Literature DB >> 22069063

Silencing disease genes in the laboratory and the clinic.

Jonathan K Watts1, David R Corey.   

Abstract

Synthetic nucleic acids are commonly used laboratory tools for modulating gene expression and have the potential to be widely used in the clinic. Progress towards nucleic acid drugs, however, has been slow and many challenges remain to be overcome before their full impact on patient care can be understood. Antisense oligonucleotides (ASOs) and small interfering RNAs (siRNAs) are the two most widely used strategies for silencing gene expression. We first describe these two approaches and contrast their relative strengths and weaknesses for laboratory applications. We then review the choices faced during development of clinical candidates and the current state of clinical trials. Attitudes towards clinical development of nucleic acid silencing strategies have repeatedly swung from optimism to depression during the past 20 years. Our goal is to provide the information needed to design robust studies with oligonucleotides, making use of the strengths of each oligonucleotide technology.
Copyright © 2011 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

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Year:  2011        PMID: 22069063      PMCID: PMC3916955          DOI: 10.1002/path.2993

Source DB:  PubMed          Journal:  J Pathol        ISSN: 0022-3417            Impact factor:   7.996


  175 in total

1.  Theoretical and experimental approaches to design effective antisense oligonucleotides.

Authors:  G Sczakiel
Journal:  Front Biosci       Date:  2000-01-01

2.  HD Therapeutics - CHDI Fifth Annual Conference.

Authors:  Keith T Gagnon
Journal:  IDrugs       Date:  2010-04

Review 3.  Delivery of siRNA therapeutics: barriers and carriers.

Authors:  Jie Wang; Ze Lu; M Guillaume Wientjes; Jessie L-S Au
Journal:  AAPS J       Date:  2010-06-11       Impact factor: 4.009

4.  Pharmacokinetics of phosphorothioate antisense oligodeoxynucleotides.

Authors:  R S Geary; R Z Yu; A A Levin
Journal:  Curr Opin Investig Drugs       Date:  2001-04

5.  Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs.

Authors:  Jürgen Soutschek; Akin Akinc; Birgit Bramlage; Klaus Charisse; Rainer Constien; Mary Donoghue; Sayda Elbashir; Anke Geick; Philipp Hadwiger; Jens Harborth; Matthias John; Venkitasamy Kesavan; Gary Lavine; Rajendra K Pandey; Timothy Racie; Kallanthottathil G Rajeev; Ingo Röhl; Ivanka Toudjarska; Gang Wang; Silvio Wuschko; David Bumcrot; Victor Koteliansky; Stefan Limmer; Muthiah Manoharan; Hans-Peter Vornlocher
Journal:  Nature       Date:  2004-11-11       Impact factor: 49.962

Review 6.  Synthetic agonists of Toll-like receptors 7, 8 and 9.

Authors:  S Agrawal; E R Kandimalla
Journal:  Biochem Soc Trans       Date:  2007-12       Impact factor: 5.407

7.  Enhancement of strand invasion by oligonucleotides through manipulation of backbone charge.

Authors:  S V Smulevitch; C G Simmons; J C Norton; T W Wise; D R Corey
Journal:  Nat Biotechnol       Date:  1996-12       Impact factor: 54.908

Review 8.  Telomerase and cancer therapeutics.

Authors:  Calvin B Harley
Journal:  Nat Rev Cancer       Date:  2008-03       Impact factor: 60.716

9.  Challenges to oligonucleotides-based therapeutics for Duchenne muscular dystrophy.

Authors:  Aurélie Goyenvalle; Kay E Davies
Journal:  Skelet Muscle       Date:  2011-02-09       Impact factor: 4.912

10.  Down-modulation of cancer targets using locked nucleic acid (LNA)-based antisense oligonucleotides without transfection.

Authors:  Y Zhang; Z Qu; S Kim; V Shi; B Liao; P Kraft; R Bandaru; Y Wu; L M Greenberger; I D Horak
Journal:  Gene Ther       Date:  2010-12-23       Impact factor: 5.250

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  142 in total

Review 1.  Modulation of hepcidin to treat iron deregulation: potential clinical applications.

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2.  Synthesis and properties of 2'-deoxy-2',4'-difluoroarabinose-modified nucleic acids.

Authors:  Saúl Martínez-Montero; Glen F Deleavey; Arden Dierker-Viik; Petra Lindovska; Tatiana Ilina; Guillem Portella; Modesto Orozco; Michael A Parniak; Carlos González; Masad J Damha
Journal:  J Org Chem       Date:  2015-03-05       Impact factor: 4.354

Review 3.  Improving Molecular Therapy in the Kidney.

Authors:  Jeffrey D Rubin; Michael A Barry
Journal:  Mol Diagn Ther       Date:  2020-08       Impact factor: 4.074

Review 4.  Allele-selective inhibition of trinucleotide repeat genes.

Authors:  Masayuki Matsui; David R Corey
Journal:  Drug Discov Today       Date:  2012-01-18       Impact factor: 7.851

Review 5.  Strategies, design, and chemistry in siRNA delivery systems.

Authors:  Yizhou Dong; Daniel J Siegwart; Daniel G Anderson
Journal:  Adv Drug Deliv Rev       Date:  2019-05-15       Impact factor: 15.470

6.  Concurrent Hydrogenation of Three Functional Groups Enables Synthesis of C3'-Homologated Nucleoside Amino Acids.

Authors:  Venubabu Kotikam; Eriks Rozners
Journal:  Org Lett       Date:  2017-07-21       Impact factor: 6.005

7.  Enhancer RNA facilitates NELF release from immediate early genes.

Authors:  Katie Schaukowitch; Jae-Yeol Joo; Xihui Liu; Jonathan K Watts; Carlos Martinez; Tae-Kyung Kim
Journal:  Mol Cell       Date:  2014-09-25       Impact factor: 17.970

Review 8.  Targeting RNA in mammalian systems with small molecules.

Authors:  Anita Donlic; Amanda E Hargrove
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-05-03       Impact factor: 9.957

9.  Synthesis, biophysical studies and RNA interference activity of RNA having three consecutive amide linkages.

Authors:  Paul Tanui; Scott D Kennedy; Benjamin D Lunstad; Amanda Haas; Devin Leake; Eriks Rozners
Journal:  Org Biomol Chem       Date:  2014-02-28       Impact factor: 3.876

10.  Targeted p21WAF1/CIP1 activation by RNAa inhibits hepatocellular carcinoma cells.

Authors:  Mika Kosaka; Moo Rim Kang; Glen Yang; Long-Cheng Li
Journal:  Nucleic Acid Ther       Date:  2012-08-21       Impact factor: 5.486

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