Literature DB >> 15659338

The implications of structured 5' untranslated regions on translation and disease.

Becky M Pickering1, Anne E Willis.   

Abstract

Translational control is a key step in eukaryotic gene expression. The majority of translational control occurs at the level of initiation, thus implicating the 5' untranslated region as a major site of translational regulation. Many growth-related mRNAs have atypical 5' UTRs, which are often long and GC-rich. Such features promote formation of stable secondary structure, and many mRNAs encoding proteins involved in cell growth, proliferation and apoptosis have structured 5' UTRs, which in many cases harbour internal ribosome entry sites (IRESs) and upstream open-reading frames (uORFs). In this review we discuss how secondary structural elements in the 5' UTR can regulate translation and how mutations that perturb these secondary structural elements can have implications for disease and tumourigenesis.

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Year:  2004        PMID: 15659338     DOI: 10.1016/j.semcdb.2004.11.006

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  162 in total

1.  Translational repression of the disintegrin and metalloprotease ADAM10 by a stable G-quadruplex secondary structure in its 5'-untranslated region.

Authors:  Sven Lammich; Frits Kamp; Judith Wagner; Brigitte Nuscher; Sonja Zilow; Ann-Katrin Ludwig; Michael Willem; Christian Haass
Journal:  J Biol Chem       Date:  2011-11-07       Impact factor: 5.157

2.  Genomic variation in natural populations of Drosophila melanogaster.

Authors:  Charles H Langley; Kristian Stevens; Charis Cardeno; Yuh Chwen G Lee; Daniel R Schrider; John E Pool; Sasha A Langley; Charlyn Suarez; Russell B Corbett-Detig; Bryan Kolaczkowski; Shu Fang; Phillip M Nista; Alisha K Holloway; Andrew D Kern; Colin N Dewey; Yun S Song; Matthew W Hahn; David J Begun
Journal:  Genetics       Date:  2012-06-05       Impact factor: 4.562

3.  5'-3'-UTR interactions regulate p53 mRNA translation and provide a target for modulating p53 induction after DNA damage.

Authors:  Jing Chen; Michael B Kastan
Journal:  Genes Dev       Date:  2010-09-13       Impact factor: 11.361

4.  A novel blast resistance gene, Pi54rh cloned from wild species of rice, Oryza rhizomatis confers broad spectrum resistance to Magnaporthe oryzae.

Authors:  Alok Das; D Soubam; P K Singh; S Thakur; N K Singh; T R Sharma
Journal:  Funct Integr Genomics       Date:  2012-05-17       Impact factor: 3.410

5.  The structure of the 5'-untranslated region of mammalian poly(A) polymerase-alpha mRNA suggests a mechanism of translational regulation.

Authors:  Aikaterini Rapti; Theoni Trangas; Martina Samiotaki; Panayotis Ioannidis; Euthymios Dimitriadis; Christos Meristoudis; Stavroula Veletza; Nelly Courtis
Journal:  Mol Cell Biochem       Date:  2010-02-21       Impact factor: 3.396

6.  Significant associations of mismatch repair gene polymorphisms with clinical outcome of pancreatic cancer.

Authors:  Xiaoqun Dong; Li Jiao; Yanan Li; Douglas B Evans; Huamin Wang; Kenneth R Hess; James L Abbruzzese; Donghui Li
Journal:  J Clin Oncol       Date:  2009-02-23       Impact factor: 44.544

7.  Role of the highly structured 5'-end region of MDR1 mRNA in P-glycoprotein expression.

Authors:  Rebecca A Randle; Selina Raguz; Christopher F Higgins; Ernesto Yagüe
Journal:  Biochem J       Date:  2007-09-15       Impact factor: 3.857

8.  Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated.

Authors:  Sergey E Dmitriev; Dmitri E Andreev; Ilya M Terenin; Ivan A Olovnikov; Vladimir S Prassolov; William C Merrick; Ivan N Shatsky
Journal:  Mol Cell Biol       Date:  2007-04-30       Impact factor: 4.272

9.  The human L-type calcium channel Cav1.3 regulates insulin release and polymorphisms in CACNA1D associate with type 2 diabetes.

Authors:  T M Reinbothe; S Alkayyali; E Ahlqvist; T Tuomi; B Isomaa; V Lyssenko; E Renström
Journal:  Diabetologia       Date:  2012-11-15       Impact factor: 10.122

Review 10.  Applications of computational algorithm tools to identify functional SNPs.

Authors:  C George Priya Doss; C Sudandiradoss; R Rajasekaran; Parikshit Choudhury; Priyanka Sinha; Pragnya Hota; Udit Prakash Batra; Sethumadhavan Rao
Journal:  Funct Integr Genomics       Date:  2008-06-19       Impact factor: 3.410

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