke; Feng Ding
Journal:  J Phys Chem Lett       Date:  2020-12-24       Impact factor: 6.475

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.